Varanus komodoensis (Komodo dragon): 123022007
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Entry
123022007 CDS
T07701
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
123022007 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vko01009
]
123022007 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vko04515
]
123022007 (PCDH11X)
Protein phosphatases and associated proteins [BR:
vko01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123022007 (PCDH11X)
Cell adhesion molecules [BR:
vko04515
]
Cadherins
Protocadherins
123022007 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
Big_9
DUF6249
Motif
Other DBs
NCBI-GeneID:
123022007
NCBI-ProteinID:
XP_044283290
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MDLLSGTYLLAVLLVCIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNEQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GNPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSSQISSLAKRLFAIDNSTGLITIKQPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNIPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYETTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPVIGLSIPENNAPGTQLTKISATDADSGHNAEISYMLGLDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFMVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGKDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVMPSSNYSYDLVPMSTSPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNVTLKEKVISADHGLHRLVIKVNDLGQPESLYT
IALVHLFINETVTNGSYIQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKSKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQAGFKTPGS
IHTRQHSKEAGRPQTPLKETSLESWTQPQSQRRVTFHLPDGSQESCSDSGLGDHEPSSTT
STSHPLPLGFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQCNPPLPAFGFQQGWGRGAMPEGRHTLGRPLPKDDTDKGQGGPRP
QFYNTCERHCTSDDPVKVIPLANFIPAQTTSVSGSSATLIHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctttctgggacctacctcttggcagtcttactagtctgcatcgtgttccag
tctggtgctcaggagaagaattatacagtgcgggaggagctgccagaaaatgtcttaatt
ggcaatttgcttaaagacctcaacttgactctggatcccgatgtacctctttcatcacca
ctccagttcaagcttgtgtacaagaccggggatgtgcctctggtccgtgtggaggagaat
actggagaaatattcaccactgccaaccgcattgatcgggaaaagctttgttctggcatt
tttagtgagaatcgttgtttttatgaggtggaagttgctgtcctacctgatgaagttttc
aggctagtcaagattaggttcctgattgaggatataaatgacaatgcccctctttttcca
tcgacagtcattaatatctccatccctgagaacacagccatcaattcacggtattctgtc
ccatctgctattgatcctgacattggagtgaatggcattcagcactatgaacttcttaag
cctaaaacagctccgaaaaggacttttggatccattacaaatgaacagggtcaaaatgta
tttggactcgacataattgagacacctgagggggacaaatggccccagctgatagtgcag
cagatccttgacagggagcagaaagacacctatgtgatgaagattaaagtggaagatggc
ggaaaccctccacgatccagcactgccatcctccaagtcacggtcactgatgtcaacgac
aaccgccctgtattcaaggagaatgacattgaagtcagtgttcctgagaatgcccccgtg
ggcacctccgtgtctcagctccatgccactgatgctgacctggggtccaacgcccagatc
cacttctacttcagcagccagatctcgagcttggccaaaagactctttgccattgataac
tccactggtctcatcaccatcaagcagccactggaccgggaggaatccccagtgcacaag
ctaacagttctagcgagcgatggcagctcaacaccctcgagagcaacggtgacagtgaat
gtcacagacattaacgataacattccatcaatagacacgaggtacattatcaatccagtg
aatgggactgttcttttgtcagagaaagcaccactcaatactaaaattgcacttattaca
gtaatggataaggatgctgaccttaatggtaaagtgacctgcttcacagaccatgatgtg
ccattcaggttaaagcctgtatttgataatcagttcctgctggagacagccactttcctg
gactatgagactacccgggaatatgctatcaaaatagtggcttctgattcagggaagcca
ccattgaaccagtctgcaatgctccttatcaaaatcaaggatgagaatgacaatgcccca
gtattcacacagcctgtcattggactttccatcccagagaacaatgctcctggcacccag
ctgaccaagatcagtgctacagatgcagacagtggacacaatgctgagatcagctacatg
ctgggcttggatgcaccccccattttcaacctggaccgccgtacaggcattctgactgca
gtgaggaagctggaccgggaaaagcaggaccggtattcgttcatggtgctggcaaaagat
aatggcatgccacccttgcagaccaatgctacagtgacagtttcagtcttggaccaaaat
gacaacagccctgctttcacacacaacgagtataatttctacgtgcccgaaaacctcccc
atgtatggcactgttgggctgatcactgtgacggatgcagactctggagagaacgccgca
gtgaccttgtctatattaaatggcaaggataatttcattattgatcccctcacaggagtc
ataaggcctaatattacctttgacagggagcagcaaggatcttatacctttcaggtgaag
gctgtggatggaggaaggctacaacgctcatcaactgccaaagtgactatcaacgtggtt
gatgtcaatgacaacaggcctgtatttgtcatgccctcatctaactactcatatgacttg
gttccgatgtccacaagcccaggttctgtagtgacaaaggtattcgctgttgacaatgat
acggggatgaatgctgaacttcgctacagcatcataggtggaaattcaaggggcttgttt
acaatcgaccaattaacgggcaatgttactttgaaagagaaagtcatatcagcagatcat
gggctgcacagactggtgatcaaagtcaatgatttaggacagccagagtcgctgtacact
atagctctggtgcatttgtttatcaacgaaacggttaccaatggatcatacatccaagag
ttagtgcgtcggaacatggaaacaccagttggccagaacgttggagatggtgagataacc
ccacagacaaatgactatgtcaagataataattgccatcattgcaggaaccatgacagtc
attctggtcatcttcgtgactgctctagtgcgatgccgccaaaccccaaggcataaggtt
gtccagaagagcaagcaaagtggggaatgggtctccccaaaccaagaaaaccgtcagatc
aagaaaaagaagaagaagaagaagcgctctccaaaaagccttctcctcaactttgtgacc
attgaagaatctaagcccgatgatcctggccatgaacacatcaatggcactttggacatt
cctgtagagcttgaagaacagactatgggaaaatataactgggccaccacaccaaccacc
tttaagcctgacagcccagatttagcaaagcactacaagtcagcctccccacaacccact
tttcaaattaaacctgagactccagtgcccccgaagaaacatcacgtcattcaggaactg
cctctggataacacctttgtggtgggctgtgactcactctccaagtgttcttccagtagc
tcggacccttacagtgtctctgaatgtagctgccaggcaggattcaagactccaggctcc
atccacaccagacagcattcaaaagaggcgggaagaccccagacaccactgaaagagaca
agcctggaatcatggactcagccacagtcacagcgccgagttacatttcacctgcccgat
ggctcacaggaaagctgcagtgacagtgggctaggagaccacgagcccagcagcaccaca
agcacttcacatcctttaccccttggtttcccacaagaggaatactatgaacagacatcg
cccaacagtcggacagagggagatggcaattcggatccagagtccactattgaggtgaac
ctccagaaagctcttgctgaagcttctgaaacctgcactcaggaatgcctcatcctcggc
cattctgacaattgctggatgcctccttcgttgacacagtaccagcaatgcaaccctcct
ttgccagcctttggcttccagcaaggatggggtcgaggagccatgccagagggaagacac
acccttggaaggccccttcccaaggatgatactgacaaaggccaaggcgggccccggcct
cagttctacaacacctgtgaaagacattgcaccagcgacgacccagtcaaagttattcct
cttgcaaacttcatccctgcccagacgacctctgtgtctgggagcagcgccactttgatc
catgagcaccagctataa
DBGET
integrated database retrieval system
