Varanus komodoensis (Komodo dragon): 123022143
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Entry
123022143 CDS
T07701
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123022143 (FOCAD)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123022143 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
123022143
NCBI-ProteinID:
XP_044283515
Ensembl:
ENSVKKG00000014756
LinkDB
All DBs
Position
Unknown
AA seq
1803 aa
AA seq
DB search
MSEEIRKRLDFPNTLIQSQTVGHLIAAVLKENVSSNKISQSSNQTPALNLLWENCCSDNV
VVRTACCEALVALVSQDHAEPSYVLNGALNLIPSARNVQGLIKIIVKLLQRQSLKVAKSG
EEQLSESYAVRNSPQPLITVLENRPDCWPVLLQQITAFFQQCPESLESSYVSIMRPFLRY
LYCEPCQVREHAELRMSLLRVLLQPRGPWNKEEPPVLECELLQLFCDLVPYCQIQDLPQV
TEMLLFLEALFQSLLRYPVFWKAQLHQLCLQCLCFCEVCLQSTGECSTLICIMEENVELL
KEGFPFEMALIGLGLLLLQAPASQQKPMLMLAIKLLSCSETGTTLAAAPVLVMPALQILS
STAVQNCLAEEDSGTTRQQLAINLLETVQQEEWKEQKQLASGSCFFPITSTYGPLHATWR
FLALVRDQSSTSDWLSSVKSMLPITTQVPVHVFLLLAYLLVRENGDSLRGVLAATTEVAK
ADSSQVPNLIPVLMFRLGKPLEPTLCRDVLYALPALGVHKVCVAQILRALQVLGSTPKLQ
AVTLRLMTSLWEKQDRVYPELQRFMTMSDLASFSVSKDTQWEKVIAKAASIRDICKQRPY
QHGADMLVAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNSNEYEKFKAQVVSFLWSHTQNKDPLVATSAYISLSQFGSA
EHTILHLPEQARPELDHDEEMDITEEDGDEEEVDLSVPGASYIKLMSLTPPSVFPAFEEF
AASLVKQEMANMPRGIYHSALRGSAVRSDQGKTVSGVPNFMLKMYERNKQPGLKPGLAAG
MLLSYDLPIHVGKDGKPISRFLASRGRNFQQMLVALIHEVNIQPSEWHRSLLLPQSWAGF
MERAYHAILQGRQAELEMQLKHGKEGPEEVQYKQFTAWLWVRDMLTDVIKGASKESPVVK
GNCLLALTGLVVAVAKHEKGLSSDTEEQVDTEPDFLLTKHWISMVIDTLLSIVDSHYRPK
GRVFPWFYQKSYSGENTASAIARSCAATALSLLVPVFIVSYKEKVEEVLNVLIAMLPGKP
NADESQAVQIHMGLALGMFISRLCEEKVSEVSGKQLNLLLSKSLDALEKCCFDTSLEYNT
GCILGVGLALSLMSHSNLTDSQGHISASLCKLSKYLDDAEDQSRTFQEILAYAVACVCVS
AFSVKIIEATEAEQIMNKLQNLAETNQQTPGFALALGSIVHGLSICGHGKAEDLGNRLFP
AWMKTVLVEGAPTIQRLAAVNGLVSLVGSEGAMIQLRSEASQSSQFQSKLNEVIRTLSQI
ISFSGVIGLQTNAAWLLGHLHLSSVSATHSRTSVPVDFSYLPEKSFLRAAIDFVIEGGKK
GPEQVHPHLVKVVMAPIALIGESYQYPPVNWASILSPILRLNFGEELQQLCLEVAATQAQ
SSQNAAILLGMWVAPPLVYSLSIKTKRYLFTSLPVWMKYVAEDKLQAFTEMFMVQHFEAK
DQPKHLELCHNILQGLSQAMKLPSPAQYSWSCLCRTAERIFELLPNEIRQNEVKIYIDAA
KCLSEMADTEIDRILQVSKNNLDKVTFVKVYLVSQGRFPLLKWNDTITIAAGCEQNETVV
WMLLHSFYHARIVSHENTGVIRRMEWLLELMGYIRNVSLKATSIQNVAPTEAVNFLLWIF
AASVVVWADHAAPLLLGLTADWSSWECEATSGLSESCLGKRQIDNLAVQEILILFPGSLQ
VLLAKEPWKEQSQKFIEWMFSIMESANEVLSQSSRDLLKASLLALRSLPEFKKKAVWTKA
YGW
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaatcagaaaaaggttggattttcctaacactctgatacagtcacagact
gtgggccatctgattgctgcagtgctgaaagaaaatgtttcatccaacaagataagccag
tcctctaaccagactcctgccctaaacttgctgtgggaaaattgctgcagcgacaatgtg
gttgtcaggacggcgtgctgtgaggcgcttgtggcacttgtttcccaggatcatgcagag
ccaagttacgttcttaatggagctctcaacctgattccttctgccaggaatgtgcaaggt
ttgataaaaatcatagtaaaactactacagagacagtccctgaaggtggcaaaaagtgga
gaggaacaactgtcagagtcatatgcagtcagaaactctcctcaacccctgatcactgtt
cttgaaaacagacctgattgctggccagttctcctgcagcagattacagcatttttccag
cagtgtccagaaagcttggaaagctcatatgtctccataatgagaccatttctcaggtac
ctatactgtgagccctgccaggtacgggagcatgccgaattacgaatgagtctgcttagg
gtcttgctgcagcctcgtggtccttggaacaaagaggagccccccgtccttgagtgtgag
ctccttcagctcttctgtgacttggttccatactgtcagatacaagacctcccccaggtc
acagaaatgctgctttttctggaggcgctattccagagtctgctgcgctaccctgtcttt
tggaaagcccagttacaccaactctgcctacagtgtctctgcttctgtgaagtctgccta
cagagtacaggggaatgttcaactttaatttgcataatggaagaaaatgtggagctcttg
aaagagggttttccatttgagatggccttaattggattagggctgctcttgctgcaggcc
cctgcgagtcagcagaagccaatgttaatgctagccatcaagctcctttcctgttctgaa
actgggacaactctggcagcggctccagtcctggtgatgcctgcgctgcagatcttatcc
tccacagctgtacagaactgcctggctgaggaggatagtggcactaccaggcagcagttg
gccattaatcttctggaaaccgtacagcaggaagaatggaaagaacaaaaacaattggcc
tctggttcctgtttcttccccataaccagcacttatggtccattgcatgctacttggagg
ttccttgcacttgtgagagaccagtcttccacatctgactggttatcttcagtgaagtcc
atgctgcccatcacaactcaagtccctgtccacgtgtttcttctgctggcctacctcctt
gttcgagaaaatggagacagcctccgtggcgtgttggctgccactactgaagttgccaaa
gcagattcatctcaggtgccaaatctcattccagttctgatgttcagactgggaaagcca
ctggagccgacattatgccgggatgtcttgtatgctttacctgctttgggagtgcacaag
gtctgtgtggcacagattttacgtgcactgcaggtgttgggaagcacaccaaaacttcaa
gctgttacattacgactgatgacatctttatgggaaaaacaggaccgagtttacccagaa
ctacagagattcatgacaatgtctgatctggcttccttctctgttagtaaagatactcag
tgggaaaaggtgattgccaaagctgcttctatccgagatatatgtaaacaaaggccttac
caacatggggcagatatgttggttgcaatttcccaggtattgaatgaatgcacaaaacct
gatcaagccacacctgctgctttagtcttacaaggactccatgcactttgtcaagctgag
gtcgtttgtattcgctctacatggaatgcgctctcaccaaagttgagctgcgacacccgg
ccactcattttaaaaacactgagtgaactattttcccttgtcccttctttaactgtgaat
tcaaatgaatatgagaaatttaaagctcaagttgtcagtttcctgtggagccatacacag
aacaaggatcctctcgtagccacctctgcatacatctctctctctcagtttggttctgca
gaacataccatacttcatcttcctgaacaggcaaggccagagttagaccatgatgaagaa
atggatatcactgaagaggacggagatgaggaagaggtggatctctctgttcctggtgct
tcatatatcaaattgatgtcactcactcccccttctgtttttccagcatttgaagagttt
gcagcatcgcttgtgaaacaggagatggccaatatgcctcgtggaatataccattctgcg
ctgagaggaagtgcggttcgatcagatcaagggaagactgtatcaggggttccaaacttc
atgttgaaaatgtatgagaggaataagcagccagggctaaagcctggccttgcagctggc
atgttgttgagctatgatcttccaatccatgtgggtaaggatggcaaacctatcagtcgg
tttctagccagtcgggggcgcaacttccagcagatgttagtagcgcttatccatgaggta
aacattcagccttcagaatggcaccgctctctgctgctgcctcagtcctgggcaggattt
atggagagagcctaccatgcaattttgcaaggaaggcaagctgagttggagatgcagtta
aagcatggaaaagagggacccgaagaagtgcaatacaaacaatttacagcctggctctgg
gtcagagatatgttgactgatgttatcaagggtgcttctaaggaaagcccagtggtaaaa
gggaattgccttctagctttaacaggccttgtggttgctgtagcaaaacatgagaaaggg
ctctcttcagacactgaagaacaagttgacactgagccagactttcttctgacaaagcac
tggatctccatggtgatagatacgctccttagcattgtagacagtcactatcgccccaag
ggtcgtgtcttcccatggttttatcagaaatcctattctggtgaaaataccgcgagtgct
attgctcgttcctgtgcagcgactgctttgtctctcttggtgccggtttttattgtatcc
tacaaggaaaaggttgaggaagtcctgaatgtactgattgccatgttacctgggaaacca
aatgcagatgagtctcaggctgttcaaattcacatgggcctcgctttggggatgtttatt
tcacggttatgtgaagagaaagtcagtgaagtttctggcaaacaactgaatcttttactt
tcaaagtctctggatgcattagagaaatgctgctttgacacgagtctagaatacaacact
ggatgcatcttgggagtaggacttgctctgtcactgatgagtcacagcaacttgacagat
tcccaaggtcacatctctgcttccttgtgtaaacttagcaaatacttggatgatgcagaa
gatcagagcagaacattccaagaaattcttgcctatgcggttgcctgtgtctgtgtttcc
gctttcagtgtaaagatcattgaggccacagaggctgagcagataatgaacaagttgcag
aacttagcagaaacaaatcagcagactcctggcttcgccttagcactgggtagcattgtt
catgggttgtctatatgcggacatggtaaagcagaagatcttggcaacagactgtttcct
gcctggatgaaaactgtacttgtagagggggcccctacaattcagcggcttgcagcagtc
aatgggctggtctctctggtaggttccgaaggagccatgatacagctgaggtctgaggct
agccagtcttctcagttccagagcaagcttaatgaagtcatcagaaccttgagtcagata
atcagtttttctggggtgattggccttcagacaaacgcggcgtggctactggggcacctg
catctctctagtgtgtctgcaacccatagtcggacatctgttcctgtggacttcagctac
ctgcctgagaaaagctttcttagagcagccattgactttgttattgaaggtggaaagaaa
ggccctgaacaagttcatccacacttggtaaaggtagtcatggcacccatagcattaatt
ggagaaagttaccaatatccacctgtgaactgggcatcaattctttccccgatattgcga
ctaaattttggagaagagctgcagcagctgtgccttgaagtagccgcgacccaggcccag
tcatcacagaacgctgccattctcttggggatgtgggtagcaccacctctagtatacagt
ctaagtataaaaaccaagagataccttttcacttccttgcctgtgtggatgaaatatgta
gcagaagacaaactgcaggctttcacagaaatgtttatggtgcaacactttgaagcaaag
gaccagccgaaacacctggagctttgccacaatattttacaggggctcagccaagccatg
aaacttcctagccctgcccagtacagctggagctgtctttgcaggactgctgagagaata
tttgagcttttgccaaatgagattcggcaaaacgaagtgaagatatatatagatgcagca
aagtgtctttcagaaatggcagatacagaaattgaccgaattttacaagtttcaaagaac
aatttggacaaggtcacatttgtcaaagtttatttagtttctcagggcagatttccttta
ctgaaatggaatgatacgattactattgcggctggttgcgaacagaacgaaactgttgta
tggatgctgctgcacagcttttaccatgcccggattgtgagccatgaaaacacgggagtc
ataaggagaatggagtggcttttggaactgatggggtatattagaaatgtatctttaaag
gcaacatctatacaaaatgtggctcccacagaggctgtcaacttcctgttgtggattttt
gctgcctctgtggttgtgtgggccgaccatgctgcaccactgctgctgggcctcactgct
gactggtcttcctgggaatgtgaggcaacttccggattatctgagagttgtctgggcaag
cgtcaaatagataatctggctgtccaagagattctcatcctttttccaggtagcttacaa
gttctgttggctaaagagccttggaaagaacaatcacaaaagtttattgagtggatgttt
agcataatggagagtgcaaatgaagtactgtcccagtcttctagagatcttttgaaagct
tctctattggccctgaggtctttgccagaattcaagaagaaggcagtatggacgaaggct
tatggatggtaa
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integrated database retrieval system