Varanus komodoensis (Komodo dragon): 123022669
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Entry
123022669 CDS
T07701
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03013
Nucleocytoplasmic transport
vko03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123022669 (UPF3A)
03015 mRNA surveillance pathway
123022669 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123022669 (UPF3A)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123022669 (UPF3A)
mRNA cycle factors
P-body specific factors
123022669 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
123022669
NCBI-ProteinID:
XP_044284480
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
METPLQRESPRRGPETPPQSPGPPPPPPPPPPPPPPPTSLGLPAGKQQREEKRAALSKVV
IRRLPPSFTKEQLEEQLHPLPAHDYFEFCTSDPSLYPHVYSRAYINFRNPDDILLFRDRF
DGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLETYCAEEEKI
CANPEILLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRESEKKRLRE
DEKRKRREEERRKRKDAEKQKKISEKEIRIKLLKKPEKGDEQATEKHREKEKAETEENKW
EKSPGHGSIKSKPLEGSLKEKSQNDSDKEQRDSERRFREKEPERQRYRLEDGRKHRTHYE
YDKFVRRNEDEVKWGKGYNQDRGKKVNYNYSFTVDTVDKLGKEDKCDDMASKKERIRNKD
RPAMQLYQPGVRIRTHTGSTSRSCDSAEKSSEEVYGRKYEADNSTGGGSEKSEDAE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcctcttcagcgggaatcgccgcgtcgggggccagagacccctccgcagtcc
ccggggccgccccctccgccgccgccgcccccgccgccgccgccgccacccaccagcctg
ggactgccggcgggcaaacaacagcgggaggagaaaagagcggcgctgagtaaagtggtt
atacgtcgcctacctcctagctttaccaaggaacagctggaggaacaactccatccactt
cctgctcatgattattttgaattttgtacctctgatcccagtctttatcctcatgtctac
tcaagagcatatattaattttagaaatcctgatgacatcctcctttttagagatcgcttt
gatggctatgtcttcattgacaataaaggtttagaataccctgctgttgttgaatttgca
ccgttccaaaagatttctaaaaagaagctgaagaagaaagatgcaaaagctggaagcata
gaagatgatccagaatacagaaaatttttagaaacttactgtgctgaggaagaaaaaata
tgtgccaaccctgaaatcctgctaggagaaattgaggcaaaaacaagggaactcattgct
agaaggacaacaccacttttggaatatattaaaaacaggaaattagaaaaacagaggatc
cgagaagagaaaagggaagagcgaaggaggagagaatcagaaaagaaacgtcttagagaa
gatgagaagcggaagcgtagagaagaggaaagacgtaaaagaaaagatgctgaaaagcaa
aagaaaatttctgaaaaagaaatacgaatcaagcttcttaaaaagcctgagaaaggagat
gagcaagccacagaaaagcacagagaaaaagaaaaagctgaaacagaagagaacaaatgg
gagaagtcaccagggcatgggagtataaaatctaagccactggaaggttcattaaaggaa
aaatcacaaaatgatagtgataaagagcaaagagattcagagagaagatttcgtgaaaaa
gagcctgagaggcaaaggtatcggttggaagatggtcgaaagcacagaactcactatgaa
tatgacaagtttgtgagaaggaatgaagatgaggtgaagtgggggaaaggatacaaccaa
gatcgagggaagaaagtgaactacaactacagcttcactgtggacacagtagacaaactg
ggtaaagaggacaagtgtgatgacatggcatccaaaaaggagcgcataagaaataaggat
cgaccagccatgcagctataccagccaggagttcgcattcgaacacatacggggtctaca
agtaggtcctgtgactctgctgaaaagtcttctgaagaggtttatggcagaaaatatgag
gcagacaattcaactggaggtggttctgagaagagtgaagatgcagaataa
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