Varanus komodoensis (Komodo dragon): 123022782
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Entry
123022782 CDS
T07701
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123022782 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vko03400
]
123022782 (MSH6)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123022782 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Gp44_lid
Motif
Other DBs
NCBI-GeneID:
123022782
NCBI-ProteinID:
XP_044284716
Ensembl:
ENSVKKG00000010122
LinkDB
All DBs
Position
Unknown
AA seq
1345 aa
AA seq
DB search
MSRQSSLLSFFPKSAKVEDDDDGGGGGGSSSSGGSPPSDLEGPPRASSRARGSTRGRTRA
PPTDCDCEFSPGDLVWAKLEGYPWWPCLVYRHPTEGTLFRGRGRASRIHVQFFDDDPSRG
WVSIRYIRPYTGSTGRDTQRGGMFYSSKPEIKRAMELADAALRKEKSERLDLAVCDKPSE
SEEEEEEEMEQVSDEGDEFDTAEEVKKSRNKRIAGRQKHDGKVKRRKVFIDSDSDNEGSD
MEFKPDQVSSDENSAGIGDSEASESETGPEKRVKHPVKVLSKHSPKQMQEKVYKPPQKDT
IKNNFPETPSREINLSSEIMYKLASFASPDCLDYRSTINGGGGDSSPTVWEHDKIDWLQD
GKRKDGHRRRQSDPDYDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDCVIFYKVGKFYEL
YHMDAVVGVNKLGLLFMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEAR
CKSLVHPTKFDRVVRREVCRIISKGTQTYSVLDGDYSDTHNRYLLCVKEKVDDSAGLHRT
YGVCFVDTTVGRFYLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKILKNLLPS
TVQEGLFAGSQFWTASKTLKALTEECYFQDKENVNSGLTLPPVIRSLTAENDSLGLTPGE
NGELALSALGGCVFYLKKCIIDQELLSMAKFEEYVPVDVDITKGMKSSNMFVKTSQRVVL
DGVTLANLEILQNGTTGSVEGTLLEKIDTCCTPFGRRLLKQWLCAPLCNPCTINDRLDAV
EDLLAEAAKMSEIRDLLKKLPDLERLLSKIHSIGSSLKNQNHPDNRAVLYEEARYSKKKI
IDFLSTLEGFKVVVEVISILEDIVDGFKSKTLKQIVTVKSKSPAGSFPDLKAELERWDAA
FDHNIARKTGVVNPKTGFDSDYDKALEDISDVEERLRQYLEKQRKRLGVRAMMYWGAGKN
RYQMEISETAVPRDLPDEYVLKSSRKGYKRYWTKDIEKMLNDIVNAEERRDAAQKNCMKR
LFYDFDKSSKDWQTAVECVAVLDVLLCLAHYSQGCDGPLCRPTIVLPENNTTPFLVLKRS
RHPCITKTFFGDDFIPNDILIGVQNEEANSESDACCVLVTGPNMGGKSTLMRQAGLLVIM
AQLGCFVPAESCTLTPVDRVFTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLMD
ELGRGTATFDGTAIASAVVKELSENIKCRTMFSTHYHSLVEDYSHSPSVKLGHMACMVEN
ESEDPSQETITFLYKFIKGACPKSYGFNAARLANIPEEVIQKGHKKAREFERAIFSLKVF
RNLCRIAEGAPATRNDLDKLIRLLG
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccaaagcagcctgctcagctttttccccaagtcggcgaaggtggaggacgac
gacgacggcggcggcggcggcggcagcagcagcagcggcggcagcccccctagcgatctc
gagggacctccgagggcctcgagccgagctcgcggcagcacccgcggcagaaccagggcg
ccgccgaccgattgtgactgtgaattttcacctggtgacttggtttgggctaaacttgaa
gggtacccttggtggccgtgcctcgtgtacagacatcccacagaaggaacacttttcaga
ggaagaggaagagcctctcgcatccatgtacagttttttgatgatgacccatcgaggggt
tgggttagcattagatacatacgaccatatacaggttctactggcagagatacccagaga
ggaggcatgttttacagttcaaagcctgagattaagagagcaatggaactggcagatgct
gctctgaggaaagagaaaagtgagcgacttgatcttgcggtatgtgacaaaccttcagaa
agtgaggaggaggaagaagaggagatggagcaggtgagtgatgaaggtgatgaatttgac
acagcagaggaagtgaaaaaaagtagaaataaaaggatagccggacgacagaagcatgat
ggaaaagtcaaaaggcggaaagttttcatagattcagacagtgataatgagggttcagac
atggaatttaagccagaccaagtcagcagtgatgaaaatagtgctggaataggtgacagt
gaggcatctgaatctgagactggcccagaaaagagagtgaaacatcctgttaaagtcctt
tctaaacactctcctaaacaaatgcaagaaaaggtatataaacctccccagaaggatact
attaaaaacaactttcctgaaacgcccagcagagaaatcaacctttcttctgagatcatg
tataaattagcatcttttgcatcacctgactgtctcgattatcgatcaactattaatgga
ggaggaggagattccagcccaactgtgtgggaacatgataaaattgattggctccaggat
ggtaaaaggaaagatggtcataggagacgacaaagtgacccagattatgatccgagtact
ctttttgtaccagaagactatcttaaaaactgtactcctggaatgcgaaagtggtgggag
cttaagagtcagaactttgactgtgtgattttctataaagttggaaagttctatgaattg
taccacatggatgctgttgttggggttaacaaacttgggctgttattcatgaaaggtact
tgggctcactcaggtttcccagaaatagcctttgacagattctccaatatcctagttcag
aaaggtcacaaagttgtccgtgttgagcagatggagactccagagatgatggaagctcgc
tgtaaatctttggttcacccgacaaaatttgacagggttgtacgccgagaagtatgtagg
ataatttccaaaggaacacaaacctacagtgttctggatggtgactattcagacacccac
aacagatacctgctttgtgtgaaagaaaaagttgatgattctgctggtcttcaccgtacc
tacggagtatgcttcgttgatacaacagtgggaaggttttatttgggtcagtttctggat
gatcgccattgctcaagatttagaacccttttggctcattatacacctgtgcagatcctt
tttgagcgagggaatccttctgcagaaacacagaagattctcaaaaacttacttccctct
actgtgcaggaaggtttgtttgctggctctcaattctggactgcatctaaaacactaaaa
gctctcactgaagaatgctatttccaggacaaggaaaatgtgaacagtgggctcactctg
cctccagtaatcagatccctgactgcagaaaatgattcgttgggacttactcctggggaa
aatggtgagcttgcgctctctgctcttggcggttgtgtcttctatcttaagaaatgcatt
attgaccaagaacttttatcaatggcaaaatttgaagaatatgttcctgtggatgttgat
attacaaaaggaatgaagtcaagtaatatgtttgttaaaacaagccagagagtggtgctg
gatggggtaactctagcaaacctggaaatactacagaatggaactactggttcggtagaa
ggcactttgctagaaaagattgacacttgttgtacaccctttggaaggagactcctaaag
caatggctctgtgcaccattgtgtaatccttgcactatcaatgaccgtttggatgcggtt
gaagacctcctagctgaggctgccaaaatgtctgaaatccgtgaccttctgaaaaaacta
ccagaccttgagaggcttttgagcaaaattcatagtattggatcttcacttaagaaccaa
aatcacccagataacagagccgttctctatgaagaggccaggtatagcaagaagaagatc
atagacttcttgtctacattagaagggtttaaagtagtagttgaagttatctcaattttg
gaagatattgtggatggttttaaatccaaaacactaaaacagatagtgactgtcaaatcc
aaaagccccgcaggctcttttccagacttaaaagcagaacttgaaaggtgggatgcagcc
tttgatcataacattgcacggaagactggtgtggttaatccaaaaactgggtttgactct
gattatgataaagcactggaggatataagtgatgttgaggaacgccttcgtcagtatcta
gaaaagcagcgcaaacggctgggtgtcagagctatgatgtactggggagcaggcaaaaac
cgctatcaaatggagatttcagagactgcagtgccaagggatttgcctgatgagtatgtg
ttgaagtcaagcagaaagggctataagcgatactggaccaaagacatagagaagatgcta
aatgatattgtcaatgctgaagagcgaagggatgcagcacagaaaaactgtatgaaaagg
ttgttctacgactttgataagagcagcaaagactggcaaacagcagtagaatgtgttgcg
gtactagatgtcctattgtgccttgcacattatagtcagggatgtgatggaccattgtgt
cgacctacaattgtgcttccggagaacaatactacaccttttctggtgctaaaacgctcc
cgccacccatgcattacaaaaacattctttggagatgacttcatccccaatgatatcctt
attggcgtacagaatgaagaggcaaattctgaaagtgatgcttgctgtgtgctagtgact
ggcccaaacatgggaggaaagtctacactcatgagacaggctggccttttggtaataatg
gcccagttgggatgctttgtacctgctgaatcttgcacgcttactcctgttgatagagtg
ttcaccagactaggggcttcagataggattatgtcaggggaaagtacattcttcgttgag
ctgagtgagacttcaagtatattacagcatgcaacagagcattccctggttcttatggat
gaactaggcagaggtacagctacatttgatggaactgctattgccagtgcagttgtcaaa
gaactgtcagagaatattaaatgccgcactatgttttcaacacattaccattctttagta
gaggattattctcatagtccctccgtgaagttgggacacatggcatgtatggtggaaaat
gaaagcgaggatcccagtcaagaaacaatcacattcctttacaaattcattaaaggggca
tgtcctaaaagctatggctttaatgcggcaaggcttgctaacattccagaagaagttatt
cagaaaggtcacaaaaaggcgagagagtttgagcgagctattttctccctgaaagtgttt
aggaacctttgccggatagctgaaggagcaccagcaaccagaaatgacctggacaaacta
attaggcttcttggttga
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