KEGG   Varanus komodoensis (Komodo dragon): 123023344
Entry
123023344         CDS       T07701                                 
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
vko  Varanus komodoensis (Komodo dragon)
Pathway
vko03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123023344 (PRPF38A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vko03041]
    123023344 (PRPF38A)
Spliceosome [BR:vko03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    123023344 (PRPF38A)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    123023344 (PRPF38A)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 123023344
NCBI-ProteinID: XP_044285865
Ensembl: ENSVKKG00000010823
LinkDB
Position
Unknown
AA seq 312 aa
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRYTGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDQLLHDERVCDIILPRLQKRYVLEEAEQLEPR
ISALEEDMDDVESSEDEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSLSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcaaaccggacagtaaaagatgcgcacagcatccacggcaccaacccgcagtacttg
gtggagaagatcattcgcacccgcatctatgagtctaagtactggaaagaagaatgtttc
ggcctcaccgctgaactggttgtggataaagctatggaactgagatatactggtggagtt
tatggtggaaacatcaagcctacaccattcttgtgcttgaccttgaagatgttgcagata
cagcctgagaaggacatcattgttgaatttataaagaatgaagacttcaaatatgtgagg
ttgctgggagcattgtatatgagactgactggtactgccatagactgttacaaatatctt
gaaccattgtacaatgattatcgaaaaataaaaagtcaaaatagaaatggagagtttgag
ctaatgcacgtggacgaattcattgatcaactacttcatgatgagcgtgtttgtgatatc
attttacccagactacagaaacgatacgttctagaagaagctgaacaactagagccacgg
attagtgctttggaagaggatatggatgatgtggagtctagtgaggatgaggaagaggag
gatgaaaagctggaaagagctccctcacctgatcacaggagaagaggctacagagatcta
gataaacctcgcaggtctccaaccctgcgttacaggagaagccgaagcagatctcctagg
aggcgaagccgatcaccgaagaggagaagtctatcaccacgccgggaaaggcatcgcagt
aagagcccaaggaggcaccgaagtagatctagagaaagacgccacagatcaagatctaaa
tcaccagggcatcatcgtagccacagacatcgcagccattccaagtccccagaaagatct
aaaaagagccataagaagagtcgtcgaggaaatgaatga

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