Varanus komodoensis (Komodo dragon): 123023344
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Entry
123023344 CDS
T07701
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123023344 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vko03041
]
123023344 (PRPF38A)
Spliceosome [BR:
vko03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123023344 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
123023344 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
123023344
NCBI-ProteinID:
XP_044285865
Ensembl:
ENSVKKG00000010823
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRYTGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDQLLHDERVCDIILPRLQKRYVLEEAEQLEPR
ISALEEDMDDVESSEDEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSLSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccggacagtaaaagatgcgcacagcatccacggcaccaacccgcagtacttg
gtggagaagatcattcgcacccgcatctatgagtctaagtactggaaagaagaatgtttc
ggcctcaccgctgaactggttgtggataaagctatggaactgagatatactggtggagtt
tatggtggaaacatcaagcctacaccattcttgtgcttgaccttgaagatgttgcagata
cagcctgagaaggacatcattgttgaatttataaagaatgaagacttcaaatatgtgagg
ttgctgggagcattgtatatgagactgactggtactgccatagactgttacaaatatctt
gaaccattgtacaatgattatcgaaaaataaaaagtcaaaatagaaatggagagtttgag
ctaatgcacgtggacgaattcattgatcaactacttcatgatgagcgtgtttgtgatatc
attttacccagactacagaaacgatacgttctagaagaagctgaacaactagagccacgg
attagtgctttggaagaggatatggatgatgtggagtctagtgaggatgaggaagaggag
gatgaaaagctggaaagagctccctcacctgatcacaggagaagaggctacagagatcta
gataaacctcgcaggtctccaaccctgcgttacaggagaagccgaagcagatctcctagg
aggcgaagccgatcaccgaagaggagaagtctatcaccacgccgggaaaggcatcgcagt
aagagcccaaggaggcaccgaagtagatctagagaaagacgccacagatcaagatctaaa
tcaccagggcatcatcgtagccacagacatcgcagccattccaagtccccagaaagatct
aaaaagagccataagaagagtcgtcgaggaaatgaatga
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