Varanus komodoensis (Komodo dragon): 123023660
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Entry
123023660 CDS
T07701
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123023660 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vko03041
]
123023660 (PRPF8)
Spliceosome [BR:
vko03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123023660 (PRPF8)
Complex C
U5 SnRNP specific factors
123023660 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
123023660
NCBI-ProteinID:
XP_044286502
Ensembl:
ENSVKKG00000002096
UniProt:
A0A8D2IRY0
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAAVFPFRGPCPPMPAPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMAENPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgtctttcccttccgcgggccctgccctccgatgcccgctcccttggctccg
ttgcctgactatatgtctgaagagaagctgcaggagaaagcccgcaagtggcagcagctg
caggccaagcgctatgccgagaagaggaaattcggctttgtggatgcccagaaggaggac
atgcctcctgagcacgtgaggaaaataattcgggaccacggggacatgaccaacaggaag
ttccgtcatgacaagcgggtctatttgggggccctgaagtacatgccgcacgcggtcttg
aagctgctggagaacatgccgatgccgtgggaacagatccgcgacgtgcctgtcctgtac
cacatcactggggccatctcctttgtgaacgagatcccgtgggtgattgagccggtgtac
atcgcccagtgggggtccatgtggatcatgatgcggcgggagaagagggatcggcggcac
ttcaagcgcatgcgcttcccacccttcgatgacgaggagccgccccttgactacgccgac
aacatcctggatgtggagcccttggaggccatccagctggagctggaccccgaggaggat
gcccctgttctggactggttctacgaccaccagcctctgaaagacaaccgcaagtatgtt
aacggctccacctaccagcgctggcagttcaccctgccaatgatgtccacgctgtaccgc
ctggccaaccagctgctcacagacctcgtggacgacaactacttctacctgttcgacctg
aaggccttcttcacctccaaggctctcaacatggccatcccaggggggcccaagtttgag
ccgctggtccgagacatcaacttgcaggacgaggactggaacgagttcaacgacatcaat
aaaatcatcatccggcagcccatcaggaccgagtacaagattgccttcccctacctgtac
aacaacctgccccaccacgtccacctcacctggtatcacaccccgaatgtggtcttcatc
aagaccgaggatccggacctgccagccttctacttcgatccgctcatcaatcccatttcg
cacaggcactctgtcaagagccaggagccgctcccggatgacgacgaggagtttgagctg
ccggagttcgtggagcccttcctcaaggacacgccgctgtacacagacaacactgccaac
ggcatcgcgctgctctgggcgccgcggcccttcaacctgcgctcggggcgcacccgccgg
gctctcgacatccccctcgtcaagaactggtacagagagcactgccccgccgggcagccg
gtcaaggtgcgggtctcctaccagaagctgctcaagtactacgtcttaaacgctctcaag
cacaggccccccaaggcccagaagaagaggtacctcttccgctccttcaaggccaccaag
ttcttccagtccaccaagctggactgggtggaggtgggcctgcaggtgtgccggcagggc
tacaacatgctgaacctgctcatacaccgcaagaacctcaattacctgcacctggactac
aacttcaacctgaagcccgtcaagaccctcaccacaaaggaaaggaagaagtcgcgcttc
ggcaacgcgttccacttgtgccgggaggtgctgcgcctgaccaagctggtggtggacagc
cacgtccagtaccggctggggaacgtggatgccttccagctgtcggacggacttcagtac
atcttcgcccacgtggggcagctcaccgggatgtaccggtacaagtacaagctgatgagg
cagatccggatgtgcaaagacctgaagcacctcatctactaccgcttcaacacggggccg
gtgggcaagggccccggctgtggcttctgggcaccgggctggcgtgtgtggctgttcttc
atgcggggcatcacgccgctgctggagcgctggctgggcaacctcctggcccggcagttc
gaaggtcgccattccaagggtgtggccaagacggtcaccaagcagcgggtggagtctcac
ttcgacctggagctgcgggccgccgtgatgcacgacattctggacatgatgcccgagggc
atcaagcagaacaaggcgcggaccatcctgcagcacctgagcgaggcctggcgctgctgg
aaggccaacatcccctggaaggtgccggggctgccgacacccatcgagaacatgatcctg
cggtacgtgaaggcgaaggccgactggtggaccaacacggcccactacaaccgggagcgc
atccgccggggcgccacggtggacaagacggtctgcaagaagaacctgggccgcctgacc
cgcctgtacctgaaggccgagcaggagcggcagcacaactacctgaaggacggcccgtac
atcaccgctgaggaggccgtggcggtctacaccaccaccgtgcactggctggagagccgg
cgtttctcgcccatcccgttcccgccgctctcctacaagcacgacaccaagctgctgatc
ttggccctggagaggctgaaggaggcctacagcgtgaagtcccgcctgaaccagtcccag
cgggaggagctgggcctgatcgagcaggcctacgacaacccgcacgaggccttgtcccgc
atcaagcgacacctgctcacccagcgggccttcaaggaggtgggcattgagttcatggac
ctctacagccacctggtgcccgtgtacgacgtggagccgctggagaagatcacagacgcc
tacctggaccagtacctgtggtacgaggcagacaagcggcggctcttcccgccctggatt
aagccggccgacacggagccccctcccctgctggtgtacaagtggtgccagggcatcaac
aacctgcaggacgtgtgggagaccagcgagggggagtgcaatgtcatgctggagtcgcgc
ttcgagaagatgtacgagaagattgacctgacgctgctcaaccggctgctgcgcctcatc
gtcgaccacaacattgcggactacatgacggccaagaacaacgtggtcatcaactacaag
gacatgaaccacaccaactcctacgggatcatccgtgggctgcagttcgcctccttcatt
gtccagtactacggcctggtgatggacctgctggtcctgggcctgcaccgcgccagcgag
atggccggccccccgcagatgccgaacgacttcctcagcttccaggacattgccaccgag
gtggcccaccccatccggctcttctgccgctacatcgaccgcatccacatcttcttcagg
ttcacggccgatgaagcgagggacctgatccagcgctacctcaccgagcaccccgacccc
aacaacgagaacatcgtgggctacaacaacaagaagtgctggccacgcgacgcccggatg
cggctcatgaagcacgacgtaaacctcggccgcgccgtcttctgggacatcaagaaccgc
ctgccccgctcggtcaccaccgtgcagtgggagaacagcttcgtgtcggtgtacagcaag
gacaaccccaacctgctcttcaacatgtgcggcttcgagtgccgcatcctgcccaagtgc
cgcacgagctacgaggagttcacccacaaggacggcgtgtggaacctgcagaacgaggtg
accaaggagcgcacggcccagtgcttcctgcgggtggacgacgagtccatgcagcgcttc
cacaaccgggtccggcagatcctgatggcctcgggctccaccaccttcaccaagatcgtg
aacaagtggaacacggccctgatcgggctgatgacctacttccgcgaggctgtggtgaac
acgcaggagctgctggacctgctggtcaagtgcgagaacaagatccagacccgcatcaag
atcggcctgaactccaagatgcccagccgcttcccgccggtggtcttctacacccccaag
gagctcggggggctgggcatgctctccatgggccacgtcctcatcccccagtccgacctc
aggtggtccaagcagaccgacgtgggcatcacccacttccgctcggggatgagccacgag
gaggaccagctgatccccaacttgtaccgctacatccagccctgggagagcgagttcatc
gactcgcagcgcgtgtgggccgagtacgcgctgaagaggcaggaggcgatcgcgcagaac
aggcgcctgaccctggaggacctggaggactcctgggaccggggcatcccccgcatcaac
accctcttccagaaggaccggcacaccctggcctacgacaagggctggcgggtcaggacg
gacttcaagcagtatcaggtcctgaagcagaaccccttctggtggacgcaccagcggcac
gacgggaagctctggaacctgaacaactaccgcacggacatgatccaggcgctcggtggc
gtggagggcatcctggagcacacgctcttcaagggcacctacttccccacctgggagggg
ctcttttgggaaaaggccagcggctttgaggaatccatgaagtggaagaagctgaccaac
gcccagcgctccggcctcaaccagatccccaaccggcggttcaccctctggtggtccccc
accatcaacagggccaacgtgtacgtgggcttccaggtgcagctggacctgacaggcatc
ttcatgcacggcaagatccccaccctgaagatctcgctcatccagatcttccgggcccac
ctgtggcagaagatccacgagagcatcgtcatggacttgtgccaggtgttcgaccaggag
ctggacgctctggagattgagacggtgcagaaggagacgatccacccccggaagtcgtac
aagatgaactcctcctgcgcggacatccttctgtttgcctcgtacaagtggaacgtctcc
cggccctcgctgctggccgactccaaggacgtgatggacagcaccaccacccagaagtac
tggatcgacatccagctgcgctggggcgactacgactcgcacgacatcgagcgctacgcc
cgggccaagttcctggactacacgacggacaacatgagcatctacccctcgcccaccggc
gtcctcatcgccatcgacctggcctacaacctgcacagcgcctacgggaactggttccct
gggagcaagcccctgatccagcaggccatggccaagatcatgaaggcgaacccggccctg
tacgtgctgcgcgagcggatccgcaaggggctacagctctactcctcggagcccaccgag
ccctacctgtcctcgcagaactacggggagctgttctccaaccagatcatctggttcgtg
gacgacaccaacgtgtacagggtcaccatccacaagaccttcgaagggaacttgaccacc
aagcccatcaatggggccatcttcatcttcaacccccggactgggcagctcttcctgaag
atcatccacacctcggtgtgggcagggcagaagcgcctggggcagctggccaagtggaag
acggccgaggaggtggcagccttgatccggtcgctgcctgtggaggagcagccgaagcag
atcatcgtcacgcggaagggcatgctggaccccctggaggtgcacttgctggatttcccc
aacattgtgatcaaaggctccgagctgcagctgcccttccaggcctgcctgaaggtggag
aagtttggggacctcatcctgaaggccaccgagccccagatggtactcttcaacttgtac
gacgactggctgaagacgatctcctcctacacggccttctcccgcctcatcctcatcctc
cgggccctgcatgtgaacaacgaccgggccaaggtcatcctgaagccggacaagaccacc
atcacggagccgcaccacatctggcccaccctgacggacgaggagtggatcaaggtggag
gtgcagctgaaggacctcatcctggccgactacggcaagaagaacaacgtgaacgtggct
tccctgacgcagtccgagatccgcgacatcatcctgggcatggagatctcggccccctcg
cagcagcggcagcagatcgccgagatcgagaagcagaccaaggagcagtcgcagctgacg
gccacccagacgcggacggtgaacaagcacggtgacgagatcatcacctccaccaccagc
aactacgagacgcagaccttctcctcaaagacggagtggcgggtcagggccatctccgcc
gccaacctccacctgcggacgaaccacatctacgtctcgtccgacgacatcaaggagacc
ggctacacctacatcctccccaagaacgtgctgaagaagttcatctgcatctcggacctg
cgcgcccagattgccggttacctgtacggagtgagccccccggacaacccgcaggtgaag
gagatccggtgcatcgtgatggtgccgcagtggggcacccaccagaccgttcacctccct
gggcagctgccgcagcacgagtacctcaaggagatggagcccctggggtggatccacacc
cagccgaacgagtctccccagctctccccgcaggacgtcaccacccacgccaaagtcatg
gccgagaacccctcctgggacggggagaagaccatcatcatcacctgcagtttcaccccg
ggctcctgcaccttgacggcctacaagctgacccccagcggctacgagtggggccggcag
aacacggacaagggcaacaaccccaagggctacctgccctcccactacgagagggtgcag
atgctgctctcggaccgcttcctgggcttcttcatggtgccagcccagagctcctggaac
tacaacttcatgggcgtgcgccacgacccgaacatgaagtacgagctgcagctggccaac
cccaaggagttctaccacgaggtccaccgcccgtcccacttcctcaacttcgccctcctc
caggaaggagaggtctactcggccgaccgcgaggacctctatgcctag
DBGET
integrated database retrieval system
