Varanus komodoensis (Komodo dragon): 123024237
Help
Entry
123024237 CDS
T07701
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04382
Cornified envelope formation
vko04510
Focal adhesion
vko04512
ECM-receptor interaction
vko04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123024237
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123024237
09142 Cell motility
04820 Cytoskeleton in muscle cells
123024237
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
123024237
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vko04147
]
123024237
00536 Glycosaminoglycan binding proteins [BR:
vko00536
]
123024237
Exosome [BR:
vko04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123024237
Glycosaminoglycan binding proteins [BR:
vko00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123024237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
123024237
NCBI-ProteinID:
XP_044287593
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MRSSQHRYLQFLTGQVIQVTVLLGLMMLLSGSVQAGGKSYTGPCAGRDCSGGCECFPEKG
ARGQPGQLGQLGPPGPPGLEGIPGLSGQKGDKGERGQPGITGPKGEVGQRGVTGFAGVDG
VPGHPGQGGSRGKPGHDGCNGTKGDPGQQGGQGVQGLPGFSGIQGPKGQKGEPFVLAPEL
IISFRGNPGDSGLVGFPGPQGAPGLVGVFGPVGNPGLPGPAGPPGSQGLKGNRGLGFYGE
KGEKGDIGPPGPPGLPSTRELVISTDAISSEYKGMKGTKGMRGENGIPGFHAPFAEKGEE
GVPGFAGQRGLPGINGLKGAEGDAGISGHDGIPGIPGQKGIQGEPGDRGVQGPPVYAHRP
TLIKGARGDWGIPGVPGPEGDRGEQGSPGLPGLQGSSDDASSRRGLPGEMGPKGSAGDPG
HPAIHPGAPGLDGEPGSPGLPGLPGPPGTPDYIVGVKGLPGLPGALGIQGYPGQRGLKGM
KGEAGDCKCADSTEGKRGPAGPPGPPGFPGAVGQPGRKGETGDQGQHGVPGFLGAKGFPG
VPGPPGHKGIKGDSRYVTTKGAKGDQGIPGIPGAKGEDGLPGRDGKDGLPGFPGVRGDGI
RGGIGDVGEPGPPGLKGFPGETGHPGIGLPGPKGYRGIPGNPGKYGKPGLQGPPGPPGAS
AEIECGQRVADFITDNRTGLIQSGTDCIKLINGGSGNPGLPGPRGAKGAKGFPGEPGLHG
SKGLMGPQGNQGHESLAGPPGFPGPRGSRGAPGLLGEQGFPGSPGLPGFPGLPGAKGITG
DRLGAPAGPQGDGGPPGLPGSKGLQGDVGIPGFRGSYGIPGLPGAKGPQGSSGPVGLTGM
PGPQGSFGFPGLPGQQGPMGRPGSQGFVGPPGSRGDSGDPGKPGPMGVKGLPGEKGEPGL
FGDKGKVGFTGLPGIDGMPGLPGLKGDKGSPGIGGFKGAIGIKGWPGWLGVKGERGLPGR
QGLQGVPGDLGQKGDRGKRGPAGAPPKIMPYMLLEVKGEKGDEGEPGVKGHPGFKGDKGS
LGFPGQSGRPGLPGLQAYEKGQKGNLGIKGIRGIPGYAGVPGAHGIPGFPGTTGQRGDKG
ISGIPGIFGGRGQSGEVGSSGDVINLPGKPGSKGNAGMTGLTGWKGAIGEKGIPGDPGFS
GIEGMKGSQGSAGLRGQAGNISFFKTYLLL
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaggagttcacagcaccgctatttacaattcctgacaggccaggttatacaagttaca
gtactcctgggactgatgatgctcctaagtggcagtgtgcaagctggaggaaaatcatat
acaggaccatgtgcaggaagagactgcagtggaggttgtgaatgcttcccagaaaaagga
gctcgtggccagccagggcaactggggcagttgggaccccctggcccacctggattggaa
ggtatcccaggactgtcaggtcagaaaggagacaaaggtgaaagaggccaaccaggaata
actggaccaaagggagaagtgggacagagaggggttactgggtttgctggtgtagatggt
gtacctggtcatccaggccaaggaggatcaagggggaaaccaggccatgatggctgtaat
gggaccaagggagatcctggtcagcagggaggccagggggtccaaggcttgcctggtttc
tcaggaatccaaggacccaaaggtcagaaaggagagccttttgtgctggctccagaatta
atcatatcttttaggggaaatcctggtgattctggcttggtgggcttccctggacctcaa
ggtgcccctggtttggtgggtgtgtttggtccagttggaaacccaggtctacctgggcct
gcgggtccaccaggatctcagggacttaaaggcaacagaggtcttggcttttatggagaa
aagggtgagaagggtgatattggtcctcctggcccccctggacttccatcaactcgagaa
ctggtcatttcaactgatgcaatttcaagtgaatataagggcatgaaaggaacaaaagga
atgaggggagaaaatggaattccgggttttcatgcaccttttgcagaaaagggagaagaa
ggagtgcccggctttgcaggacaaagaggtttaccaggaatcaatggtctaaaaggagct
gaaggggatgcaggtatctcaggccatgatggcatccctggtatccctggtcaaaaagga
atacagggagagccaggagatagaggtgttcaaggaccaccagtttatgcacatcgcccc
acactaataaaaggtgcaagaggtgactggggaatccctggtgttcctgggcctgaggga
gacaggggtgagcaaggcagtcctggcctacctggtcttcaaggatcatctgatgatgcc
tcttcaagaagaggtttacctggagaaatggggcccaagggctctgctggtgacccagga
cacccagctattcatccaggtgcccctggtttagatggtgagcctggatcacctggcttg
cctggcttgcctggccccccaggaactccagattatattgttggggtgaaggggctcccc
gggctacctggtgctctgggcattcaaggttatccagggcagcgaggactaaagggaatg
aaaggtgaggcaggagattgtaaatgtgctgatagtactgaagggaaaaggggtcctgcc
gggccacctggtccaccaggttttccaggtgctgtgggacagcctggaagaaaaggcgaa
actggagatcaaggccaacatggagttcctggttttcttggtgcaaaaggatttcctggt
gttcctgggcctcctggacataaagggataaaaggcgattcccgatatgttacaacaaaa
ggtgccaaaggagatcaaggaattcctggaattcctggagctaaaggagaagatggttta
ccaggcagagatggcaaagatggtttaccaggatttcctggggttcggggtgatggtata
agaggtggaataggggatgttggtgaaccaggtccaccaggcctgaagggctttccaggt
gaaactggtcatcctggtattggtttgccaggccccaaaggatatcgtggcattccaggt
aatcctggaaaatacggaaagcctggtttacaaggtcctccaggccctccaggtgcttct
gctgaaatagaatgtggacaaagagtggcagacttcattacagataacagaactggacta
attcagtcagggactgactgcattaaattaataaacggaggttcaggtaacccaggtctg
ccaggaccaagaggtgcaaaaggtgcaaaaggttttccaggtgaaccaggtcttcatgga
tcaaagggactaatgggccctcaagggaatcaaggacatgagagtttagcaggcccacca
ggatttcctggacccagaggaagcagaggtgcaccaggattgcttggggaacagggtttt
ccaggcagtcctggtttgccaggttttccaggacttccaggggcaaaaggaattacaggt
gatagactaggagcaccagcaggccctcaaggggatggtggaccacctggacttccagga
tcaaaaggccttcaaggggatgtaggcataccaggatttagaggcagctacggcattcca
ggtctacctggagctaaaggaccacaaggatcttctgggcctgttggtttgactggtatg
ccaggaccacaaggatcatttggattccctggactgccaggccagcaaggacccatgggc
agaccaggttcacaagggtttgtgggcccacctggctccagaggtgattcaggagatcca
ggaaaacctggtcccatgggtgtgaaaggcctacctggtgaaaaaggtgaacccggtctt
tttggagataaaggcaaagttggtttcactggtcttcctggaatagatggaatgcctggt
ctcccaggcctgaaaggtgataaaggctctcctggtattggaggtttcaaaggtgctatt
ggcatcaaaggttggccaggatggctgggagtcaagggagagagaggcctccctggcaga
caaggtcttcaaggtgtgcctggtgatctgggacagaaaggtgaccgtggaaaacgtggc
ccagcaggagcaccccctaaaatcatgccatacatgctgctggaggtaaaaggggaaaag
ggagacgaaggcgaacctggtgtcaaagggcatcctggtttcaaaggtgataaagggtca
ctgggctttcctggccagtcaggaaggccaggtttacctgggttgcaagcatatgaaaaa
ggtcagaaaggaaaccttgggattaaaggtataagaggcattccaggatatgctggtgtc
ccaggagctcatggtatccctggcttccctggaaccacaggacagaggggagacaaaggc
atttcagggattcctggtatatttggtggaaggggccagtcaggagaagttggcagtagt
ggtgacgttataaatttgccaggaaaacctggttctaaagggaatgctggcatgactgga
ctcacagggtggaaaggagccataggtgaaaagggtatacccggtgatcctggtttttct
ggcattgaaggcatgaaaggatctcaaggctccgctggtttaagagggcaagcaggtaat
atttccttttttaaaacttatctcttattgtaa
DBGET
integrated database retrieval system