Varanus komodoensis (Komodo dragon): 123024910
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Entry
123024910 CDS
T07701
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vko03037
]
123024910 (IFT140)
Cilium and associated proteins [BR:
vko03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
123024910 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_WDR19_1st
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML
TPR_IFT80_172
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
TPR_GEMI5
WDR55
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_WDR35_TULP_N
TPR_COPA_B
tRNA_int_end_N2
Clathrin
WD40_MABP1-WDR62_1st
DUF2207_C
RNase_HII
Motif
Other DBs
NCBI-GeneID:
123024910
NCBI-ProteinID:
XP_044289060
LinkDB
All DBs
Position
Unknown
AA seq
1455 aa
AA seq
DB search
MAVYIDHQLEALQSRGPHSHIAWHHCQPFLAVASINSNSGGSVDIFPEQGEYVSEAHLER
NFRATCLNWHPSKLILAVGCEMGDVVVVNKQDKEHHAVPSNHNADITVLNWSTNGTRLVS
GDKLGVLVVWRMDQRGRVQGPPLLKHEYGKPLNYSIFRPPPPGEDLVQLAKAAVSGDEKA
LDMFNWRKSGMGMPLKMGPQEGLSFFISMTDGTVHYVNERGKTTQVLITESSVQKLLFME
KDVLIVITETLLLSLYKISPEGEAEELFKVKLTGKMGHPADIILIDRCLLITATGEPVLR
FWDLERGENYVLSLDEQFGFETGECINCVSYCNAKSLLSAGTDKGRIAMWRKVSVTDHSS
WSLEGKDRWKLQAPTELEGNIIQIKWGTKKNLLAVNTTNSVAILSEQAMSSHFHQQVAVV
QVSPNLFSVTSFSARTTENLRIDMYVNGVFATKDAVAFWNGRQVAVFEISGATLRNSGSF
ACDSPVLAMHEENIYTVEPNRVQVRTWQGTVKQLLVFSESEGNPFFLDICGNFLTVGTDL
AHFKIFDLSRREAKVHCGSKALVDLVPGSSGIASVKCNASGNKVSILMSKADGSIDSKIC
FYDIEMDIVTLFDFESGQQKDSREMLSSKQEVEGRSNSEYPELCDHIPASHFWDQNEPRL
FICETVPDSSQQSLDMKQQSTENAMNALIISFFCTEEHGLLLQDSFLLPSAYQSLLGMEV
PHYYFAKKPEAEKKEEAGPGVEPLCQMVARRPMRDFIGLEECDKTTRDAMLNFSFYLTIG
NMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNMGHARGAKALREAELEPEQE
AQVAMLAVQLGMLEDAERLYKQCKRYDLLNKFYQASDQWQKAIEVAEAHDRVHLRTTCYN
YAKHLEATGSRSLALSYYEKSDTHKFEVPRMLSEDLQALESYVNKMKDKDLWKWWAQYLE
GQADMEAAFRYYELAQDYFSMVRIHCFLGNIQKAAEIANATGNWAASYHVARQYESHDDI
KQAVHFYTRAQAFNNAIRLCKENNLDDQLMNLALLSSPEDMIEAARYYEGKGEQMDRAVM
LYHKAGHLSKALELAFATQQFAALQLIAEDLDEKSDPALLARCSDFFIEHAQYEKAVELL
LAAKKYQDALQLCLTQNLTITEEMAEKMTISKDSKELPEDSRRELLEQIADCCMRQGNYH
MATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSKQREIYIMAANYLQSLDWRKDPEIM
KNIISFYTKGRALDLLAGFYDACAQVEVDEYQNYEKALGALTEAYKCLSKAKTRSPVEQE
SKLALLHSKMAMVKRFIQARRLYAEDPKEAARQCELLLGEPELESAVRLGDVLGFLVEHH
LMAQEFQMAYRYLEEMRKKIPCVNLNYYVTQQTVEAVHRGLGIPLSRNPAPERVRHNSME
DKEVEEEVADEAEPS
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtacattgatcaccagctagaagctcttcagtcccgtggaccccattcccat
atagcttggcaccactgccagccatttttggcagttgcatccatcaattccaactcgggt
ggcagtgtggatatttttccagaacagggagagtatgtgtccgaggcacatttggagaga
aatttccgggccacttgcctcaactggcatccatccaaactgatactggcagtgggctgt
gagatgggggatgtggtggtagtaaacaagcaagacaaggagcatcatgcagtcccctct
aaccacaacgctgatattacagtcctcaactggagtactaatggcacccgtctagtttct
ggagacaaacttggcgttttggtggtatggaggatggaccagcggggtagagttcaaggc
ccccctttacttaaacatgagtatggaaaacctctcaattactctatcttccggccaccc
cctccgggcgaggacttggtacaactagccaaagccgcagtgagtggtgatgagaaggcc
ctggacatgtttaattggagaaaatctggaatgggaatgcctctgaaaatgggaccccaa
gaagggttgtccttctttatcagtatgacagacggtacagtgcattatgtgaacgagaga
gggaaaacaacccaggtattgatcacagagagttcagttcaaaagctgctcttcatggaa
aaggatgtcttaatagtcataacagagactcttctcttatctctttataaaatttctcct
gaaggagaagcagaggagctcttcaaggtgaagctgactgggaagatgggtcatcctgct
gatatcattttaattgatcgttgcctccttatcactgctaccggcgaaccagttcttagg
ttctgggacctggagcgtggtgagaactatgtgctctctctggatgaacaatttgggttt
gaaacaggagaatgcatcaactgtgtgtcttactgcaatgctaaaagtcttctgtcagct
gggacagacaaagggagaatagctatgtggaggaaagtatcagtcaccgaccatagctca
tggtcgcttgaaggcaaggacagatggaagcttcaggcacctaccgagcttgaagggaat
attattcaaataaagtggggaaccaagaagaatctcttggctgtaaacacaactaactct
gtggcgattcttagcgaacaggccatgtcctcacacttccaccaacaagtggcagtggta
caagtttcaccaaacctgtttagtgtcacttccttcagtgcaagaacaactgaaaacctc
cgtattgatatgtatgtgaatggtgtttttgccactaaggatgctgtagcattttggaac
ggaaggcaagttgctgtctttgagatctcaggtgccactttacgaaattcaggttctttt
gcctgtgattctcctgtgctggctatgcatgaagaaaacatttacacagttgagccaaat
cgtgttcaagttcgtacgtggcaaggcactgttaaacagctactggtgttctctgaatct
gaagggaatccatttttcctggatatctgtgggaatttcttgactgtgggaacagatttg
gctcactttaagatttttgatctttctcgcagagaggcaaaagtacattgcggcagcaag
gccctggtggatctggttccaggctctagtgggattgcatctgtaaagtgcaatgcgagt
ggcaacaaagttagcatcctcatgagcaaggctgatggaagtattgactccaagatctgc
ttctatgacattgaaatggacattgtcaccctgtttgattttgagtctggccagcagaag
gacagtcgagaaatgctttcctccaaacaggaggtagaagggagaagcaattctgaatat
ccagaactgtgtgaccacatccctgctagtcacttctgggatcaaaatgaaccaaggctt
ttcatttgtgaaacagttcctgactcaagtcagcaatcattagacatgaagcagcaatca
acagaaaatgcaatgaatgctctgattatatccttcttctgtactgaagagcatgggctt
ttgctccaagacagctttctcttgccgtcagcctaccagtcacttctgggcatggaagtg
ccgcattattactttgccaaaaagccagaagctgagaaaaaagaggaagcagggcctggt
gtggaaccactctgtcagatggtagctagaaggccaatgcgagatttcattggactggaa
gagtgtgacaagaccacacgtgatgctatgcttaactttagcttctacctcaccattggg
aatatggatgaggccttcaaatccatcaagctcatcaaaagtgaagctgtctgggagaac
atggctcgtatgtgtgtgaagactcaacggctggatgtcgccaaagtttgcttggggaac
atgggtcatgctcgaggagccaaggcactaagggaggcggaactagagccggagcaggag
gcgcaggttgccatgctggccgttcagctgggcatgctggaagatgctgagcggctgtac
aagcagtgcaaacgctatgatctcttgaacaagttctaccaggcctcagaccagtggcag
aaagccatcgaagtagctgaggctcatgatcgagtccacctacgcaccacctgctacaac
tacgccaagcacttggaagccacaggcagtcgcagtcttgcactctcctattatgagaag
tcggacactcacaagtttgaggtgcctcgaatgctttcagaagatttgcaagctttggaa
tcttatgtcaacaagatgaaagataaggacttatggaagtggtgggcgcagtacctggaa
ggtcaggctgacatggaagctgccttcagatattatgaactagcccaggattatttttct
atggtccgtattcactgtttcctaggtaacatccagaaggcggctgagatagccaatgca
accggtaactgggcagcttcatatcatgtcgcccgtcagtatgagagccatgacgacatc
aagcaagccgtgcacttctacaccagagcccaggcgtttaacaatgctattcggttgtgt
aaggagaacaacctggatgaccagctgatgaacctggctctcctcagttcaccagaagac
atgatcgaagctgcacgctattacgaagggaagggcgaacaaatggacagggcagtgatg
ctgtaccacaaggcaggacacctctccaaagcgctggagctggcctttgccacgcagcag
tttgcggccctgcagctcatcgctgaggatctggatgagaagtcggaccccgccttgctg
gctcgttgctcggacttctttattgagcacgcccagtatgagaaggccgttgagcttttg
ctagctgccaaaaagtaccaggatgccctgcagctctgcctgacgcagaacctgaccatc
actgaggagatggccgagaagatgaccatttcaaaggactcgaaggagcttccagaagac
tcccgccgggagctcctggagcagatagccgactgctgcatgcggcagggcaactaccac
atggccaccaagaaatacacccaggcaggaaacaagctgaaagctatgagagcactgctg
aaatccggagacaccgagaaaattgttttctttgccggagtgtccaagcagagggagatt
tatatcatggctgccaactacctccagtccctggactggcgaaaggacccagagatcatg
aagaacatcatcagcttctacaccaaggggagagctctggatctcttggctggcttttac
gatgcttgtgctcaggtggaggtagacgagtaccagaactacgagaaggcccttggagcc
ctgacagaagcatacaagtgcctgtcaaaggcgaagacgcggagtccagtggagcaagag
agcaagcttgcactcttgcacagcaagatggccatggtgaagaggtttattcaggcccga
agactttatgccgaggaccccaaggaagcagccaggcagtgcgagctgctgctgggagag
ccagagcttgagagtgccgtccgtctgggggacgtcctgggcttcctcgtggagcaccac
ctgatggcgcaggaattccagatggcataccggtacctagaagagatgcggaagaaaatt
ccatgtgtgaacctgaattactatgtgacccagcagactgtggaggcagttcacagagga
ctgggcattcccctgagccgaaacccggccccagagagagtccgccacaacagcatggag
gacaaggaagtggaagaggaggtggctgacgaggcagagccttcctaa
DBGET
integrated database retrieval system
