Varanus komodoensis (Komodo dragon): 123024935
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Entry
123024935 CDS
T07701
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04120
Ubiquitin mediated proteolysis
vko04137
Mitophagy - animal
vko04144
Endocytosis
vko04340
Hedgehog signaling pathway
vko04350
TGF-beta signaling pathway
vko04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123024935 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
123024935 (SMURF1)
04350 TGF-beta signaling pathway
123024935 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123024935 (SMURF1)
04137 Mitophagy - animal
123024935 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
123024935 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vko04131
]
123024935 (SMURF1)
04121 Ubiquitin system [BR:
vko04121
]
123024935 (SMURF1)
03029 Mitochondrial biogenesis [BR:
vko03029
]
123024935 (SMURF1)
Enzymes [BR:
vko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123024935 (SMURF1)
Membrane trafficking [BR:
vko04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
123024935 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
123024935 (SMURF1)
Ubiquitin system [BR:
vko04121
]
Ubiquitin ligases (E3)
HECT type E3
123024935 (SMURF1)
Mitochondrial biogenesis [BR:
vko03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
123024935 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
123024935
NCBI-ProteinID:
XP_044289125
Ensembl:
ENSVKKG00000006787
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MSNAGTRRAGSSIKIRLTDTHGSISCLCFHWAEMLYIFTLLCAKNLAKKDFFRLPDPFAK
VVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKSDSITISVWNHKKIHKKQGAGFLGCVR
LLSNAISRLKDTGYQRLDLCKLNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENE
GTVYADSGPGRPLSCYMEEPAPYTDSTGAAGGGNCRSVESPGQDQTLQVQRLRTPDVRGH
GQTPQNRPHGHQSPSPDLPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDE
LGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPNQPLPVPNEGSL
EDSEELPAQRYERDLVQKLKILRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKD
LKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINP
DHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWIL
ENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVSVTEENKKEYVRLYVNWRFMRGIEAQ
FLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLTDWKSNTRLKHCMADSNIVKWFW
QAVEAFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAH
TCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgcaggcacccggcgggccggctcgagtatcaagatccgcctcacagacaca
catggaagtatctcctgcctttgtttccattgggctgaaatgctatacatctttaccttg
ctttgtgccaagaatcttgcaaaaaaagatttcttcaggcttcccgacccatttgcaaaa
gtcgtggtggatggatctggtcagtgccactcaactgacactgtgaaaaacacattagat
cccaagtggaaccaacactatgacttatacgttgggaagtcagattctatcaccatcagt
gtctggaaccataagaaaatacacaagaaacagggagctggcttcctggggtgcgtccga
ctcctttccaatgccatcagcaggctaaaagataccggctaccagcgtttggatctatgc
aaactaaaccccacagataccgatgcagtacgaggccagatagtggtcagcttacagaca
cgggacaggataggcacaggagggtcagttgtagactgcagggggctgttggagaatgaa
ggaacggtttacgcggactcgggaccgggaaggccactgagctgttacatggaggagccg
gccccatacacggacagcactggtgccgcgggcggagggaactgtcgttctgtggaatcc
cctggccaggaccagacattgcaggtgcagcgattgcgaacgcctgacgtgagaggccac
ggacagaccccccaaaacaggccgcatgggcaccagtcgccatcgcctgatctgcctgaa
ggctatgaacaaaggacaacagtacaggggcaagtttactttttacatacacaaacgggt
gttagcacgtggcatgaccccaggataccaagagaccttaacagtgtgaattgtgatgaa
cttggacctctgccaccaggctgggaagttagaagtacagtgtcaggaagaatatatttt
gttgatcataacaacagaaccacgcagttcacagacccaagactccatcacatcatgaat
caccaatgccaactaaaagaacccaaccagcctttgccagtgcccaatgaggggtcttta
gaagacagcgaggagttacctgcccagagatacgaacgagacctggttcagaagctgaag
atactcaggcacgaactctctctccagcaaccccaagctggccactgccgcattgaagta
tccagagaagaaatatttgaggaatcctaccgtcagataatgaagatgaggccaaaagat
ttgaagaagaggctgatggtgaagtttcgaggagaagaaggcctggattatggtggagtg
gccagggagtggttgtacctactgtgtcatgaaatgttgaacccttattatggactcttc
cagtactccacagataacatttacatgctgcaaatcaatccagactcatctatcaaccct
gatcatctgtcttacttccactttgttggtcggatcatgggtctggctgtgttccatgga
cactacatcaatgggggtttcactgttcctttctacaaacagctgctgggcaaacccatc
cagttgtctgatctggaatccgttgacccagagttgcacaagagtttagtctggatttta
gaaaatgacatcactccagttctggaccacactttctgtgtggagcacaacgcgttcggc
aggattctacagcatgagctcaaaccaaatgggagaaatgtttctgtcacagaagagaac
aagaaagaatatgtcaggctgtatgtcaactggaggttcatgagaggcattgaggcccag
ttcctggctcttcaaaaaggttttaatgaacttattcctcaacatctactgaagcctttt
gaccagaaggagcttgagctcataataggtggcctggataagattgacctgactgactgg
aagtccaacacgcgcctcaagcactgcatggctgacagcaatatcgtcaagtggttctgg
caagcggtcgaggccttcgatgaggagagaagagcgaggctgctgcagtttgtgaccggc
tccactcgggtgccgctccagggcttcaaggctctgcaaggttctacaggcgcggcaggg
cccaggctcttcacgatccatttgatagatgcgaacacagacaaccttccaaaagcgcat
acctgctttaaccgaattgacattccgccttatgagtcctacgagaaactttacgaaaag
ctactgacagctgtggaagaaacttgtgggtttgcagtggagtga
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integrated database retrieval system
