Varanus komodoensis (Komodo dragon): 123025045
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Entry
123025045 CDS
T07701
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko00260
Glycine, serine and threonine metabolism
vko00630
Glyoxylate and dicarboxylate metabolism
vko00670
One carbon pool by folate
vko01100
Metabolic pathways
vko01200
Carbon metabolism
vko01230
Biosynthesis of amino acids
vko01240
Biosynthesis of cofactors
vko04981
Folate transport and metabolism
Module
vko_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
123025045 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
123025045 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
123025045 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
123025045 (SHMT1)
Enzymes [BR:
vko01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
123025045 (SHMT1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
123025045
NCBI-ProteinID:
XP_044289415
Ensembl:
ENSVKKG00000017911
UniProt:
A0A8D2LWA6
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MDRHIMANGDHGTKALWASHNRMVLEPLDTNDPEVHNIIKKEKQRQRQGLELIASENFAS
RAVLEALGSCLNNKYSEGYPGQRYYGGTEFVDQLERLCQKRALQAYGLDPQKWGVNVQPY
SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPQT
GYIDYDRLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADENGAYLMADMAHISGLVSA
GVVPSPFEHCDVVSTTTHKTLRGCRAGMVFFRKGVRSVDPKTGKETLYNLESLINQAVFP
GLQGGPHNHAIAGIAVALKQAMTPEFKAYQKQVVANCRALSNTLIGLGYHIVTGGSDNHL
ILVDLRNRGTDGGRAERVLELCSIACNKNTCPGDKSALRPSGLRLGTPALTSRGFLEEDF
QKVAHFIHKGIELTLQVQNDMSPKATLREFKEKLVSEEKYQAALKSLKEEVEAFADAFPL
PGLPVL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccacatcatggccaacggagaccacggcactaaggcgctctgggcctcccac
aacaggatggtgttggagcctctggataccaacgacccggaggtccacaacatcatcaag
aaggagaagcagaggcagaggcaggggctggagctgatcgcgtccgagaacttcgccagc
cgggccgtcctggaggccttgggctcctgcctgaacaacaaatactccgaaggatacccg
ggacaacggtactatggagggacagagtttgtggatcagctggagaggctgtgtcagaag
agggctctgcaggcttatgggctagaccctcagaagtggggcgtcaacgtccagccctac
tcagggtcccctgcaaactttgctgtctacaccgccctggtggagccccatggaaggatc
atgggcttggatttgcccgatggggggcacctgacccacggcttcatgacggacaagaag
aagatctcggccacctcgatcttctttgagtccatgccctacaaggtcaacccccaaacg
ggctacattgactacgaccgactagaagagaacgcccgcttgttccaccccaagctgatc
attgcaggggtcagctgctactcgcggaacctggactacgcccgcatgcggaagatcgcg
gacgagaacggggcgtacctgatggccgacatggcccacatcagcgggctggtgtcggct
ggagtggtgccgtcgcccttcgagcactgcgacgtggtctcgaccacgacccacaaaacc
ttgcggggctgccgggctggaatggtcttcttccgaaaaggcgtgcgcagcgtggatccc
aaaaccggcaaggaaaccctgtacaatctcgaaagcctcatcaaccaggcggtgtttcct
gggctccagggcgggccccacaaccacgccatcgctggaatcgctgttgctctgaagcaa
gccatgactccggaattcaaagcctaccagaagcaggtcgtcgccaactgcagggcgctc
tccaacaccctcatcggtctggggtaccacattgtcactggcggctccgacaaccacctg
atcctggtggacctgcgcaaccgcggcaccgacggcggacgggcagagcgggtcctcgag
ctctgctccatcgcgtgcaacaagaacacctgtccaggagacaagagcgctttgcgcccc
agtgggctgaggctggggaccccggctcttacctccaggggattcttggaagaggacttc
caaaaggtcgctcattttattcacaaaggtattgagctcaccttgcaggttcagaatgac
atgagccccaaagcgacgctgagggagttcaaagaaaaactcgtgtctgaggaaaagtac
caagctgcactgaagtctctcaaggaggaggtggaggccttcgcggatgccttccctctc
cctggcctgcctgtgctgtga
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