Varanus komodoensis (Komodo dragon): 123025241
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Entry
123025241 CDS
T07701
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vko01002
]
123025241 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vko04121
]
123025241 (USP42)
Enzymes [BR:
vko01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123025241 (USP42)
Peptidases and inhibitors [BR:
vko01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123025241 (USP42)
Ubiquitin system [BR:
vko04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123025241 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
123025241
NCBI-ProteinID:
XP_044289743
Ensembl:
ENSVKKG00000007930
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MTIVDKTSESSKPSASEKQPFSSVAPASGDMDAGSGGWGAVSSSLEAPKHKISLGPVPGA
AVYSNSSVPDKSKSSVQKDISSTGDGIAAPQKVLFPAEKICLKWQKMHRVGAGLQNLGNT
CFLNSALQCLTYTPPLANYMLSHEHSKTCHEQGFCMMCTMQGHITQALSNSGNVIKPMPV
INDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGGNKLDRHTQATTFIHQIFGGYLR
SRVKCMNCKGVSDTFDPYLDVTLEIKSAQSVNKALEQFVKPEQLDGENAYKCSKCKKMVP
ASKRFTIHRASNVLTLSLKRFANFSGGKITKEVKYPEYLDVRPYMSQPNGEPIIYALYAV
LVHTGFNCHAGHYYCYIKASNGQWYQMNDSTVSNSDIRTVLNQQAYVLFYIRSHDMKNGS
EHIHSVHTPGQSSPRPVINQRVVNNKQTAPGFIGPQLPPHMIKNSNHLNGTGSLKETPSS
SVAMASSITLSRPSSAPPATSIPNWTMNRPATSTTPDPSKKQKITISIHNKLPARQNASL
ASCTLDNLSKPAPSSTISNPSAVQSTSSASTVSAANQAPKPTTPSETCSKLVVNGKSKLS
PSMLVPYGAESSEDSDEESKGLVKENGHSKPFNGVLIENAASATESFSASCHSIEKEVLQ
HELPKNITVVVSISLNDAPKQNGQLCNDSTCQAKPVKLADNPFTKANGLPGKGTPTALPP
VPEDRILDSFKYNQLKTSSGERIRASGTEKASEEAGFSGDTPCTLANDIQNPLASSDAEI
SSTTEDPYERVTTETESPPLESEGQYGPKSTSLGAEELPRESDMEDHMEKTSGPKEGKVA
WEKNPEPARGAAEAAEKRAQSPLAKSDGECSSQKFAALNTPEKCQETQDSAKGCEDAALA
GPRLDAMGGNPCSKDDGGSSKQLQGNTERQALKSHSPPKEKVCASKKADKEHYRSKRKRS
ESEEEKEEVATRSQADGHYKRRCSSSREGGKQQEHCRREHYNANYYRFPCSPDPGRSLGK
HLPYRSHSRGRTDPERNRHCYGKGERSWSRERSWSRERYYQDLPRRWEGCRSYSYYYPSH
VPRYNQDRKFPHCERDYSKSSYVYSSPYKHVNYKSRWTHDQERKRRCPSPEDSESPPEKR
CQKILQSEPSDEQRGRKHKKSKKKKKLKDKHREREYRHRQDSDPSGSSSEAETHKHKHKK
KKKKKKKRAKKSEDCDEISAPPLPKPTSLETKNLKVWEMTESSLESSRKHGRSPHDGNTA
LCHKSKSIDSSNRDGPCPSTDHNIQSFCWKPSPHSLQYIYKPKSD
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaagacgtctgagtcctcaaagccttcggcttctgagaagcagcct
ttcagctccgtggcgccagcttccggagatatggacgcaggctcaggaggatggggtgct
gtgtcttcttctttagaagctccaaaacacaaaatctctttgggaccagtgccaggagct
gcagtgtactccaactcatctgtacctgataaatcgaagtcctctgttcagaaagatata
tcatctactggtgatggtattgcggcaccccagaaggttctcttcccggcagaaaagata
tgcttaaaatggcaaaaaatgcacagagttggagctggtctccaaaatcttggcaacaca
tgcttcctgaactcggctttgcagtgtctgacctacacccctcctcttgccaactacatg
ctttcccatgaacactccaaaacttgtcacgagcaaggattctgcatgatgtgcaccatg
caaggccacatcacccaggccctttcgaactccggcaacgtcatcaagccaatgcctgtc
ataaatgaccttagacggatagcaaaacatttccgttttgggaaccaggaagatgcacat
gaattcctacggtacactgttgatgctatgcagaaagcatgtctgaacggtggcaacaaa
ttggacagacatacccaagccactacattcattcatcaaatattcggaggatacctaaga
tctagagtaaaatgcatgaactgcaaaggagtttcagatacttttgatccgtatctggat
gtcacgctggagataaagtcagctcaaagtgttaataaagctctggagcagtttgtcaaa
cccgaacagttggatggtgaaaatgcttataaatgtagcaagtgtaaaaaaatggttcct
gcatcgaagcggttcacaatacatcgtgcttcaaatgtcctcaccttgtctctgaagcgg
tttgcaaatttcagtggtggaaaaattacaaaggaggtgaaatatcctgaatacttagat
gtccgaccttatatgtcccaaccaaatggcgagccaattatttacgccttgtatgctgtt
ctggttcatactggtttcaactgtcatgcaggacattactactgctacataaaggccagt
aatggccagtggtaccagatgaacgactccactgtctcaaacagtgacatcagaactgta
ctgaatcagcaagcttatgtgcttttttatatcaggtcccatgacatgaaaaatggcagc
gaacacatccattctgtacacactccagggcagtcttctccccggcctgttattaatcaa
cgggtagtcaataacaagcaaactgcaccaggatttattggaccacagctccctccccac
atgattaagaattcaaatcatttgaatggaactggatccctcaaagaaactcccagcagc
tctgtggcgatggcaagcagcatcacgctgagcaggccctcttccgctccgcctgccacg
tccatcccgaactggacaatgaacaggcctgccacctcgacgacgcctgacccttccaag
aagcaaaaaatcaccatcagtattcacaacaaactgcccgcccgccaaaacgcttctctt
gccagctgtactctggataacctcagtaagccagccccatcctcaaccatttccaaccct
tctgcagtgcaatctacctcaagtgcatctacagtatcggctgctaaccaggcccccaaa
ccaacgactccgagcgaaacgtgttctaagctggttgtgaacggcaagtccaaactcagc
ccaagcatgttggtcccttacggggcagagtcgtcggaagactccgatgaggagtccaaa
ggattggtgaaggagaatggacactccaagcctttcaacggcgttttaattgaaaatgcg
gccagtgccacagagagcttctctgcatcctgtcacagcatagaaaaggaggtcctgcag
cacgagctgcccaagaacataactgttgttgtttctattagcctgaacgatgcccctaaa
cagaatggacagctatgcaatgattccacttgccaagcaaagcctgttaaattggccgat
aacccatttaccaaagcgaatggattgcctggaaaaggtacacctacagctttgccccct
gttcctgaagacagaatcttagactcgttcaaatacaatcagctgaaaacctcatcaggg
gaaagaatacgtgctagcggaacagaaaaagcatcggaagaggctggcttctctggagac
accccttgtactctcgccaacgacatccagaacccattggcctcttcagatgctgaaatc
tcttctaccacagaagacccctacgaaagggttactaccgaaacagaaagcccgccgctt
gagagcgaggggcagtatggccctaaatccacttccctgggagcagaagaactccccagg
gaaagtgacatggaggaccacatggagaagacaagcggaccaaaagaggggaaggttgct
tgggagaaaaaccctgagcctgccagaggagcagccgaagcagcagagaaacgggcgcag
agccccctcgcaaaatctgacggtgaatgtagctctcaaaagtttgccgctctgaacaca
ccggagaaatgccaggagacacaggacagtgcgaaaggctgtgaggacgctgcgctcgcg
ggtccgaggctggatgccatgggtgggaacccatgttcgaaggatgacgggggcagcagc
aaacagttgcaaggaaacacagaaaggcaagcactgaaatctcattctcctccgaaggag
aaggtttgcgcctccaaaaaagcggacaaagagcactatcgttccaaaaggaagcgctcc
gaaagcgaagaggagaaggaggaggtggccacccggagccaagccgatgggcactacaag
aggaggtgctcctccagcagggaaggtgggaagcagcaagagcactgccggcgagagcat
tacaatgcaaactattacaggttcccgtgcagccctgatccagggaggagcttgggaaaa
cacctcccttaccgatctcacagccgagggaggacggacccagaaaggaacaggcactgc
tacgggaagggagagcggtcgtggagccgagagcggtcgtggagccgagagcggtattat
caagatcttccaaggaggtgggagggctgcagatcttacagttactattacccctcccat
gtccccaggtataatcaggatagaaaattccctcattgtgagagagactacagcaaatca
agttacgtttacagtagcccatataaacatgttaattataaaagcagatggactcatgac
caggaaaggaagcggagatgcccgagcccagaagacagcgagagtccccccgaaaagaga
tgccaaaagatcttgcaaagtgaaccatccgatgagcagagagggcgaaagcacaagaag
tccaagaagaagaagaaattaaaagataaacacagagaaagagagtacaggcatcgccag
gattctgacccatcggggtccagttctgaggctgagactcataagcataaacataagaaa
aagaagaagaaaaagaagaagcgtgcaaagaaatctgaagactgtgatgagatttcagct
cctccccttccaaagccaactagtttggaaaccaagaatctcaaagtctgggagatgacc
gaatcttctttggaatcatctaggaaacatggcaggagcccccatgacggaaacacggct
ctttgccacaaatcaaagagcatagacagtagcaacagagatggcccctgcccatctaca
gaccataatatccagagtttctgctggaagccatccccccacagtttgcagtatatttat
aaaccgaaaagcgattaa
DBGET
integrated database retrieval system
