Varanus komodoensis (Komodo dragon): 123026127 Help Entry 123026127         CDS       T07701                                  Symbol SYMPK Name (RefSeq) LOW QUALITY PROTEIN: symplekin   KO K06100   symplekin Organism vko  Varanus komodoensis (Komodo dragon) Pathway vko03015   mRNA surveillance pathway vko04530   Tight junction Brite KEGG Orthology (KO) [BR:vko00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     123026127 (SYMPK)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     123026127 (SYMPK)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vko03021]     123026127 (SYMPK)    03019 Messenger RNA biogenesis [BR:vko03019]     123026127 (SYMPK) Transcription machinery [BR:vko03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      123026127 (SYMPK) Messenger RNA biogenesis [BR:vko03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      123026127 (SYMPK)     U7-dependent histone pre-mRNA processing factors      123026127 (SYMPK) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N PDS5 Adaptin_N Cnd1 Cohesin_HEAT Motif Other DBs NCBI-GeneID:  123026127 NCBI-ProteinID:  XP_044291349 Ensembl:  ENSVKKG00000014947 LinkDB All DBs Position Unknown AA seq 1314 aa AA seqDB search MASGSGVGDPGLSRMSIASQFFAGEETTGTDTMTTSERVVDLLNQAALISNESKITILKQ VQELIINKDPTLLDNFLDEIIAFQADKSVEVRKFVIGFIEEACKRDTELLLKLIANLNML LRDENVNVVKKAILAMTQLYKVALQWMVKSRVINDMQEACWEMVSAMASEIIQLLDSDND GIRTHAIKFVEALIITLSPRMPDSEVPKRHKNDISLDRVPTDHAYIKYSALWEEGKAALA QLLKFMVHPAISSINLTAALGSLASIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSV RKNLKLHLLSVLKHPASVEFQAQITTLLMDLGTQQAEITRNMPNLKELRKRPRDESDPAL KKMKIEPPLGEDDEDKDLEQVAVPAPKPSMQVSPQSDTDITAEFLQPLLTPDNVANLVLI SMVYLPENMPASFQATYTPVESAGTEGQIKHLARLMATQMTAAGLGPGVEQIKQAKEAMK EEKMSKPESVLIKRRISALNPGQAISVVGAQSSTSPSATESGAPQAKRRPEPIIPSTQPR MAGASGRKKIFRLSDVIKPLTDAQKDKLKLAAVQRILRSEKAVACSGAAQARVKILSSLV TQFEVPLKREVLTFILDDIRNRLDLAFAWLYQEYNAYLSQYPSGSLGNYDECLIGLLSGL QEKPDQKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFEY LHVLLDLSSHEKDKVRQQALLFIKRMYEKDQLREYVEKFALNYLQLLVHPNPPSVLFGAD KDTEVAAPWTEETIKHCLYLYLALLPQNHKLIHELASVYTEAIADIKRTVLRVIEQPIRG MGMNSQELLKLVKNCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYNKRLPDVRFLIP VLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSAVSPLNPGELLIALHNID STKCDMKSIIKATNLCFAERNVYTSEVLAVVMQQLMEQNPLPMLLMRTVIQSLTMYPRLG GFVMNILSRLILKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLSAVFEKCPELRE PLLAHVRSFTPHQQAHVPNSTMAILEASNKQDVDGKELQPPEEARGTAPPRTKGLRRERE EDMEPQPLLPRVSQDMIALRLAQEKALKRQLEEEQKLKLKQQQPRPAAPAPSTPTPTTLP AEESGDSREEVPEAETPTIFISMQEEDESFGAESSLLDSSLEGPWPTKEPQSKEGAATSS SSDEGSASKPPAVSQAAPSPEQPAADSQPADTKPPSPSEEQPKPSTDEEQQADS NT seq 3945 nt NT seq  +upstreamnt  +downstreamnt atggccagcggaagcggcgtgggagaccccggcctctcgcgcatgagcatcgcatcccag ttcttcgctggggaggagaccactggcacagacaccatgactacctcggaacgggttgtg gatttgttaaatcaggctgccttaatcagcaacgaatctaaaatcacaattctgaagcag gtccaggaattgattatcaacaaagaccccacactgctggataatttcctggatgagatc attgcctttcaggcagacaagtctgtcgaagtgcggaagtttgtcattggattcatagag gaagcctgcaaacgggacaccgaactgctgctgaagctcattgccaacctcaacatgctg ctgagggacgagaacgtcaacgtggtgaagaaggccatcctcgccatgacccagctgtac aaggtggcgctgcagtggatggtgaagtcccgcgtgatcaacgacatgcaggaggcctgc tgggaaatggtgtcggccatggccagcgagatcatccagctgctggactcggacaacgac gggatccgcacccacgccatcaagttcgtggaggcgctcatcatcaccctttcgcctcgc atgcctgactccgaggtgcccaagcggcacaagaacgacatcagcctggaccgcgttccc acagaccacgcctacatcaaatacagtgccttgtgggaagaagggaaggcggcgctggca cagctgctgaagttcatggtgcacccggccatctccagtatcaatctgacggcagcgctg gggtcactggcctccatcgcccgccagcgccccatgttcatgtcggaggtgatccaggcc tacgagaccctgcacgccaacctccctccaacactggccaagtcccaggttagcagcgtg cggaagaacctcaaactccacctgctgagtgtcttgaagcaccccgcgtccgtggagttc caggcccagatcaccaccctgctgatggacctggggacccagcaggccgaaatcacacgc aacatgcccaacctgaaggagttgcgcaagcgcccacgggacgaaagcgaccctgccttg aagaaaatgaagattgaaccgcccctcggagaggatgacgaggataaagacctggagcag gtggccgtgccggctcccaagccttccatgcaagtcagcccacagtcagacaccgacata acagccgagtttctgcagcccctcctgactccagataacgtggccaacctggtcctcatc agcatggtatacctgccggaaaacatgccagcctctttccaagctacctacacgcccgtg gaatcggctggcactgagggccagatcaagcaccttgcccggctcatggccacccagatg acagcagctgggctgggaccaggcgtggagcaaatcaaacaggccaaggaggcaatgaaa gaagagaaaatgtccaagccggagagcgtgctgatcaagcggcgcatctccgcgctcaac ccggggcaggctatctcggtggtgggtgcgcagagctccacctcccccagtgccacggag tcgggagccccacaggccaagcggcgcccagaaccgatcatcccttccacccagcccagg atggctggtgccagtggccgcaagaagattttccgcctgagcgatgtgatcaagcctctc acggatgcccagaaggacaagctgaagctggcggctgtccagcggatcctgcgctcggag aaggcggtggcctgcagcggggctgctcaggcccgggtgaagatcctgtcgtccctggtg acccagttcgaggtccctctgaagagagaggtcctgaccttcatcctggatgacatccgc aaccggctggacctggcctttgcctggctctaccaggagtacaacgcctacctgagccag tacccctctggctcgctcggcaactacgatgagtgcctcattgggctgctctccggcctt caagagaagcctgaccagaaggatgggatcttcacaaaagtggtccttgaagccccgcta atcacggagagtgccctggaagtgatccggaagtactgtgaagatgagagccggacgtac ttgggcatgtcgacccttcgagacctgatcttcaagcgcccatcgaggcagtttgagtac ctgcacgtcctcctggacctcagctctcacgagaaggacaaggttcgccagcaagccctt ctgttcattaagcggatgtatgagaaagaccagctgcgagaatatgtggagaagtttgca ctgaattacttgcagctcctggtccaccccaaccctccctctgttctgtttggggctgat aaagatacagaggtggctgctccctggacagaggagaccataaagcactgcctctacctc tacctggccctcctcccccagaaccacaagctgatccatgagctggcctctgtgtacacc gaggcgattgccgacatcaagcgcactgtcctacgggttattgagcagccgatccgcggg atgggcatgaattcccaggaactgctcaagctggttaaaaactgcccgaaaggtgcggag accctggtgactcgttgcctgcacagcctaaccgataaagttcctccgtctccagagcta gtgaagcgagttcgggatctgtacaacaagaggctcccggacgttcgattcctcatccct gtgctcaatggcttggaaaagaaagaggtgattcaggctctcccaaagctcatcaagctg aaccccatagtggtgaaggaggttttcaaccgtctgctgggaacccagcacggtgaaggc aactctgccgtttctcccctgaatcctggggagctgctgattgccctccacaacatcgat tccaccaagtgcgacatgaagtccattatcaaagccaccaacctgtgctttgccgagcgc aacgtgtacacgtcggaagtgctggccgtggtcatgcagcagctcatggagcagaacccc ctgcccatgctcctcatgcggacggtgatccagtcgctgaccatgtacccgcgcctgggc ggctttgtcatgaacatcctttcccgcctcatcctgaagcaggtgtggaagtaccccaag gtctgggagggcttcatcaagtgctgccagcgcaccaagccccagtccttccaggttatc ctccagctgccaccgcagcagctcagcgctgtctttgagaagtgtccggagctgcgggag cctctgctggcccatgtccgctccttcaccccgcatcagcaagcccacgtcccgaattcc accatggcgatcctggaagccagcaacaagcaggacgttgacgggaaggagttgcagcca ccagaggaggcgaggggcactgccccccccaggaccaaaggcctgagaagagagagagag gaagacatggaacctcagcccctcctgcctcgtgtgtcccaggatatgattgccttgcgc ctggcacaggaaaaggctctcaagcgccagctggaggaggagcagaagctgaagctgaag caacagcagcctcgtccggcagctccagccccctccacccccacccccaccactcttcct gcagaggagtcaggggactcgcgggaggaggttcctgaggcagagacgcccacgatcttc atcagcatgcaggaggaagatgagagctttggtgcagaaagctccctgctggattccagt ctggaggggccctggcccacgaaggagccacagagcaaggaaggtgccgccaccagcagc agctcagatgagggatcagcaagcaagccaccagctgtcagccaagcagcgccctctcca gagcaacctgcagctgacagccagccagcggacaccaagccacccagcccgtcggaggag cagccaaaacccagcacggatgaagagcagcaggcagacagctga

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