Varanus komodoensis (Komodo dragon): 123026232
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Entry
123026232 CDS
T07701
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123026232 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123026232 (WDR33)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123026232 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Collagen
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
123026232
NCBI-ProteinID:
XP_044291515
Ensembl:
ENSVKKG00000013937
LinkDB
All DBs
Position
Unknown
AA seq
1319 aa
AA seq
DB search
MLHIRGVIRRSFKAEVIMATEIGSPPRFFHMPRFQHQAPRQLFYKRPDVAQQQAMQQLTF
DGKRMRKAVNRKTIDYNPSVIKYLENRVWQRDQRDMRAIQPDGGYYNDLVPPIGMLNNPM
NAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSP
VRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDD
GTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLAT
LHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVH
EGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWT
RNRPGDKMRDRYNLNLLPGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDE
TSEIEMTIPGLDWGMEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPTPAEPLN
DRKEDLKMEEKKKSQAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQGQQPPPPGGPVH
GPQHFPGQGPMSQVPQGFQQAHPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPPLH
QGGGGPQGFVGPQGPPQGLPRPQELHGHQGMQRHPGPHGPMGPPGPQGNSGPQGHLGPQG
PPGPQAHLGQQGPPTPQGHLGPQGPPGGQGPPGPRGMQGPHGVQGAQGMQGPVSQGPLMG
LNPRGMQGPPGPRENQGPGPQGMMMGHPPQEMRGPHGLLGHGPQEMRGPPPQGSMLGPPQ
ELRGPPGSQGQQGPPQGNMVAPQGNMQGPPGPQGQQNPSRGPHPSQGPPPFQQQKTPLLG
DGPRAPFNQEGQNTGPPPLIPGLGQHGGPGRHGTHNQGPGPNKGDSRGPPNHHMGPLSER
RHDQSSGGPDHGPERGPFRGGQEWGDSRDSRGMPDRRGPHPDFHEDFDRLDEFREDFHPD
KRFGHRLREFEGRGGPPQDEKWRRGGPGPPFPPDHREFNEGDGRGPNRGPPGPWDGRRPS
DERFPHDPEDARYRGRRDENFRRGTSSRHEGRGPRGRDSFPGPDDFVPEENFDSSEENAR
GREHGGRGRGRGTPRGGRKGLLPTPDEFPHFEGRMDGNREPGPRQDHSSHDGHSPASRER
SSSLQGMDMASLPPRKRPWHDGPGTSDHREMEIQGGPPEERGKGRGKSGPSQRMSKSGRS
SSLEGEHHDGYHREEPFGGPQGGSNPSRGGRSGSNWGRGSNMNSSQSRRGGSRGGGRGR
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgctccacataaggggagttatcagaagatctttcaaagcagaagtcatcatggccaca
gaaattggctcaccaccacggtttttccatatgccaaggtttcagcatcaggcccctcga
caactattctataagagacctgatgttgctcagcagcaagcaatgcagcagctcaccttt
gatggaaaacgtatgagaaaagcagtgaaccgaaaaactatagattataatccttctgta
atcaaatatttggagaacagagtatggcaaagagaccaacgggatatgcgggcaattcag
cctgatggagggtattataatgatttggtcccaccaataggaatgttgaacaatcctatg
aatgctgtaacaacaaaatttgttcggacatctaccaataaagtaaaatgtccagttttt
gttgttaggtggactcctgaagggaggcgcttggttactggggcttctagtggagaattc
acgttatggaatggacttactttcaactttgaaacaatattgcaggctcatgacagtcca
gtaagagctatgacttggtcacacaatgacatgtggatgttaacagcagaccatggggga
tatgtgaagtactggcagtccaacatgaacaacgtcaagatgttccaggcacataaggag
gcgattagagaggccagtttctcacccacggataataaatttgctacatgctctgatgac
ggcactgttagaatctgggactttctacgttgccatgaggagagaattcttcgaggccat
ggtgctgatgtcaagtgtgttgactggcacccaacaaagggtctagtggtttctggaagt
aaagatagccaacaaccaatcaaattctgggatccaaagactggccagagccttgctaca
ctacatgctcataaaaacactgtgatggaagtcaaattgaacctgaatggtaactggcta
cttacagcatctcgtgatcatctttgcaaactctttgatatccgaaatctgaaagaagag
cttcaggtcttcaggggtcataagaaagaagccacagcggtagcctggcatccagttcat
gaaggcctttttgccagtggaggatctgatggctcattgctgttctggcatgttggggtg
gaaaaggaagtcggaggtatggaaatggcccatgaaggtatgatctggagtttggcttgg
catcctctaggacacattctctgctcgggatcaaatgatcataccagcaaattctggact
cgcaatcgtcctggagataaaatgcgagatcgttataacctgaacctccttccaggaatg
tcagaagatggagtagaatatgatgacctggaacccaatagtcttgcagtaattccaggg
atgggaatacctgagcaactaaaactagccatggaacaagaacaaatggggaaagatgag
acgagtgaaattgagatgactatcccaggattggactggggaatggaggaagtgatgcaa
aaggatcaaaagaaagtaccacaaaaaaaagtcccctatgcaaaaccaatcccagcccag
ttccagcaggcttggatgcagaataaagttcctatcccaacaccagctgagccattaaat
gaccgaaaggaagatcttaaaatggaagagaaaaagaaatcgcaagcagagatagagcag
gagatggcagcacttcagtacaccaacccacagctcctagagcaactgaagattgaaagg
cttgcacagaagcaagcagagcaaggtcagcagccgcctcctccaggaggacctgtacat
ggaccccagcatttcccaggacaaggtccaatgtctcaggtgcctcaaggctttcaacag
gcccatccacctcagcagatgccaatgaatatgcctcagatgggaccacctggaccacag
ggacagttcaggccgccaggacctcaaggacaaatggggccccaaggtcctccattacac
caaggaggaggtggaccacaggggtttgttgggcctcaaggacctccacagggactgcca
agacctcaagaacttcatgggcatcaaggaatgcagaggcatcctggcccacatgggcca
atgggccctcctgggccacagggtaattctggacctcaaggtcacttgggcccacaaggc
ccacctggccctcaggcgcatttaggtcaacaaggtccaccaacgcctcaaggccactta
ggtcctcaggggccacctggtggtcaggggccacctggaccaagagggatgcaaggacct
catggtgtgcaaggtgctcaagggatgcagggtcctgtatctcaggggcccttgatggga
cttaatccaagaggcatgcaaggacctccaggaccacgggagaaccaggggcctggtcca
caggggatgatgatgggtcatccaccacaagaaatgagaggacctcatggtttactggga
catggccctcaggagatgaggggtcccccacctcagggttcaatgctgggtcctccacaa
gaattgcgtgggccaccaggttcacaaggacagcaaggacctccacaaggtaatatggtc
gcacctcaaggaaacatgcaagggccaccaggccctcaaggacagcagaacccttcaagg
gggccacatccttctcaaggccctccacctttccagcaacagaaaactcccttgcttggt
gatggtcctcgggccccgttcaatcaggaaggacagaatacaggtcccccaccattgata
ccaggattgggacaacatggaggaccaggacgtcatggcactcataaccaaggacctggt
cctaataaaggtgattcgcgtggtccaccaaaccatcacatgggccctctctcagaaaga
aggcatgaccagtccagtggtggcccagaccatggccctgaaagaggtccatttcgaggt
ggccaagaatggggtgatagtagagacagtaggggcatgccggatagacgaggacctcat
ccagatttccatgaagattttgaccgactagatgaatttcgtgaagatttccatccagac
aaacgatttggccaccgtttacgtgaatttgaaggaaggggaggtccaccccaagatgag
aaatggaggcgaggtggaccaggccctcctttcccccctgatcacagagaattcaatgaa
ggagatggcaggggtccaaaccgtggacctcctgggccttgggatggtcggagaccttca
gatgaacgatttcctcatgatcctgaggatgcacggtatcgaggaagaagagatgaaaac
tttaggagaggcacatcctcaaggcatgaaggccgaggacctagaggaagagacagtttt
cctggacctgatgactttgtgccagaagaaaattttgactcatcagaggaaaatgcaaga
gggagagaacatggtggccgaggtcgaggtcgaggtactccaagaggaggacggaaaggt
ttgctccccactccagatgagtttcctcactttgaaggacgaatggatggaaatcgagaa
ccaggtccacgccaggatcactcttctcatgatggtcactctccagcaagtcgagagcgt
tcttcctcacttcagggaatggacatggcctcactaccaccacgcaagcgtccttggcat
gatggaccaggaacctctgaccacagagaaatggaaatccaaggaggacctccagaggag
agaggaaaggggcgtggaaagtcaggtccttcacagaggatgtcaaagtctgggaggtcc
agttctttggaaggagagcaccatgatggatatcatagagaagaaccttttggaggacct
caaggaggcagtaatccttccagaggaggaagaagtgggagtaactggggaagaggaagt
aacatgaactctagccagtcaagacgaggaggttctagaggtggcggaaggggtcgatag
DBGET
integrated database retrieval system
