Varanus komodoensis (Komodo dragon): 123026905
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Entry
123026905 CDS
T07701
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123026905 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123026905 (CPSF2)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123026905 (CPSF2)
U7-dependent histone pre-mRNA processing factors
123026905 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
123026905
NCBI-ProteinID:
XP_044293029
Ensembl:
ENSVKKG00000000155
UniProt:
A0A8D2IUA1
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLADLARVPSPKVVLASQPDLDCGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDNEEDIDQPSVHKTKHDLMMKGEGNRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKNKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAESCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELRDDGEDT
EMQVDAPPSDSSAVAQQKAMKSLFGDDDKDVCEESEIIPTLEPLPPNEVIGHQSVFMNEP
RLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCEDFYKIRDLLYEQY
AIV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattatcaagctaaccaccctctcaggggtgcaagaagaatctgcactctgc
tacttactccaggtggatgagtttcgctttctgctggattgtggctgggatgagaatttt
tccatggacatcattgattccctgaggaagcatgtccaccaggttgatgcagtacttctt
tcacatcctgatcctttgcatttgggtgcactcccatacgcagtaggaaagatgggatta
aactgtgctatttatgcaacgattccagtatataaaatgggtcaaatgttcatgtatgat
ctttatcagtcacggcacaataccgaagacttcacattgtttaccctggatgatgtggat
gcagcttttgataaaatacaacaactaaaattttctcagatagtcaatctgaaagggaaa
gggcatggcttgtccatcaccccattgccagcaggccacatgataggaggtacaatatgg
aagatagttaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaaaagg
gagatccatttgaatggatgttccctggaaatgttaagtaggccttctttgctcattact
gattcctttaatgctacttatgtacagccaagacggaagcaaagagatgaacagctgcta
acaaatgtcttggaaactctgagaggagatggaaatgtcctaatagctgtggacactgca
ggcagagttttggaacttgcccagctgcttgatcaaatatggaggacaaaagatgctggt
ttaggagtctattctttagcacttttaaataatgtcagctacaatgttgtggagttctca
aaatctcaggtcgaatggatgagtgacaaattgatgagatgctttgaagataagaggaac
aatccttttcagtttcgtcatctttctctctgccatggacttgcagatttagctcgcgtt
cctagtcccaaagttgtccttgccagccagccagatctggactgtggcttttcaagagat
ctgtttatacagtggtgtcaggaccctaagaactccatcattttgacatacagaaccact
ccaggaacactagcacggtttctaatagataatccctctgaaaaagtgatagacatagag
ttgaggaaaagggtcaaactggaaggaaaggaacttgaagaatatctggaaaaagaaaag
cttaaaaaagaggcagctaaaaagttagaacagtccaaagaagcagatattgattccagt
gatgagagtgataatgaagaggacatagatcaaccatctgttcataaaactaaacatgac
ctcatgatgaaaggtgaaggaaaccggaaaggaagtttcttcaaacaggccaaaaagtct
tatcctatgtttcctgctccagaagaaaggattaaatgggatgaatatggagagattatc
aaaccagaagatttccttgttccagaacttcaggcaactgaagaggaaaagaacaaatta
gaatctggacttacaaatggagaggaacctatggaccaggatttatcagatgttcctacc
aaatgcatttcagcaacagaatccatggaaataaaagctcgagttacatatatagattat
gaagggcgctcagatggagactccattaaaaaaataattaatcagatgaaaccacggcaa
ttgatcattgtccatggaccacctgaagccagtcaagatcttgcagaatcctgtagagct
tttggtggaaaggacattaaagtttacatgcccaaactgcatgaaactgtagatgcaacc
agtgagactcacatataccaggtcagattaaaagactctctggtcagttctcttcagttt
tgtaaagctaaagatgctgaactggcatggatagatggagtcctggatatgcgggtatca
aaagtggacacgggggtgattttggaagaaggggaactaagagatgatggagaagacaca
gaaatgcaagtcgatgcacccccttctgattctagtgctgttgcacaacagaaggccatg
aagagtctctttggagatgatgacaaagatgtatgtgaagaaagtgagatcattcctact
ttagagcccttgccaccaaatgaggttattggacatcaatctgtcttcatgaatgagcca
aggctgtctgacttcaaacaggttcttttgcgagaaggaattcaagctgaatttgtggga
ggagtccttgtatgtaacaacttggtggctgttcgcaggactgaaactggacgtattgga
ttggaaggttgtctctgtgaagatttctataaaatcagagaccttttatatgaacaatat
gccattgtctaa
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