Varanus komodoensis (Komodo dragon): 123027305
Help
Entry
123027305 CDS
T07701
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123027305 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vko03021
]
123027305 (TAF5)
03036 Chromosome and associated proteins [BR:
vko03036
]
123027305 (TAF5)
Transcription machinery [BR:
vko03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123027305 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
123027305 (TAF5)
Chromosome and associated proteins [BR:
vko03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123027305 (TAF5)
STAGA complex
123027305 (TAF5)
TFTC complex
123027305 (TAF5)
SAGA complex
123027305 (TAF5)
SLIK complex
123027305 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD_LRWD1
Beta-prop_SPT8
Beta-prop_DCAF12
WD40_like
CDK5RAP3
eIF2A
Beta-prop_WDR35_TULP_N
Cytochrom_D1
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
123027305
NCBI-ProteinID:
XP_044293879
Ensembl:
ENSVKKG00000000071
UniProt:
A0A8D2INW0
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MAALPEEPVEAVTVKPDPDAGTAPPPPLPPPPPQSPATAAATPPVPTPSVAGLLTDGEPL
AGAVDLKPAAAPNAALPAASPLPTDRQTLLAVLQFLRRSNLRESEEILRREARLLADETA
VDPSLSAPGVQAAHGGEGQECSAGVAAPGAGDVLLNSVTFSQAGATISPAAVTASSAVSS
GTPGKVGVLVEDQPDVSAVLSAYNQQGDPALYEEYYSGLKHFIECALDCHRAELSQLFYP
LFVHMYLELVYNGHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMRGNETMLDFRT
SKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGE
AKREANKAKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPRKDSTGSKSKKQDPNAP
PQNRIPLPELKDSDKLDKIMNMKEATKRVRLGPDCLPSICFYTFLNAYQGLTAVDITDDS
SMIVGGFADSTVRVWSVTPKKLRSVKSAADLSLIDKESDDVLERIMDEKTASELKILYGH
SGPVYGTSFSPDRNYLLSSSEDGTIRLWSLLTFSCLVGYKGHNYPVWDTQFSPYGYYFVS
GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCV
RIFTGHKGPVHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALKFSRD
GEILATGSMDNTVKLWDAVKAFEDLETDDFTTATGHINLPESSQDLLLGTYMTKSTPVIH
LHFTRRNLLLAAGAYSPQ
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgccggaggagccggttgaagcagtaacagtgaagcctgaccctgatgcc
ggaacggccccgccaccaccgctgccgcctccccctccccagtcccctgccaccgcagca
gctacgccccctgtgcctactccctcggtcgccggtctcctcacggatggggaaccactg
gctggagctgttgacctgaagccggcggcggcccccaatgctgcactgccggccgcctca
ccgctacccaccgaccggcagacgttgttggctgtgctgcagttcttgcgccgcagcaac
ctccgcgaatctgaagagatccttcgtagagaagcccggctactcgccgacgagaccgcg
gttgatcccagtctttcggcgcctggagtccaggcagcccatggcggggaaggacaggag
tgcagcgccggggtcgcggcccctggagcaggggatgtgctgctcaattcggtcactttt
agccaggctggggcgaccatctctcctgccgcggtcacggcctcttccgcagtgtcctcg
gggacccctgggaaagttggagttctggtagaagatcagccagatgtgagtgcagtgtta
tctgcctacaatcagcagggagacccagccctttatgaagaatactacagtggcttgaaa
cacttcattgaatgtgctctggactgtcatcgagctgaattatcacaacttttttatcca
ctctttgtacacatgtacttggaactggtctacaatgggcatgaaaatgaagcaaaatca
ttctttgaaaagtttcatggggatcaggagtgttattaccaagatgatttgcgggtacta
tcaagtttaaccaaaaaagagcacatgagaggaaatgagacaatgctggatttccgaaca
agcaaatttgtgctacgtatttcccgtgactcttaccagctcttaaagagacatcttcag
gaaaaacagaacaatcagatctggaatatcgttcaagaacatctttacattgatatattt
gatggaatgcctcgtagtaaacaacagatagatgctatggtgggaagcttggcaggggag
gcaaagcgagaggctaataaagcaaaggtcttttttggcttattaaaagaaccagagatt
gaagtgcctttggatgatgaagatgaagaaggggagaatgaggaaggcaagccgaaaaag
aagaaaccaagaaaagacagtactggatccaagagtaaaaagcaagatccgaatgctcct
cctcagaatagaatcccccttcctgagctgaaggactctgataagctggataaaataatg
aatatgaaggaagccactaagcgtgtacgacttggtcctgactgcttgccttccatttgt
ttctacacttttcttaatgcataccagggtcttacagcagtggatattacagatgactct
agtatgatcgttggaggctttgcagactctactgtcagagtatggtctgtgacacctaaa
aagctacgtagtgtgaaatcagcagcagatctcagtctaatagataaagaatcagatgat
gttttggaaaggataatggatgagaaaacagctagtgagttgaagattttatacggccac
agtggacctgtctatggtaccagtttcagccctgataggaactatttgttgtcatcttct
gaagatggcactatcagattatggagcctcttaacattttcttgtctagtgggatataaa
ggacacaactaccctgtatgggacacacagttctctccttatggatattactttgtatct
ggtggacatgacagagtggctcgcttgtgggctacagatcactaccagcctttgaggatc
tttgctggccatcttgctgatgtcacatgtacgcgtttccatccaaattccaattatatt
gctacaggctcagccgataggacggtgcgactttgggatgtgttgaatgggaactgtgta
agaatcttcacaggacataagggaccagttcattcattagcattttctcctaatggaaga
ttcttggcaactggggcgacagatggaagagtgcttctctgggatattggacacggtctg
atggtgggagagttaaaaggacacacagacacaatctatgcactcaaattcagtagagat
ggagagatcttagcaacaggttcaatggataacactgtgaagctgtgggatgctgtgaaa
gcctttgaagacttagaaacagatgattttactacagccactggacatataaaccttcct
gaaagctctcaggacttgctactgggtacatatatgaccaaatcaacccctgtcatacac
ctccattttactcgcagaaatttacttcttgctgctggggcatacagtcctcagtga
DBGET
integrated database retrieval system
