Varanus komodoensis (Komodo dragon): 123028021
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Entry
123028021 CDS
T07701
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04270
Vascular smooth muscle contraction
vko04625
C-type lectin receptor signaling pathway
vko04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
123028021 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
123028021 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
123028021 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vko04131
]
123028021 (ARHGEF12)
Membrane trafficking [BR:
vko04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
123028021 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
DUF7744
Ribonuc_2-5A
PDZ_Tricorn
AAA_23
Motif
Other DBs
NCBI-GeneID:
123028021
NCBI-ProteinID:
XP_044295374
Ensembl:
ENSVKKG00000004237
LinkDB
All DBs
Position
Unknown
AA seq
1530 aa
AA seq
DB search
MSSTQSTITDRFPLKKPTRHGSILNRESPADKKQKVERCFSAHDFDPTDSSSRKTKCSSE
ESRSETYGLVQRCVIIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDSAAFGHMSPIMTSPHSP
GASGNTERITSPVLMGEENNIVHSQKVEILRKMLQKEQQQLQSLQEDYSRSPSPRLLKEI
QDAKKHIPQLQEQLSKATGSVQDGVLSSKAVMESLQISEVEAERGEVLNKGDCSFGDSLQ
TNSDMAESPRSGVKERIYLDESPEKSENQDTDSQSSIGSPSSRTAPPIIGAEDDDFDGEQ
EQINGQCSCFQNIELLKSRPAHLAVFLHHVVSQFDPASLLCYLFADLYKQTNSKETRRVF
TEFNQFFLDRTANLKVPIPDDISVDIEKRRLDLIPEELQRHYIQAMQDKVFPEVQRHLED
FRQKRSMGLTLAEGELARLDAERVRDRIVLEKERSCTEQIITKIEEVLMTSQPIEEEKSS
TIQYVVLTYMKHLGVRVKEPRSLDQKRGRIGFLPKIKQSIKKEKEGDEKKRRVFPSILGP
PRRPSRHDSYAIGKAMELQKQRHPKHLSTSSSVSPEPPDSVKMRQSGSSDGTDGAFPPAN
LMSPLAAGSLPSQEGSKDSEPGSKQVGETLPSSDSVEGTARTSNTVFDFPSPPLDHLQEE
EGELDRLAELGTPKSFRKIDSVGAGDNQSEDELFDFDMESDPPNWQQLVSREVLLGLKPS
EIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREAILPHSDLRKIFSNLEDILQLHSG
MNEQMKTVRKRNETSVIDQIGEDLLTWFSGAGEEKLKQATATFCSNQPFALEVIKSRQKK
DSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYSEHSEEREKVKKAA
DHCRQILNFVNQAVKEAENKQHLEDYQRRLDLSYLKQLEGPMLDEFRNLDLTKKKMIHEG
PLTWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILANAADSKHTFSPVIKLNT
VLVRQVATDNKAFFVISMSENGAQIYELVAQTVSEKTVWQDLIARMAGTVKVGRGRRVIP
LPQSGPCEEDHEEEEQQKLKEEQATPESSMQSPDKELGLESPLIRKAQSPSAAMSERSEE
EELLEADRSFGEKPPTDLLVKESPERYCHTSPDLSLQISEERWALDALRNLGLLKKLLMQ
QLGMSEQKPCEDWQHFSRHRTVSQGAQEGRGLWRADNDKASLSGASRTLPAKGAGSFGPY
CGHRTPGEFVPLEDATSSSSHLMDSLRENPDTPTPELEGAGPDEGGEHFFDAREVHSDEN
HSEGEVAERKEVEEVQLRISGNYLILDGYGSVQESSTDEEVTSLVLQCTAGGSRMNSAHE
QPASLQDAQTDRASLPFAEELMVSHWEAKESCSDVLRPPFSAESSALVMHYIQKIEANLE
HLKEVEENYTTLLQQRLAGSVPADEQSDKS
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcacacagtccacaatcacggacaggtttccccttaaaaaacctacaaggcat
ggcagcattctgaacagagagtctccagcagacaagaagcagaaagttgagcgctgcttt
agtgcccacgactttgaccctacagatagctcctccaggaagacaaagtgtagctcagag
gagagtagatccgaaacatatggtcttgttcagcggtgtgttattatccagagggatgaa
aatggatttgggttgacagtcagtggcgacaacccggtgtttgtgcagtctgtcaaggaa
gatggagcagccatgcgggctggggttcaaactggtgaccgaatcatcaaggtgaatggg
actctggttacacattcaaaccatttggaggttgtgaagctgataaagtcgggttcctat
gtagcgctcactgtgcaagggcgcccaccagggtcgccccagatcccactggctgattcg
gaggtggattcagcagcatttgggcatatgtcccccatcatgacatctccgcattcacct
ggagcatctggaaacacagagagaattaccagccctgtgctgatgggggaggaaaataat
attgtgcacagccagaaagtggagattttgaggaagatgctgcagaaagagcaacagcag
ctacagtctttgcaagaagactacagccgttctccttctccccgactgctcaaagagatc
caggatgccaagaagcacatccctcagctccaggagcagttgtccaaggcaacaggctcc
gttcaggatggagttttgtcttccaaagcagtgatggaatctttgcagatcagtgaggtc
gaagctgagaggggggaagtgttaaacaaaggagactgcagctttggcgacagcttgcag
acaaacagtgacatggctgagagtcctcgtagtggcgtgaaggagcggatctatctggat
gagagcccagagaagagtgagaatcaagacacagactctcagtccagtattggaagccct
tcctctcggacggcacctccgatcataggagcagaagatgatgactttgatggtgaacag
gagcagatcaacgggcagtgcagttgtttccagaacatagagcttctgaaatctcgtccg
gctcacctggctgtctttctgcatcacgttgtgtctcagtttgacccagcttcattgctt
tgctatctttttgcggacctatacaaacaaacaaattccaaagagactcgtcgtgtcttc
actgagttcaatcagttcttcttggatcgcactgcaaatttgaaagttccaattccagat
gatatttctgtagatatagaaaagagaaggctggacttaattcctgaagagctgcaacgc
cattatattcaagctatgcaagataaagtatttccagaagtgcagcggcaccttgaggat
tttagacagaaacgcagcatggggctgaccctggcggaaggagagttggccaggctggat
gcagagcgtgtccgtgaccgtatcgtgctggagaaggagagatcatgcacagagcagatc
attaccaaaattgaagaagtgctgatgacatctcagcccattgaagaggaaaagagttca
accatacaatatgttgttctcacctacatgaaacaccttggtgtgagagtcaaagagccc
cggagtctagatcagaagcgtggacggattggattcctgccaaagataaagcaaagtata
aagaaagagaaggaaggagatgaaaagaagaggagagttttccccagtatcctgggaccc
ccaaggaggccaagccgccatgacagctatgcaataggcaaagccatggaattacaaaag
cagcgccatccgaagcacttatccacttcttcctctgtcagtccggagccaccagattct
gtcaagatgcgccagagtggttccagtgatggcacggatggcgccttcccacctgctaac
ctcatgtccccactagctgctggaagcttgccttcccaagaagggagcaaggacagtgaa
ccagggtcgaagcaagttggagaaactctgccttctagtgactctgtggaggggacagcc
cgcacatcgaacaccgtttttgatttcccctcccctccgctggaccacctgcaggaagag
gaaggcgagttggacaggttagcggaattaggaacaccgaaatctttccgcaagatcgac
agcgtgggtgccggggataaccagagtgaagatgagctctttgattttgacatggagtcg
gacccacccaactggcagcagcttgtgagccgcgaggtgctgcttggcctgaagccctct
gagattaaacgccaggaagtgataaatgagctgttttataccgagcgtgctcatgtccgc
acgctgaaggttctggatcaggtcttctatcagcgcgtgtcccgtgaagcaatactgcct
cactccgacttgcggaaaatattttcaaacctggaggatatccttcagcttcactctgga
atgaatgagcagatgaaaacagtgaggaagaggaacgagacttctgttatcgatcagatt
ggagaggacttgttaacctggttcagcggagcaggggaggagaaactgaaacaagccact
gccactttctgcagcaaccagccctttgctctggaggtgatcaagtcccggcaaaagaaa
gactctcgcttccagacatttgtccaggatgctgagagcaatccgctctgtcgtcgactg
cagctgaaagatataattcccactgagatgcagaggctgaccaaatatccccttcttctg
gataatattgcaaagtactccgaacactctgaagagagggagaaagtgaagaaagcagca
gatcattgtcggcagatcctcaactttgtgaatcaagcagtcaaagaagcagagaacaaa
cagcatttggaagactaccagcgtcggcttgatttgtcctatttgaagcagttggagggt
cccatgctagatgagttcaggaatttggatttaaccaagaagaaaatgattcatgaaggg
cctctgacctggaaggtgaatcgtgacaagacaattgatctctacacgctgcttttggag
gatattctggtactgttgcagaagcaggatgataggttggtgctgagatgccacagcaag
atcttggccaatgcggcagatagcaagcatacattcagccctgtcatcaaactgaacact
gtgttggttcgtcaagtggccacagataacaaagcgttcttcgtcatttccatgtcagaa
aacggagcccagatttatgaactggtggcgcagacagtttctgaaaagactgtgtggcaa
gacctcatcgcccgcatggcaggaacggtgaaagtcggaagaggcaggcgcgtaattcca
ctaccacagtcaggaccatgcgaggaagaccatgaggaggaagagcagcagaaactgaag
gaagaacaagctactcctgaaagcagcatgcagagcccagacaaagaactgggactggag
tctcctctgatacggaaggctcagtccccttccgctgccatgtctgaaaggtcggaagag
gaggagctcctggaagctgacagatcgtttggagaaaaaccaccaaccgatttgctggtc
aaagaatcccccgagcgctattgccatacaagcccagacctctcgttacaaatctcagaa
gagcgatgggcattggatgcactaaggaacctgggcttgctgaagaagttgctgatgcag
caactgggcatgtctgaacagaaaccctgcgaagactggcagcatttttccagacacagg
acagtttcccagggggcccaagagggcagagggctgtggcgcgcagacaatgacaaggcg
tccctctctggggccagtaggacactgcctgccaagggcgccggtagttttggcccttat
tgtggtcaccggactccaggcgaatttgtgccactggaggatgctacgtcgagcagcagt
cacttaatggactccttgcgtgaaaacccagacacccccacccctgagttggagggggcg
ggcccggatgaagggggagagcacttcttcgatgctcgcgaggtccacagtgatgagaac
cattcggaaggcgaagtggcagagaggaaagaggtcgaagaggtgcagttgcggatctca
ggaaattatttgatccttgacggatatggctcagtacaggaaagctctaccgatgaggag
gtaacttcgttggttctacaatgcactgcaggcggcagcagaatgaactctgcccacgaa
cagccagcctctctgcaggatgcccagacagacagagcaagcctgccatttgcagaggaa
ttaatggtctcccactgggaagcaaaggaatcctgctcggatgtactgaggcctcccttc
tctgcggagtcgagtgccctggtgatgcattacatccaaaagatagaggccaaccttgaa
cacctgaaggaggtggaggagaactacacgactcttcttcagcaaaggctggctggatca
gtccccgcagatgagcaatcagataaaagttag
DBGET
integrated database retrieval system
