Varanus komodoensis (Komodo dragon): 123028048
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Entry
123028048 CDS
T07701
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03013
Nucleocytoplasmic transport
vko03015
mRNA surveillance pathway
vko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123028048 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
123028048 (NCBP1)
03015 mRNA surveillance pathway
123028048 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123028048 (NCBP1)
03041 Spliceosome [BR:
vko03041
]
123028048 (NCBP1)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
123028048 (NCBP1)
Spliceosome [BR:
vko03041
]
Common components
Common spliceosomal components
Cap binding complex
123028048 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Importin_rep_6
Vfa1
NDUF_B5
DUF1690
Motif
Other DBs
NCBI-GeneID:
123028048
NCBI-ProteinID:
XP_044295428
Ensembl:
ENSVKKG00000003283
UniProt:
A0A8D2J6J4
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRRTSHSLKIEDRLESLICRVGEKNTSSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFIEAMIRQLKECLKVNM
YNEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVAVTQEEDVPQVRCDWYVYAFLSSLPWV
GKELYEKKDAEMDRILASVENYLKRRQKIHVPMLQVWSADKPHPQEEYLDCLWAQIQKLK
KDCWQERHIPRPYLAFDNVLCEALQHNLPPFTPPPHTEDSSYPVPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFSELF
QLPFPPHTEVMYTTLFIELCKLQPGSLPQVLAQATEMLFMRLDTMNTICIDRFINWFSHH
LSNFQFRWSWEDWSDCLSEDLDKPRPKFVREVLEKSMRLSYHQQIIDIIPAVFSALTPAN
PACIYKYGDESNKSLPGYNVALCLNIAIKNKAGNDEILTILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLASKSFSHSFSALGKFREVFKTLAESDEGKLHVLRVMYDVWKNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVAMIQKELE
EAKARLAKQHKRRNSDDDDDDDDRSSDQEDGPLKEQIERLQEKVESAQSEQKNLFLVIFQ
RFIMILTEHLVRCETGGIDVITPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELD
HHILAVFQQFCALQA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaggcggcacagcgacgagaacgacggagggcagcctcacaagagaaggaga
acatcacattcattaaagattgaagatcgtcttgaatccttaatatgtagagtgggagaa
aagaatacttcttctttggagagtaacttggaaggcctggctggagttctggaagcagat
ctgccaaactacaaaagcaagatactaagactcctttgtacagttgcacgcttgttacca
gaaaagctgactgtttacacaactctggttggattgctgaatgccagaaactacaatttt
ggtggagagtttatagaagccatgatacgtcaactcaaagaatgcttgaaagtcaacatg
tacaatgaagctgtgcatttagtccgtttcctgtctgatcttgtgaattgtcatgtaata
gctgcaccttcaatggtagctatgtttgagaattttgttgctgtgactcaggaggaagat
gtacctcaggtgcgatgtgattggtatgtgtatgcatttctgtcatccttaccttgggtg
gggaaggagttatacgagaagaaggatgctgaaatggaccgcatcttggccagtgttgaa
aactatttgaaacggcgtcagaagattcacgtgcccatgttgcaggtttggtccgctgat
aaaccacatccacaagaagagtatttagattgcctttgggctcagattcagaagctgaaa
aaagattgctggcaagaaaggcacatcccaaggccatacctggcatttgacaatgtgctc
tgtgaagcacttcagcacaatctgcctccttttaccccaccacctcacactgaagattca
agttacccagtgccaagagttatcttcagaatgtttgactacaccgatgatcctgagggt
cctgttatgcctggcagtcattccgttgagagatttgtgatagaagaaaatcttcattgc
atcatcaaatctcactggaaggaaaggaaaacatgtgctgcccagttactgagctaccca
ggaaataacaagatccctctgaactaccacatagttgaggttatcttttctgagctcttc
cagcttccttttccaccccacactgaagtcatgtacacaacactttttattgagctttgt
aaacttcagcctggctctttaccccaagttcttgcacaagccacagaaatgctgttcatg
cgcttggatacgatgaatacgatttgtatagacaggttcattaattggttttcccaccat
ctaagtaactttcaattccgttggagctgggaagattggtcagattgtctttctgaggac
cttgacaagcccagaccgaaatttgttagagaagtactggaaaaaagcatgaggctctcc
taccatcagcaaataattgatattattcctgctgttttttcagccttaactcctgcaaat
ccagcatgtatttataaatatggagatgaaagtaacaagtctcttccaggatacaatgtt
gcactctgtttaaacattgctattaaaaacaaagcagggaatgatgaaatcctcactatt
ctgaaggatgtgcccaatcctaaccaggatgatgatgatgatgaaggcttctccttcaat
cctttaaaaatagaggtatttgtccagacactgctgcatttagcttcaaagtcattcagt
cactccttcagtgctttgggaaaatttcgtgaagtcttcaaaaccctggcagagagtgat
gaagggaagctccatgtcctccgagttatgtacgacgtatggaagaatcatccacagatg
attgctgtgctggtggataagatgatccgcacacagattgtggattgtgctgcagtagcc
aactggattttctcctcagagctggctcatgattttacaaggttttatatctgggaaatt
ttacattcaacaattcgtaaaatgaacaagcatgtggcaatgatccaaaaggagctagaa
gaggccaaagcaagattagccaagcaacacaaacggcgaaacagtgatgacgatgacgac
gatgatgatcgaagcagtgatcaggaagatggccctctgaaagaacagatagagcgcctg
caagaaaaagttgaatcagctcagagcgaacagaaaaacctttttcttgtaatattccag
cgtttcattatgatcctaacagagcacctggtccgatgtgaaacaggagggattgatgta
attacaccttggtacaaaaactgtatagagagactgcaacagatcttcttacagcaccat
cagatcatccagcagtacatggtgaccttggagaaccttctgttcacagcagaattggac
catcacatattggctgtatttcagcagttctgtgcactgcaggcctga
DBGET
integrated database retrieval system
