Varanus komodoensis (Komodo dragon): 123028059
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Entry
123028059 CDS
T07701
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vko03016
]
123028059 (TRUB1)
Enzymes [BR:
vko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
123028059 (TRUB1)
Transfer RNA biogenesis [BR:
vko03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123028059 (TRUB1)
Prokaryotic type
123028059 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
123028059
NCBI-ProteinID:
XP_044295483
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MNSAAAAKLRSCNGLFAVYKPKGPTSSDVLNRLKGKLFAEAGIVEPTRRKRKQALKFGHG
GILDSNATGVLVVGIGKGTRMLSSMLAGSKKYTVIAELGKATDTFDSTGQITEEKPYDWI
TKEDLEAVLQKFTGNIMQVPPVYSALKKDGQRLSDLVRKGEGVEAKPARLVTVYSLTLKN
FEPPLFTLDVECGSGFYVRSLVNDIGKELSSCATVQELTRTKQGPFTLEEHALYEDKWTI
DEIAQSLECCMPLLQAEPSRKKLKTELSEEHTMSSEDK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgcagcagctgcgaagcttcgctcttgtaatgggctgtttgcagtgtataaa
cctaaagggcccacttcttcagatgtattaaaccgtcttaaggggaagctgttcgcagaa
gctggtatagtggagcctaccagaagaaaaaggaaacaagctttaaagtttggacatggt
gggattctggatagcaatgccactggcgtactagtggttggcattggaaaaggaactaga
atgttgagcagcatgttggcaggttctaagaaatacactgttattgcagaattgggaaag
gcaacagacacatttgattctactggacaaataactgaagaaaaaccttatgactggata
accaaagaggatcttgaggctgtcctgcagaaattcactggaaacatcatgcaagttccc
ccagtctattctgccctgaagaaagatggacagaggttgtcggatctggttaggaaagga
gaaggtgtggaagcaaagcctgccaggctagtcaccgtttacagtctcactctcaaaaac
ttcgagccgcccttgttcacgctcgatgttgaatgtggcagtggcttttatgtcagaagc
ttggtcaacgacattggcaaagagctttcctcctgtgccaccgtacaggagctgacccga
accaaacagggaccatttacactggaagaacatgcactttatgaagacaaatggacaatt
gatgaaattgctcaatccctggagtgttgcatgcctcttctccaggcagagccatctcgt
aaaaaattaaagacagaactgtctgaagaacacaccatgagcagtgaagataagtga
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