Varanus komodoensis (Komodo dragon): 123028269 Help Entry 123028269         CDS       T07701                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism vko  Varanus komodoensis (Komodo dragon) Brite KEGG Orthology (KO) [BR:vko00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vko03021]     123028269 (SETX) Enzymes [BR:vko01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      123028269 (SETX)     5.6.2.5  RNA 5'-3' helicase      123028269 (SETX) Transcription machinery [BR:vko03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      123028269 (SETX) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_12 AAA_11 AAA_19 SEN1_N AAA_30 Viral_helicase1 UvrD-helicase AAA_22 UvrD_C_2 DEAD AAA_16 SLFN-g3_helicase Helicase_RecD NPHP3_N ResIII AAA_25 FemAB RNase_Y_N Motif Other DBs NCBI-GeneID:  123028269 NCBI-ProteinID:  XP_044295857 Ensembl:  ENSVKKG00000002543 LinkDB All DBs Position Unknown AA seq 2426 aa AA seqDB search MEQINFSYQVIGKHPGIYLLMVHPNEVIRRWALLTARNLGKVDRDDYYDIQEVLTCLFKV IELGLFENPDIYNSSVFEKGKLILLPSHLYDTTNHKNYWLGICMLLTVLEEQAMETLLLG PDKQNDFMQSIMNTMKKEADDGRDDPFWPALHCFMVVLDKLGSKVWGQLIDPIQAFQTII NNTSYIKEIEHIRQSCRRTKSEPPSDYGDEMITCSQIVYNYHPEKPHKDIGWRTAVCPDY CPNLYEDMQTLSDMFQSEIGRDMQLHNSTFLWFIPFVHSLMDLTNIGVAYGVEIIRHLCS EVRVVPSDALQGGDKVSEFFIWILVTVVELSIKRNCFQSLWICSEKWVETVVKCATLPST VFACAAERGGTRSCPRSASAISSWEHGSVQSACMNLIRNILKEGYQVGQKATPFLDELNL LRRSHKDWNLSPERALELQTCLKQIIWQRKLNPVPHVESPTACVSPPSLSVKLEWQEDRC LADADYRHGPYLSPRGRDDVCLEGSSPRKNPGLGKEQCARSPKDQPLHRTSECLLSNVKQ EPKESLVQESNNLRFMFAKGHRDAQKNGRVFQGLGDQSESDATSKSCFEQAFQNMEKKEV IPKEEKASCLAENNHSDRNGHSASKTKVGLNNLVNKNESKKPDLTLKLKQLFGNQKSKKP ASGPDTDKPLPANSGSSGWERPRGEVAAPSCGTSNVSLCKLETSSSDAFQGKPLCIKRES KDTLADFRNTLKAARDSDGSSTDDETANVPLTEIRQQLMKKTSLRTGSPLTDSQVDRDLG KMSLAAYAKASDFPVLSQENTVDCQDHIQRKVQGAIRSWSDCESKRSVSDADSPLDQVVI ISDTSSDEDENKVNDGRKNKKENMPACLEKPSGAQGQERATTSNYPALYDECESQCFEFE TDEEIFSVWQDSQMEEETEDKGLAVKPSSCLISHDLEVARQLNDWGYDTDYLKEDIIEKA ADELEQQVKGSRNEAKASSARSSKGHASRGSETVCPKHVAKKRADGAVGPTASRSAGSSA PKPAGENLRLGKSAVKSQQAKTANKQAEKRSAKPNAHNKKLPTPTPFIVPPRKVHHFPEP TSAVEKLGLKKKPRKAAEMSQRTQDSLAELRNYGKTAGKLSPQKRKTKLIQPPNMIVRNK KLLASQERQFYKQSRERVQGSSGGSPRTQSRKTAKKADAKGCEPPANIVGVKNQKERAAC FRRSSGEKSLLRQSSLEREGAQPAPGSPVKKAAVSTKEEPTLSHAKGQESPAPVPGSLFH PLTGNHRTDTSVFLGSSSKLCHESTTLKESEAMVVEDIFGEDDGLFLTQRDPVDMELSSQ MDDEDMEAIIVQSPLEDHSFSGEKLKHAGCTEQVNKAGVCLGNHPAPDPPDHMFAKPLAP PRPSTTKIFSSSSSSRSANLTKDLDHVQKPAWRSRSNPGSSNGSDGLKLKTPTFSSIFQP QSLNNFLSHRHNNHAVERGRMLTAISFKQDANPAFSQANIASVRPKNDDTFIEEILKWTY NMFIDLGQLGAPNHLLTPIVASVPVKFQNYDDHFNTFFPLMMLNAFEEVASDWQENQKAK EAKPFFLNLQDFNAQVQTAEFRVTILESDLDKQLYPKEYDLVFLRVSEKRREGESRSNLV YHVGLVIRFSRVPEDKKQQHVACHLSIKTRGNLSRVDQQVQCVVVSSLASTKRRFRALLL LKRSPLINAILSPSYSNFCPSSMNMDCQKSASYMGEYNEDQWKAIETAYTMVTQHPSLPK ICLIHGPPGTGKSKVIVGLVCRILGERSGKETPMQSWNAKNKQNRVLVCAPSNAAVDELM KKIILEFKGKCPDMKKALDKTAPGKDQDLQRRKADLDRQLDMLSRQRAMNRGEAEKKQQL DEKITRLSKERERLASQLKEIRHVSQEMQAKIILASHIICCTLSTSGIALLETTFRRQGS DPVSCVIVDEAGQSCEVETLIPLIHGCKKLVLVGDLKQLPPTVKSMKAQEYDYHQSLMGR LWRHQKEQLQEGQSGTPPVLQLTIQYRMHPEICLFPSKYIYDHALKTDRQTEVSRFSLDW PFQPYLLFDVLDGREERDNGSYVNPQEIKLVIELLKLIRERRSSIGRNIGIITPYSAQKR RIQKQLDAEFRENSFGEVDTVDGFQGREKDCVIVTCVRANSTQGSIGFLRSLQRLNVTIT RAKHSLFILGKLKTLMENHDWNELIQDARKRGSIIPVPSHKYKSCALRILKARLLPRPGA AVPERATQGQTGMGRAEQSEASSRDPQRPPASAGAPSRGSCAPPPPSGPQEHSSRKLCAQ ATPPVETPRDPRLAQRAEAAMDLRACRDVRCSPSSSSGAVLPQGPGSPGAQRSWSNAMQE PASRTETPGHSAPRVHPPGIPSCARPHKAQEHDWRVPDKAETLGSGDPRSPTEWGQAQDY HPRLRRPSEFLENQSPLDIKRRRTNY NT seq 7281 nt NT seq  +upstreamnt  +downstreamnt atggagcaaatcaacttttcctatcaggtgattggcaaacatccagggatctatctcctc atggtccatcccaacgaagtgatccgccggtgggccctcctgacagccaggaacctgggg aaggtggacagggacgactactacgacatccaggaagtcttgacgtgcttgttcaaagtc atcgaactgggcctcttcgaaaacccagatatctacaactcatccgtgtttgagaagggg aagctcatcctgttgccttcccacctgtatgataccaccaaccacaagaactactggctt ggcatctgcatgttgttaacggtgttggaagagcaagctatggagacgctgctgcttggc ccagacaagcagaatgacttcatgcaatccataatgaacaccatgaagaaagaagcagat gacggacgtgacgatcctttctggcctgcgctccactgtttcatggtggtcttggataag cttggatccaaagtgtggggccagctcattgatccaatccaggcatttcaaactataatc aacaatacaagttatattaaagaaatagagcacattcgtcagagttgcagaaggacaaaa tctgagccaccgtcagactacggagatgaaatgattacctgcagccagattgtatataac taccacccggaaaagccacacaaggacattggctggaggactgctgtctgtccagattac tgccccaatttgtatgaggatatgcagaccctgagcgacatgttccagtccgaaattggc cgagacatgcagctgcacaacagcaccttcctgtggttcatccctttcgtgcactccctg atggacctcacgaacataggcgtcgcctacggcgtcgagatcatccgtcacttgtgctcg gaggtcagggtggtccccagcgatgcccttcagggtggcgacaaagtgtctgagttcttc atctggatcctggtgacggtggtcgagctcagcatcaaaagaaattgctttcagtcgctg tggatctgctcggaaaagtgggtggagaccgtggtgaaatgcgccacccttccaagcaca gtcttcgcctgtgctgccgagaggggagggaccagaagctgccctagaagcgcatcggcc atctcctcctgggaacacgggtcagtccagtctgcttgcatgaatctgatccgtaacatc ctgaaggaaggctaccaggtcgggcagaaagcaacgccgttcctcgacgaactgaacctg cttcggcgcagccacaaggactggaacctgagccccgagcgggcgctggagctgcaaacc tgcctgaagcagatcatctggcaaagaaagttgaaccctgtgcctcacgtggagagcccc actgcctgtgtatctccgccctctctttcagtaaagctggagtggcaggaggacaggtgt ctggcagatgcagactacaggcatgggccgtacttgtccccgagaggaagggatgacgtc tgcctggagggctcatcacccaggaaaaaccctggtctgggcaaggagcagtgtgcacgc tctcctaaagaccagcctcttcatcgaacttcagagtgccttttgagcaacgttaaacaa gaacccaaagagagtttggtgcaggagagcaataacttgagattcatgttcgcaaaagga cacagagatgcccagaaaaatggaagggttttccaagggttgggggatcagagtgaatca gatgccacctctaaaagttgtttcgaacaagcctttcagaatatggagaaaaaagaggtc ataccgaaggaggagaaagccagctgtctggctgaaaataatcacagcgacaggaatggc cacagtgcttcaaagaccaaggtcggtctgaataaccttgtgaacaaaaatgaatcgaag aagccagacttgaccttgaaactaaagcagttgtttggaaatcagaagagcaaaaaaccc gcatccgggccagatacagacaagccgctgcctgctaacagcggaagcagtggctgggaa cggccaaggggggaggttgctgcaccaagctgtggcacatcaaacgtgtcactctgcaaa ctggaaacgagctcaagtgatgcttttcagggcaagcccctctgcataaaaagggagtcc aaggatacactggccgactttagaaataccctgaaagcagcacgggattcagatggaagc agcactgatgatgagacagccaatgttcctcttacagagatcaggcagcagctgatgaaa aagacatcccttcgcacgggaagcccactgaccgattctcaggtcgatagagaccttggt aaaatgtccttagctgcgtatgccaaagcaagcgattttcctgttttgagccaggaaaac acggtcgactgccaggatcacattcaaaggaaagtgcaaggtgccatccggtcctggtcc gactgtgagagtaaaaggtcagtgtctgatgcagacagtcctctggaccaagttgtcatc atttcggacacatcctccgatgaggatgaaaacaaagtgaatgatggtagaaagaacaaa aaagagaacatgccagcttgtcttgagaagccgtccggtgctcagggacaagagagagcg accacatcaaattacccggctctgtatgatgaatgtgaatcacagtgttttgagtttgag accgatgaggaaattttctctgtttggcaagatagtcaaatggaggaggaaacagaggac aaaggcctggcagtgaagccaagcagctgcctcatatcccatgacttggaggtggccagg cagctcaatgactggggttatgatacagactatcttaaggaggatatcattgaaaaagca gcagatgagcttgagcagcaagtgaaaggcagcagaaacgaagccaaagcttcgtcagca cggtccagcaaagggcacgccagcagaggaagtgaaaccgtttgcccaaagcatgtcgcg aagaagcgtgccgatggtgctgttgggcccactgcatcacgctcagcaggttcttctgca ccaaagcctgctggtgaaaacctgaggctggggaagagtgcggtgaaatcccagcaggct aaaacagcaaataagcaagccgagaaaagaagcgccaagccaaacgcgcacaacaagaag ctgcccacgccgactccttttattgtcccaccaaggaaggtccaccattttcctgagcca acatcagcggtggaaaaacttggcttgaagaagaaaccccgcaaagcagcagaaatgtct cagcgtactcaagacagccttgctgaattgcgtaactatggtaaaactgctggcaagcta agtccacagaaacggaagacaaaattaatacagcctcctaatatgattgttagaaacaaa aagttgttagcctctcaggaacgccagttctacaagcagtcgagagaaagggttcagggc agcagtggagggagtcctaggacccaatccaggaaaacagcaaagaaagcagatgcaaag ggatgtgaaccgcctgccaatatagtgggggtcaaaaatcagaaggaaagggctgcttgc ttccggcgttctagtggtgaaaaaagtctgttaaggcagagctcactggagagagaggga gcccagcctgcacctggttctccggtaaagaaagctgctgtatcgaccaaggaagaacca accctttcccatgcaaaaggccaagaaagccctgctcctgttccaggcagtttatttcat cctctgactggaaatcatagaacagacacttcagtctttctgggttcttcctcgaaactt tgccatgagagtactactttgaaagaaagtgaagctatggttgtggaggacatctttgga gaggacgatggcttgtttttaacccagagggaccccgtggacatggagctgagttcacaa atggatgacgaagacatggaagcaataattgtccaaagccccttggaggatcactccttc agtggtgagaaactgaagcatgcaggttgtacagaacaggtgaataaagcaggtgtctgc cttggaaaccatcctgctcctgacccaccagaccacatgtttgccaagcctttggcacct cccagaccttccacgactaagatcttcagctccagctcttcttcacggagtgccaacctc accaaggaccttgaccacgtccagaagcctgcttggaggagcaggtcaaatccaggcagt tctaatggctcagatggtctgaagctcaaaaccccaacatttagtagtatttttcagcct cagagtttgaacaacttcttgtcacatagacacaataaccatgctgtggaaaggggcaga atgctgaccgccatcagtttcaagcaggatgcaaacccagccttttcacaagcaaatatt gccagcgtcaggccgaaaaacgacgacactttcatcgaagagatcctgaaatggacctac aacatgtttatagatcttggtcagttgggggcgccaaatcacctcctcacacctatcgtg gcctctgttccagttaaatttcagaattatgacgaccacttcaatacgttcttccccctg atgatgctaaatgcctttgaagaggtggcaagcgactggcaggagaaccagaaagcaaaa gaggccaagccgttcttcttgaatttgcaggacttcaatgcacaagtgcagacagctgag tttagagttaccattttggaaagtgatctggataaacagctgtatccaaaggagtatgac ctggttttcttgagagtgtctgagaaacgccgtgaaggcgagtcgaggagcaatctggta taccacgttggcctcgtgattcggttttctcgggttccagaagataagaagcagcagcac gttgcctgccacctctccataaagacccgaggaaacttgtcccgtgttgatcagcaagtc cagtgtgtggtggtcagttctttggcatctacgaagcgcaggttccgggccttgcttttg ctgaagcgcagccccctcatcaatgccatcctcagcccaagttacagcaacttctgtcca agcagcatgaacatggactgtcagaaatccgcgtcttacatgggagaatacaatgaagat cagtggaaagccattgaaactgcttacacaatggtgacccagcatccatcgttgcccaaa atttgcctgatccatgggccacccggaacagggaaatcgaaggtcattgttggactagtg tgccgcatccttggtgagagatctgggaaggagactcccatgcaaagctggaatgccaag aacaagcaaaatcgtgtgctggtttgtgcaccgtcaaatgccgccgttgatgaactgatg aagaaaataattcttgaatttaaaggaaaatgccctgacatgaagaaggctttggataaa acggcacctggcaaagaccaagacctccaaaggaggaaggccgacctcgatcgccagctg gacatgctctcccgccagcgtgcaatgaacagaggcgaggcggagaagaaacaacagtta gatgaaaaaatcaccaggctttccaaagagagagagaggcttgcttctcagctgaaggag attcgccacgtctcccaggaaatgcaagcgaaaatcatcttggcgtctcacatcatctgt tgcacgctgagcaccagtggtatagcgctgctggagaccactttccggaggcagggcagt gaccctgtcagctgcgtcatcgtggatgaggcagggcagagctgcgaggttgaaaccctc atcccgctcattcacggctgcaagaagttggtccttgttggagacctcaagcagctgccg cccactgtgaaatccatgaaggcgcaggagtacgattaccaccagtctctgatgggccgg ctgtggaggcaccagaaggagcagctgcaggagggccagagcgggaccccgcccgttctg cagttgacgatccagtacaggatgcacccggagatctgcctcttcccttccaagtacatc tatgaccacgccttgaagacggacaggcaaacagaggtgtcccgattctccttagattgg cctttccaaccatacttgctcttcgacgtgttggatggcagggaagagcgggacaatggg tcctatgtgaatccccaggaaataaagctggtgatagaattgctgaagctcattagggaa aggcggagcagcatcggtcgcaacatcggcatcatcaccccgtacagtgcacagaagagg agaatccagaagcagctggatgcagagtttagagaaaatagcttcggggaagtcgataca gtggatggtttccagggccgcgagaaggactgcgtcatcgtgacctgcgtccgtgccaac agcacgcagggatccatcgggtttttgagaagccttcagcgtctgaatgtcacaatcaca cgggccaaacacagccttttcatcctcggaaagctgaaaacgttaatggagaaccatgat tggaatgagttgattcaggatgcgcggaaaagggggagcatcatcccggtgcccagccac aagtacaaaagctgtgctctgaggatcctgaaggccaggctgcttccccgccctggagct gcggtgccagagagagccacgcaaggccaaacgggcatgggcagggctgagcagagtgaa gcctcaagccgagacccccagcgccccccagccagtgctggtgctcccagcagggggagc tgtgcgcctccgcctccctctggacctcaggagcactcctcccggaagctgtgtgcacaa gccacgcctcctgtggagacaccgcgggacccccgactggcccagagggcagaggcagcc atggatctccgggcttgcagggacgttcgttgctcaccctccagcagctcgggagcagtg ctgccacagggccctggcagccccggggctcaaaggagttggagcaatgccatgcaggag ccagcttccaggacggaaacgcctggccactctgccccaagggtgcatccaccgggaatt ccttcctgcgccaggcctcacaaagcccaagagcatgactggcgagtccctgacaaggca gagactttgggcagcggggacccgcgaagccccaccgagtggggacaagcccaggactat caccccaggctcaggaggccctcggagtttctggagaaccagagtcccctggatatcaag cggcggcggaccaactactag

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