Varanus komodoensis (Komodo dragon): 123028922 Help Entry 123028922         CDS       T07701                                  Symbol RTCB Name (RefSeq) RNA-splicing ligase RtcB homolog   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism vko  Varanus komodoensis (Komodo dragon) Brite KEGG Orthology (KO) [BR:vko00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:vko03016]     123028922 (RTCB) Enzymes [BR:vko01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      123028922 (RTCB) Transfer RNA biogenesis [BR:vko03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     123028922 (RTCB)  Prokaryotic type    tRNA splicing ligases     123028922 (RTCB) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RtcB Cu-oxidase_4 Motif Other DBs NCBI-GeneID:  123028922 NCBI-ProteinID:  XP_044297215 Ensembl:  ENSVKKG00000007365 UniProt:  A0A8D2J975 LinkDB All DBs Position Unknown AA seq 505 aa AA seqDB search MSRSYNDELQYLDKLDKNCWRIKKGFVPNMNVEGVFYVNDPLEKLMFEELRNACRGGGAG GFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPQAVVSPGGVGFDI NCGVRLLRTNLDECDVQPVKEQLAQSMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSL REGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDDIYNE YAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIAS QEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDMHVIYDVSHNIAKVEQ HVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMT ETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTD VVNTCHAAGISKKAIKLRPIAVIKG NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgagcagaagctacaatgatgagctccagtacctggataaactggacaagaactgctgg cgcatcaagaagggcttcgtgcccaacatgaacgtggagggtgttttctatgtgaatgat cctttagagaaattaatgtttgaagaattaaggaatgcatgtcgaggtggaggtgctggt ggtttcctgcctgccatgaagcaaatcggaaatgttgctgcacttcctggcatagtgcac agatcaataggacttcctgatgtccattctggctatgggtttgccattggtaacatggct gcgtttgacatgaatgacccgcaggctgtggtatccccaggtggtgtagggtttgatatc aactgtggggtaagactgctgcgcaccaaccttgatgagtgtgatgtccagccggtgaaa gaacagcttgcacagtccatgtttgaccacattcctgttggtgtgggatccaagggtgtc atccccatgaatgccaaggatttggaggaagctctggagatgggggtagactggtcccta cgagaaggctatgcctgggctgaggataaagaacactgtgaagaatatgggaggatgctg caagctgatccaaataaagtctcagcaagagctaagaagcgggggctgcctcagctgggg actttgggagcaggaaaccattatgctgagatccaggttgtagatgacatttataacgag tatgctgccaagaagatgggcatagatcacaagggccaagtgtgtgtgatgatccacagc ggcagcagaggccttggccaccaagtagctacagatgccctggtagctatggagaaggct atgaaacgggacaagatcatcgtgaatgaccgccagctggcatgtgccaggattgcttcc caggaagggcaggattacttgaaaggaatggcagcagctggaaactacgcatgggtcaat cgttcttccatgactttcctcactagacaggcatttgccaaagtcttcaataccacccct gacgatctggatatgcacgtgatctacgatgtatctcacaacattgccaaagtagagcag catgtggtggatggaaaggagcggaccctgttggtgcacaggaaaggatcgaccagagct ttcccacctcaccaccccctcatagctgtggattatcaactgactggccagccagtgttg attggtggaacaatgggaacttgcagctatgtccttacaggcacagagcaaggcatgaca gaaacctttggaaccacctgccatggagctggccgtgcattgtcccgggcaaaatctcgg cgcaacttggacttccaggatgtattagacaagttggcagacatgggaattgcaatacgt gttgcttcccctaaactggtcatggaagaagcaccagaatcttataagaatgtgactgat gtggtgaatacctgccatgctgctggcatcagtaagaaagccatcaaattgagacccatt gcagtcatcaaaggctag

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