Varanus komodoensis (Komodo dragon): 123029230
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Entry
123029230 CDS
T07701
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123029230 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vko04515
]
123029230 (ROBO1)
Cell adhesion molecules [BR:
vko04515
]
Immunoglobulin superfamily
ROBO family
123029230 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
Ig_J_second
Big_4
Motif
Other DBs
NCBI-GeneID:
123029230
NCBI-ProteinID:
XP_044297844
Ensembl:
ENSVKKG00000010964
LinkDB
All DBs
Position
Unknown
AA seq
1618 aa
AA seq
DB search
MIAEFVHFYLFGLICLSTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT
IRGGKLMITYTRKNDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTADDSA
EFNCEARGDPVPTVRWRKDDGELPKARYEIRDDHTLKIRKVTAGDMGSYTCVAENMVGKA
EASATLTVQVVSEPPHFVVKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSSNRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSITTKAYLEVTDVIADRPPPV
IRQGPVNQTVAVDGTLVLSCVATGTLMPTILWRKDGILISTQDSRIKQLETGALQIRYAK
LGDTGRYTCIASTPSGEASWNAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNT
VMLSWKPNLNSGATPTSYIIEAFSHAAGSSWQTVAENVKTETFAVKGLKPNAIYLFLVRA
ANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWT
VDQQSQYIQGYKILYRPATASQGESEWLIFEVRTPTKNSVVIPKLKKGVNYEIKARPFFN
EFQGADSEVKFAKTLEEAPSAPPQSVSVTKNDGNGTAIVITWQPPPEDTQNGMVQEYKVW
CLGNESRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSEPQFIQLDSHGN
PVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRTGLASTYAGIR
KVPSFTFTPTVTYQRGGEAVSSGGRPGLLNINEPATQPWLADTWPNTGNNHNDCSINCCT
SGNGNSDSNLTTYSRPADCIANYNNQLENKQTNLMLPESTVYGDVDLSNKINEMKTFNSP
NLKDGRFVNQPGQPTPYATTQLIQSNISNNVNSSSGDSNEKHWKPSAQQKQEVAPIQYNI
MEQNKLNKDYRANDNAPTIPYNQTYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKATKQ
AGMNWADLLPPPPVHPPPHSNSEEYSLSVNESYEQENPCPVPPARMYLQQDELEEEEEDE
RGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCQEEIAHLQHPPDRRRQPV
SPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEVDLEVAKMQNRRLLLRGLEQTPA
SSVGDLESSVTGSMINGWGSASEDDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGL
KVARRHMQDAVGGRRHYHAAHCPRPTSPVSTDSNMSAAVIQKVRPAKKQKHQQGHLRREV
YTDDLPPPPVPPPAIKSPTAQSKSQLEVRPVMLPKLSSIEPRTERAVERKGTGYKGKEGA
NGRQHSDMRTGSGERREPQEQQNDNKLRGNKAGRRDGTPAKTHLLQEDILPYCRPTFPTS
NNTRDPSSSSSMSSRGSGSRQRAEQANLGRRNIAEMQVFGTYEQGEDEEEELQVMCNH
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagagtttgttcacttctatctctttggattaatatgtctgtctacaggttcc
cgtcttcgacaagaggatttcccccctcgaattgttgaacatccttcggatctaattgtt
tccaaaggagaaccagcaactttgaattgcaaggcagaaggcagaccaacaccaactatt
gaatggtacaaaggaggagaaagggttgaaactgacaaagatgatcctcgttctcatcgg
atgttgctgcccagtggatctttatttttcttacgcatagttcatggtcgcaaaagtaga
cctgatgaaggagtatatgtctgtgtagcaaggaattacctcggtgaagctgtgagccac
aatgcatcattggaagtagcaatactgcgtgatgacttcagacaaaacccttctgatgtt
atggtagcagttggtgaaccagctgtgatggaatgccaacctccaagaggtcatccagaa
cctaccatttcatggaaaaaagatggatctcccctggatgacaaagatgagagaattaca
atcagaggaggaaaactgatgatcacctacacaagaaagaatgatgctggcaaatatgtc
tgtgttggaacaaacatggtgggagaaagagagagtgaggtagcagaactcacagtttta
gaaagaccatcatttgtgaagagaccgagtaatttggctgtaactgccgatgacagtgca
gagtttaattgtgaagcacgtggtgatccagtgccaacagtaagatggcgaaaggatgat
ggagaattacctaaagcaagatatgaaatccgtgatgaccacaccttgaaaattcgaaaa
gttacggcaggagacatgggttcttacacatgtgttgcagaaaatatggttggaaaagca
gaagcatcagcaactttaacagttcaagttgtatctgagccaccacattttgttgtgaaa
cctcgtgaccaggtggcagcactgggcagaactgttactttccagtgtgaagcaactgga
aatcctcaaccagccatattttggcgaagagaaggaagtcagaacctacttttttcatac
cagcctcctcagtcttccaatcggttttctgtgtctcaaacgggtgatctaactattacc
aatgttcagcgttctgatgttggatactatatttgccagactttaaatgttgcaggaagc
atcacaacaaaagcatacttggaggttactgatgtaattgcagaccgacctccccctgtc
attcgacagggtcctgtaaatcaaactgtagctgtggatggtaccttagtactcagctgt
gtggccactggcactctaatgcccacaattctctggagaaaagatggcatccttatttct
acacaggattcccgaataaagcagctggaaactggtgcattacagattcgatatgccaag
ctgggtgatactggtcggtacacctgcattgcctccactccaagtggtgaggcatcatgg
aatgcttatattgaagtccaagaatttggagttccagtgcagccaccaagacccactgac
cctaacttgattccaagtgcaccatcaaaacctgaagttactgatgttagcagaaatacc
gtaatgctgtcatggaagcctaatttgaattctggtgcaacaccaacctcttatataata
gaggccttcagccatgcagctggcagcagctggcaaactgtagcagaaaatgtgaaaaca
gaaacatttgcagttaaaggactgaaaccaaatgcaatttatctgttccttgtacgggct
gctaatgcatatggaattagtgatcccagccagatatctgatccagtgaaaacacaagat
gttccaccaacaagccagggtgtggatcacaagcaagtacagagggagttgggtgatgtc
gttctacatctccataatcccacaattctttcttcttcctcaattgaagttcattggaca
gttgaccaacaatcccagtatattcagggatacaaaattttgtacaggccagcaactgct
tctcaaggagagtcagagtggttgatttttgaagtaaggacgccaacgaaaaatagtgtt
gtcattccaaaactcaaaaaaggagtgaactatgaaattaaggctcggcctttttttaat
gaatttcaaggagctgatagtgaagtgaaatttgctaaaactctggaagaagctccaagt
gctcctccacaaagtgtatcagtaaccaagaatgatggaaatggaactgcaattgtaata
acttggcagcctcctccagaggacacacagaatggaatggttcaggaatacaaggtctgg
tgccttggcaatgaaagtcgataccacataaataagacagtggatggttctacattttct
gtggtaatcccttccctagttcctggcattcgatatagtgtggaagtggcagcaagtact
ggagctggagctggagtgaaaagtgagcctcaatttattcagttagattctcatggaaat
cctgtgtcaccagaagaccaagtcagtttagcccagcagatttcagatgttgtcaaacag
ccagcgttcattgctggaattggtgctgcctgttggattatcctgatggttttcagcatt
tggttataccgccacagaaagaagcgaactggtctcgctagtacttatgctggtataaga
aaagtcccgtcttttaccttcacaccaacagtaacatatcaaagaggcggagaagctgta
agcagcggaggcaggccaggtcttttaaacatcaatgaacctgctactcagccatggctt
gctgatacatggcctaatactgggaataatcacaatgactgctctattaactgctgtaca
tcaggcaatggaaacagtgacagcaacctcactacctatagtcggccagctgattgtata
gcaaattacaacaatcagctagaaaacaagcaaacaaacttgatgcttcctgagtcaaca
gtttatggcgatgtggatttaagtaacaagatcaatgaaatgaaaactttcaatagccca
aatctaaaagatggaagatttgtcaaccagccaggacagcctacaccttatgctactact
cagcttatccagtcaaacatcagcaataatgttaacagcagcagtggtgattcaaatgaa
aaacactggaagccatctgcacagcagaaacaagaggtagcacctattcagtacaacatt
atggaacaaaacaagttaaacaaagattacagagcaaatgacaatgcaccaactatccca
tacaaccaaacctatgatcagaatacaggtgggtcttataatagctcagatcgaggaagc
agcacatctgggagtcaaggacacaagaagggggctagaacccctaaggcaacaaagcag
gctggtatgaactgggcagatctacttccaccccctcccgtacatcctcctccacatagt
aacagtgaagaatatagtttatcagttaatgaaagctatgaacaggaaaatccatgtcca
gtaccaccagcaagaatgtatctacagcaggatgaactagaggaagaggaagaagatgaa
cgaggtcccacaccgccagttcgaggagcagcttcatctccagcagcagtgtcctacagc
catcagtccactgccacattaactccttccccacaagaagaactccagcctatgctacaa
gattgccaggaggaaatagcccacttgcaacacccaccagatcgaaggcgtcaacctgtg
agtcctcctccacctccaaggcctatttctccaccacatacgtatggttacatttcggga
cctcttgtatcagacatggatactgatgcaccagaagaggaagaggatgaagtggaccta
gaagttgccaagatgcaaaacagaaggcttcttttgcgtggccttgagcagaccccagcc
tcaagtgtaggagatctggagagttctgtaacaggttccatgatcaacggatggggttca
gcctcagaagatgacaacatttcaagtggacggtctagtgttagctcctcagatggatcc
tttttcacagatgcagattttgcacaggctgttgcagcagcagcagaatatgctggtctt
aaagtagcaaggcgtcacatgcaggatgctgtgggaggccgtagacattatcatgctgca
cattgtccaagacccaccagtcctgtttctactgacagcaacatgagtgctgctgtaatt
cagaaggtccgacctgccaaaaagcaaaagcaccagcaaggacatctgcgcagagaagtc
tacacagatgacctaccacctccaccagtgccacctcctgctataaaatctcccactgcc
caatccaaatctcaactggaggtacggcctgtcatgttgccaaagttgtcttctatagaa
ccaagaacagaaagagcagtagaaagaaaaggaacaggctataagggaaaagaaggcgcc
aatggccgtcagcattctgacatgcggacaggttcaggtgagcgccgagaaccacaggaa
cagcaaaatgataacaaactgcgaggaaacaaagcaggcaggcgagatggcacaccagca
aaaacacatcttctccaagaggatattctgccatattgtagacctacatttccaacatca
aataacactagagatcccagttcctcaagttccatgtcatccagaggatcaggcagtagg
caaagggcagagcaagcaaatcttggtagaaggaatattgcagaaatgcaggtatttgga
acatatgaacaaggagaggatgaagaagaagaattgcaggtaatgtgtaatcattaa
DBGET
integrated database retrieval system