Varanus komodoensis (Komodo dragon): 123029501
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Entry
123029501 CDS
T07701
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vko03021
]
123029501 (SCAF4)
03041 Spliceosome [BR:
vko03041
]
123029501 (SCAF4)
Transcription machinery [BR:
vko03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123029501 (SCAF4)
Spliceosome [BR:
vko03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
123029501 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
XMAP215_CLASP_TOG
RRM_occluded
API5
Motif
Other DBs
NCBI-GeneID:
123029501
NCBI-ProteinID:
XP_044298537
Ensembl:
ENSVKKG00000008593
UniProt:
A0A8D2JGG9
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFCKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGASSTASMTEDATNNEGSPPPATTIPSEPPQVASNAVPTVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPVIDNNVMAQVHAITAQLQTTTTQP
SEQKHDFPAPEQKTSFDKLLDRFDYDDEPEAVEDSKKEETTTSPSVPQPAYGFPGEGMQQ
AVYPQLPNMDQFQQRMLGMQQDPMLHQVPLPPNGQMQNYGLLPTSQFPPMAQPVMQPSPQ
VQQSFQPSFAAQSEPHIQKAHQQEMEVDQPPVQEGKRQENRKSRSRSASRSPKRRRSRSG
SRNRRSRHRRSRSRSRDRRRHSPRSRSQERRERERDRARRTKGLPPIRPETVSVCSTTLW
VGQLDKRTTQQDVGGLLEEFGPIESINMIPPRGCAYIVMEERQDAYHALQKLSRGNFKVN
QKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWGKVKPEDLESFCEGGMLDSETLSPKWK
GISKKTENQVAQNGGAGGGETAHNEQTSPIAKSLSVQMPVPIPAPITVPPPQVPPHQPGP
PMVGTIQPPTFTPPLGIPPPGFGPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPINPP
VSVPPVSVPPSAAVNIPNSTVANINEDTTKDSSVGNPIPTVVSGSRGNAENSDSSKGYPN
APPPTTSTSIPAPVTQPVPLLGSQGVTPSPVIGLQTPSTGLLGARPGLIPLQRPPGMPPP
HLQRFPMMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKGPFPPPGHFVRPGGGPGGPDDN
RDGRQFRNDRQPFTPNRDQERFGRRSFGNRIENERERYGNRNDDREHERLGNRERREWGR
RSPERDRHRDLEERNRRFSGQRERDSRDRESRREKDENRGKEKPELTDRVDVKNHESQSS
KVENTDSISELNKEESEPTGVKPAEELTPETTSSLDQPEKSAGSVEEAPR
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaacgccttcaaccaggagctcttctcactgatggagatgaaacctcct
atttctcgtgcaaagatgattctcattactaaagctgccattaaagctattaagctttac
aagcatgtagtccagattgtagagaagtttataaaaaagtgtaaaccagaatataaagtt
cctggattatatgttattgattctattgttcgtcagtctcgtcatcagtttggaacggat
aaggatgtttttgggccaagattctgtaaaaatataactgccacattccagtatttatat
ctttgcccatcagaagacaagagtaaaatagttcgtgtcctcaacttatggcagaaaaat
ggagtgtttaaaatagaaataattcagcctctcctggatatggcagcaggagctagtagc
acagcttcaatgactgaagatgccacaaataatgaaggttcaccacctcctgccacaaca
attccatccgagcccccccaagttgcttcaaatgcagtacctacggtgccacagttgccc
agttctgatgcctttgcagctgtagctcagttatttcaaacaacccaaggacaacagctc
caacagatacttcagacttttcagcaacctccaaaacctcaatctccagtgatagataat
aatgtgatggctcaggtccatgctattactgctcagctgcagactacaacaacacaacca
tcggaacaaaagcatgatttcccagcaccagagcaaaagacatctttcgataagctgttg
gatcgatttgactatgatgatgaaccagaagcagtggaagactccaagaaagaggagaca
acaacatctccttcagtccctcagccagcatatggatttccaggtgaaggcatgcagcaa
gcagtttatccccagcttccaaatatggatcaatttcaacagcgaatgctgggaatgcag
caagaccccatgcttcaccaggtcccacttccaccgaacggacaaatgcaaaactatgga
cttttacctacatcgcaatttcctcctatggctcaacctgtcatgcagccttcacctcag
gtgcagcagtccttccaaccttcttttgcagcacagagtgagccacatatacagaaggca
catcagcaggaaatggaagtggatcagcctcctgttcaggaaggaaagagacaagaaaac
agaaagtcacgctctagatcagcatcaaggtcacccaaaaggagaagatcacggtctggt
tctcggaatcggagatcacggcatcgtcgttctcgatcccgatcccgagacaggcggcgc
cattctcctaggtcacgatcacaagaaaggcgtgaaagggagagagatcgggcacgcaga
acaaaaggccttccaccaatcagacctgaaactgttagtgtttgcagtacaacactctgg
gtaggacaactggacaaacgaacaacgcaacaggatgttggaggtcttctagaagagttt
ggcccaattgaatctataaatatgataccaccaagaggatgtgcttatattgtaatggag
gaaagacaagatgcataccatgccctgcagaaactgagtcgtggtaactttaaagtgaat
cagaaatctataaagattgcatgggctttaaacaaaggaattaaaccagactataagcag
tattgggatgtagaattgggtgttacctacataccatggggtaaagttaagcctgaagat
ttggaaagcttctgtgaaggaggaatgttggacagtgaaacgcttagtcctaaatggaaa
ggaatttccaaaaaaacagaaaaccaagtagcccagaatggaggtgcaggaggtggagag
actgcacataatgaacaaacttcacctatagctaaatctttgtcagttcaaatgcctgtt
cctatacccgcaccaataactgtgcctccaccacaggttccaccacatcagccagggcct
ccaatggttggtacaattcagccacctacatttacccctccattaggaattccacctcct
gggtttggtcctggagttcctccaccgccacccccaccatttttgagaccaggattcaat
ccaatgcatttgccaccaggttttcttcctcctggaccaccacctcctattaatcctcca
gtttcagttcctccagtctctgtcccaccttctgcagcagtaaatatcccaaactctact
gtggccaatataaatgaagacactacaaaagactcttctgtgggaaacccaattccaaca
gtagtttctggatctagaggaaatgctgaaaattcagatagctccaaagggtatccaaat
gctccaccacctacaacctccactagtataccggctcctgtcacacaaccagtcccactc
ctgggttctcaaggagttacacctagtcctgttattgggctccagacaccttctacaggc
cttttgggtgcacggcccggtttgataccgctccagcgacctccaggaatgccaccacct
catttacaacggtttccaatgatgccacctcggcatatgcctccccatatgatgcacaga
ggtccaccgccaggtccaggaggctttggaatgcctccacctcatgggatgaagggccct
tttccaccacctggtcactttgtgaggcctggaggggggcctggtggacctgatgataat
agagatggaaggcagttcaggaatgataggcagccatttactccaaatagagaccaggaa
agatttggaaggcggtcctttggaaatcggatagaaaatgagcgtgaacgctatggtaac
cgcaatgatgacagagagcatgaacgtcttggtaatcgtgaaaggagagaatggggaaga
agaagccctgaacgtgatagacacagagacctggaggaaagaaatagacgtttcagtgga
cagagagagagagattctagagatagggaatctcgcagagagaaggacgaaaatcgagga
aaggagaaacctgagttgacagacagggtagatgtcaaaaaccatgaatcccagagtagc
aaagtagaaaacacagactccatttcagaacttaataaagaggagtctgaacccacaggt
gtaaaacctgctgaagagttaacacctgagactacctcatctcttgatcaacctgaaaag
tctgctggctcagttgaggaagcacctcgttag
DBGET
integrated database retrieval system
