Varanus komodoensis (Komodo dragon): 123029664
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Entry
123029664 CDS
T07701
Symbol
PCDH1
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
123029664 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vko01009
]
123029664 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vko04515
]
123029664 (PCDH1)
Protein phosphatases and associated proteins [BR:
vko01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123029664 (PCDH1)
Cell adhesion molecules [BR:
vko04515
]
Cadherins
Protocadherins
123029664 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
SARAF
EphA2_TM
Mid2
Motif
Other DBs
NCBI-GeneID:
123029664
NCBI-ProteinID:
XP_044298779
Ensembl:
ENSVKKG00000014821
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MAPEPALLPGDGRARRAFARPQGSRCGGREAARERPDGLLFCFLPAPPRFRMRQLVSCLG
LWLFLQLPGLGSGTRVVYKVPEEQPPNSLIGSLAADYGFPDVGHLYKLEVGSPYLRVDGK
TGDIFTTETSIDRESLRECQQLLPGEPCFLEFEVSITDLLSNSPRLLEGQIEVLDINDNT
PNFASPVITLAIPENTNIGALFPIPLAMDRDAAANGVASYELMPGSDAQKLFGLQVAEDQ
GEKQPQLIVMGNLDREQAESYDLTIRVQDGGSPPRASSALLRITILDMNDNAPKFEKPLY
EAELSENSPMGHSVLQVKANDSDQGANAEIDYSFHQASDVVRRLLRLDRASGLITVQGPV
DREDVSVLKFSVLAKDKGANPKTTRAQVVISVRDMNDNAPSIEIRGIGLVTHQDGMANIS
EDVPVETPVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASDTGSDSKKKYFLQTTTPLD
YEAVKEYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNDPVFSQSVTEVAFPENNSPDDVV
VEVSATDADSGSNAKLVYSLVADPASKGVFSIDPDTGEIQVKTVLDREQREQYDFLVVAA
DKGSPSRKGTASVTVSVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENA
RIHLSVEQDNGDFVIQNGTGTILSSISFDRERQSTYTFRLKAVDGGKPPRSAYVGVTINV
LDENDNAPVVISPSNGSYKHILPHTSPGQQVMSVGAEDIDSGINAELQYSITGGNPFELF
KISPQSGNITLEKEILRKHHGLHRLVVRVSDRGKPSRHGTALVHFYVNETLANRTLLETL
VGHSLDTPLDIDIAGDPEYERSKQRSNIVFGVIAGAVAVVLVIVLVVLVRYCRQREAKSG
YQAGKKETKDLYAPKQGGKGGKAKCRVRKSKPPKPAEPAEDEEETGLQKSLKFNLMNDSV
SDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPAANTFVGT
GDSNSTGSEQYSDYSYRTNPQKYPNKQLPHRRVTFSAANQAQDLQDPSQHSYYDSGLEES
ETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTE
FGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEERNTKMANLRL
LPTYSAFSNTSHEPCKDSPMEEIPLTQASDFPTATTPSSQSAKREIYL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggctccggagccggcgctgctccctggagacggccgggcccggcgagcgtttgcccgc
ccacagggaagcaggtgcggtgggcgggaggcggcccgtgagcgtcctgatggcctgctt
ttctgcttccttccagccccgccgcgcttcaggatgaggcagctggtctcctgcctcggc
ctgtggctcttcctccagctgcccggcctgggctccgggacacgcgtggtctacaaggtg
ccagaggagcagccgcccaactcgctgatcggcagcctggcagccgactacggcttcccg
gacgtggggcacctgtacaagctggaggtgggctccccctacctgcgggtggacggcaag
accggcgacatcttcaccacggagacctccatcgaccgggagagcctgcgcgagtgccag
cagctgctccccggtgagccgtgcttcctggagttcgaggtctccatcacggacctgctg
agcaacagcccccgcctgctggaggggcagatcgaggtgctggacatcaacgacaacacg
cccaacttcgcctcccctgtcatcacgctggccatccccgagaacaccaacatcggcgcg
ctcttcccgatcccgctggccatggaccgtgacgctgcggccaacggcgtggcctcctac
gagctcatgccgggctccgacgcccagaagctcttcggcctgcaggtggccgaggaccag
ggcgagaagcagccacagctgattgtgatggggaacctggaccgggagcaggccgagtcc
tacgacctcaccatccgcgtgcaggacgggggcagcccaccgcgggcaagcagcgccttg
ctccgcatcaccatcctggacatgaacgacaacgcgcccaagttcgagaagccactgtac
gaggccgagctctccgagaacagccccatggggcactccgtgctgcaggtgaaggccaac
gactccgaccagggcgccaacgccgagatcgactactccttccaccaggcctcggacgtg
gtgcggaggctgctgcgcctggacagggccagcgggctcatcaccgtgcagggccctgtc
gaccgggaagacgtcagcgtcctgaagttctccgtgctggccaaggacaagggggccaac
cccaaaaccacccgtgcccaggtggtgatcagcgtccgggacatgaatgacaatgccccc
tccatcgagatccgtggcatcggcctggtcacccaccaggacggcatggccaatatctcg
gaagatgtgcccgtggagaccccggtggcgctggtccaggtgtcggatcgggatgagggg
gagaacgccgtggtgacctgcgtggtggctggcgacgtgccctttcagctgcggcaggcc
agcgacacgggcagcgacagcaaaaagaagtacttcctgcagaccacgacgcctctggac
tacgaggcggtgaaggaatacaccatcgaaatcgtggccgtggactcgggcaacccgccc
ctgtccagcaccaactccctgaaggtccaggtggtggacgtgaacgacaacgacccggtc
ttcagccagagcgtgacagaggtagcctttcccgaaaacaactcccccgacgacgtggtg
gtggaggtgagcgcgaccgacgcggacagcgggtccaacgcgaagctcgtgtattccttg
gtggctgaccctgcctccaagggcgtcttctccatcgacccggacaccggcgagatccag
gtgaagacggtgctggaccgggagcagcgggagcagtacgacttcctggtggtcgcggcc
gacaagggcagccccagccggaaggggacggcctctgtcaccgtcagcgtcatggaccgc
aacgacaacgaccccaagttcatgctgagcggctacaacttctccgtcatggagaacatg
ccgcccctgagcccggtgggcatggtgaccgtcatcgacgcggacaagggggagaacgcc
cgcatccacctctcggtggagcaggacaacggcgacttcgtcatccagaacggcacgggc
accatcctctccagcatctccttcgaccgcgagcggcagagcacctacaccttccggctc
aaggcggtggacggaggcaagccgccccggtcggcctacgtgggtgtgaccatcaacgtg
ctggatgagaacgacaacgctcccgtcgtcatctccccgtccaacggctcctacaagcac
atcctgccccacaccagccccgggcagcaggtcatgagcgtcggcgccgaggacatcgac
tccgggatcaacgccgagctgcagtacagcatcaccggcgggaaccccttcgagctcttc
aagatctcgccccagagcgggaacatcaccctggagaaggagatcctgcgcaagcaccac
gggctgcaccgcctggtggtgcgcgtcagcgaccgcggcaagccctcccgccacggcacg
gccctggtgcacttctacgtcaacgagacgctggccaaccgcacgctgctggagacgctg
gtggggcacagcctggacacgcccctggacatcgacatcgccggcgaccccgagtacgag
cgcagcaagcagcgcagcaacatcgtcttcggcgtcatcgccggcgccgtggccgtcgtc
ctggtcatcgtgctggtggtgctggtgcgctactgccggcagagggaggccaagagcggc
taccaggcgggcaagaaggagaccaaggacctgtacgcgcccaagcagggcggcaagggc
ggcaaggccaagtgccgggtgcggaagagcaagccgcccaagccggccgagccggccgag
gacgaggaggagacggggctgcagaagtccctcaagttcaacctgatgaacgactcggtc
agcgacagcccccgcatccacctgcccctcaactacccgccgggcagccccgacctgggc
cgccactaccgctccaactccccgctgccctccatccagctgcagccccagtcgccgtcg
gcctccaagaagcaccaggtggtgcaggacctgccggccgccaacaccttcgtgggcacg
ggcgacagcaactccacgggctcggaacagtactccgactacagctaccgcaccaaccct
cagaaataccccaataaacagttacctcaccgccgagtgacgttctccgcagccaatcag
gcccaagacctgcaggacccctcccagcacagctactacgacagcggcctggaggagtcg
gagacgcccagcagcaagtcgtcctcggggccccgcatcggccccctggccctgcctgag
gaccactacgagcgcaccacccccgacggcagcattggcgagatggagcaccccgagaac
gatctccggccgctgcccgacgtagccatgacggggacctgcactcgggaatgcacagag
ttcggccactcggacacctgctggatgccagggcagtcctccccgagccggcggcccaag
aatgctctcaaactctccacctttgtgccttatcaagaccgagggagtcaagagcaagtc
gggaacggcagccccagactctccgaggagcgaaacaccaaaatggccaacctccgcctc
ctccccacgtacagtgccttctccaacacgagccatgagccctgcaaggactcccccatg
gaagaaatccccctcacccaggcctcggacttcccgacagcgaccaccccgtcctcccag
tctgccaagcgggagatctacctgtaa
DBGET
integrated database retrieval system
