Varanus komodoensis (Komodo dragon): 123030699 Help Entry 123030699         CDS       T07701                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism vko  Varanus komodoensis (Komodo dragon) Brite KEGG Orthology (KO) [BR:vko00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:vko03400]     123030699 (SPG11) DNA repair and recombination proteins [BR:vko03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      123030699 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Ogg-HhH Motif Other DBs NCBI-GeneID:  123030699 NCBI-ProteinID:  XP_044300738 Ensembl:  ENSVKKG00000016062 LinkDB All DBs Position Unknown AA seq 2172 aa AA seqDB search MCRGILFLLDKSGWIYVFDAAEGARLAQVNVSLYQAEGHEDKNSGTPCPLTLLRVARDLS VAVVANSSNYVAAIDLQLYFREYPDHLLCKRSFDNLPIEQLQGTDEDDIRSSDYNMKFVP CAFRTDRSWKACLSSLSNAAKRFQAPSLEAYRCPPWYQYLPHLEDYGYTPQEASKISLLQ DAAHVLATPRGKAQKRASIPDRGWKNIYSGDQEGCVSLECKSVTAFSALLTISTESEGLI LVLWDLETQDVRHACVGRNAVFVECSPEEQLGLVFSEPGLSFFLFGMTQQEFLNRLIIHG SAGTVDALCQLNAWGRCSIPVHALEAGLENRQLDTVDFFLKNKENLFSEFSACSFEDQPA SKMSALYLESMQELRPALDLLCKAIQENDLETQSKHFSEQLLNLTLSFLNKQLRDIFIHK EELDDNLNRCVDILTSYITKLRAFMIKFPHKPSGVGSLRCNLEDVPLIEQSAMWEEFSME QTVAEAILNNKLPEAQTFFQLTHNPACSLKALKRIGQDLVYKSLLNNDLKEASRLLRNMG FNVMEQLHRVCFYASNWRVRDFLVKTLQDKDYFSEAEKEMIDFVHRVEKVYSTALPEHEK KAAPCSYWRREQGLSAYSAALDALLNCCEDRVHNHEHRIMLNWARWWDRDTREMVLLPTQ SPGGEFKSCNPEVLWTYLTSWHDWASISAWIADSQPQDGGSDWPQLTAEAVEQRSLCSSF MHNEILDCLARNGTFVPAELENVERLLQRLALIGGVMQNPHPVLEHAPIAGGDFHVCVIH YCLERGLDHLLYTYLDYYSLCSSNCPILDDRSLHEAHPWFEFLVQCRRIASKPGDAAVIF HASLANAQVLIPSNQAGVSSMLLEGRTLLALASTMYAPGGIDRVLQDRDGGKKVDAQLFR MALIPYPKLRAALFPQCASHGALPSDVSLYHLAQALVPFDPSKLFGWQSANTLAIPDLPG ALPHFSCPALVNRGAILERLDFCHYLRHARPSFALASFVVQQLARSKTPKQLVQHAGSDA YALALSCFYVPSVVTACACFLELLGLESLKLRVDAQAANAILNFMSRSEEPQYESIRQSV VDKLRELADGEKRAAEELLVCLEEAVWDKTEQQKVQKTSGEARRQWALVVQFCRLHGIKR SPSYLRACARAHEWLPLITVAQMYGYPPTEVVPILQEFSPPLQNHLRLAFGSVLPPGARE GGQGRELSRPRPEHRPHATDLFCLLLHGQEPPHPWQDLLAAAVKHHVPALAVLAACLEGA GTVHCLCVWIVASLDRSTAAEVTKHVEGPVETHPWDLLDLAALWRRLLRRRKIRTLLHGF RFFLKGSPLLLLLEGYESCMEHRNYTEASARLLAFHGSVAKLQAVCEGPPPVPPVPWLES QAAFLLGLMPQQCRTPYELRRLLQLFADTGTALPHGADTKKLSALSYILRDSPLSVDRAI LTNYTAENFQNECSRILEQLQERSAFSTAREVAELAELPMDNIVIQEVLQNMHFLKQIGH WPQKRTRIEFWKKCNECFEKNGILNRAASGFFSAQADAVSSASPNDEGACCIIERQLLLS LAGHWLARGDPIPLEELEQVEREVWLCRIAQQTLCQRPRQARQRLSHQISVSGERSFESL AKEFSFSKLAALNVPEDLQLERLPAQEAPGAVLPEADRASLEVLIGQLLDEGSVHEASRA CRYFNFHSRDVSLVLHCRALASGEAPRSHFHADVRAILEAREEEESERSGEGGAQKRQLP STSVLGSGPCAGGECPGREVAASLQALGAECVHGRSYCRQVLCLYELSRELGCSFDEISA RDPEKLLRTILSSRRADRCRRAQTFIAAQGLGPDTVAELVAGEVTRELLAPAQGQGRQPA LNPAEGSQALLQLARLCPDPALVGKQLLERIAAVPPGELACTTELLILAHSCFSLTCHME GIIRVLQAARMLTEEHLAPSEEYGLVVRLLTGIGRYNEMTYIFDLLHEKHHFEVLMRKKL DSQSGALKTALLDYAKRRRPGDSEKHNMIALCFSMCREIGENHEAAARTQLKLIDSCPWE DCLQNVPHLKTLLMKALTLFIDAAESYSKDFCVHQSLHCNRLTKLITLQLHFLNTNRATQ LINLSRKNLLGCVMALPRFYQAAIVAEAYDFVPDWAEVLYQRVIVKGDFNYLEEYKQCGL LKASTFEEIAQK NT seq 6519 nt NT seq  +upstreamnt  +downstreamnt atgtgtagaggaatcctcttcttgttagacaagtctggatggatatatgtctttgatgcc gctgaaggtgcccgtctggcccaggtcaatgtttccctctatcaagcagaggggcacgaa gacaagaactcgggcaccccgtgtccccttaccctgctgcgtgtcgcacgtgacctgagt gtcgctgtggttgccaacagctccaactatgtcgcagccattgatctccagttatacttc cgagagtatccggatcacttactttgcaagaggagttttgacaaccttcctatagaacaa ctgcaggggacggatgaggatgacatcagaagttccgattataatatgaaatttgtgccg tgtgccttccggacagacaggtcctggaaggcgtgcctatcttccttatctaatgcagca aagagatttcaggcaccaagtttggaagcttacaggtgtccgccttggtaccagtacctc ccacacctggaggactatggttatacaccccaagaagcttctaaaatctcgctgcttcag gatgctgctcatgtcctagcaaccccaagagggaaagctcaaaaacgtgcaagtatacca gacagaggatggaagaacatttattcgggagaccaggaaggttgtgtcagccttgaatgt aaatctgtgacagcttttagtgcattactcaccatctcaacagagagtgaaggactgatt cttgttctgtgggatttggagactcaagatgtgaggcatgcgtgtgtgggcagaaacgca gtttttgtggagtgcagcccagaggagcagttaggcctcgtcttttcagagcctggtctc tccttctttctgtttggcatgactcaacaggaattcttgaaccgactaataatccacggc agcgctggcaccgtggacgccctttgccagctgaatgcatgggggcggtgctccattcct gtacatgccttggaggctggtttagagaatcgtcagttggacacggtggattttttttta aagaacaaagagaatcttttcagtgaattctctgcttgctccttcgaagatcagcctgcc agcaaaatgtcagctctttacttggagagtatgcaagagctgaggccggccctggacttg ctttgcaaggcaatccaagaaaatgacttggaaacacagagcaagcatttctcggagcag ttgctgaacctcaccctgtccttccttaacaagcagctccgtgatattttcatccataaa gaagaactggatgacaatctgaacagatgtgttgatattttaaccagctacatcactaag cttagggcgtttatgataaagtttcctcacaagccatccggtgtggggagcctgcgctgc aatctcgaagacgtacccctgatagaacaaagtgcgatgtgggaagagttcagcatggag caaactgttgctgaggccattttaaacaacaagctgccagaggcccagacctttttccag ctgactcacaatcctgcctgcagtctcaaggcactgaaaaggattgggcaggatctggtt tacaagagcctgctgaacaacgacctcaaggaagcctccagactcctgagaaatatgggc ttcaatgtgatggagcagctccaccgagtgtgtttctatgcaagcaactggcgtgtccgg gacttcttggtgaagacgctgcaagacaaagactacttctctgaagcagaaaaagaaatg atagatttcgtgcatcgggtggaaaaagtttattcaacagcacttccggagcatgaaaag aaagcagccccgtgcagctactggagaagggagcaaggcctttctgcctatagtgctgcc ttggacgcgcttctgaactgctgtgaggaccgagtccataaccacgagcacaggatcatg ttgaactgggctcggtggtgggatcgggacacacgagagatggttctccttccaacgcaa tctccaggaggtgagttcaagtcatgtaatccagaggttctttggacatacctgacgtct tggcacgactgggccagtatcagcgcatggattgcagactctcagcctcaggatggtggc tccgactggccacaactgaccgccgaggccgttgagcaaagatccttgtgtagctcgttc atgcacaatgaaatactggactgcctggctaggaatgggacttttgtaccggcagagcta gaaaacgttgagcgccttctccagagattggccctcattggtggggtgatgcagaacccg caccctgttctagagcacgcgcccattgctggcggagatttccacgtctgcgttatccat tattgtttagagcgtggcctggaccatcttctgtacacctatctggattactacagttta tgttcttccaactgccccattctggatgatagatcattgcatgaagctcacccctggttt gaatttctagtgcagtgtcgacgcatcgccagcaaacctggagatgcagccgtgattttc cacgcgagcctcgcgaacgcccaggtcttgattcccagcaaccaggccggcgtgagcagc atgctgctggagggacggacgctccttgccctggcctcgaccatgtacgcccccggaggg attgaccgggttcttcaggacagggatggcggaaagaaggtggatgcccagctcttccgg atggcgctcattccgtaccccaagctgcgagcggccctcttcccccagtgtgcctctcat ggggccctgccctccgacgtctctctctatcacctggctcaggcactcgttccgttcgat ccttccaaattgtttggctggcagtcagcaaacactcttgccattcctgatctccccggc gccctgcctcacttctcgtgcccggccctagtcaacagaggggccatcctggagcgcctg gatttctgccactatttgcgccacgcacgtccgtccttcgcgttggcatcttttgtagtc cagcagctggcgaggagcaaaaccccaaagcagctggttcagcacgcgggcagtgacgcc tacgccctggccctcagctgcttttacgtgccctcggtggtcacggcctgtgcctgcttc ttggaactgctgggcctggagagcctcaagctccgggttgacgcccaagccgcaaatgcg atcctgaacttcatgtcgaggagcgaggagccccagtacgagtccatccggcagtccgtg gtcgacaagctgcgagagctggccgacggggaaaagagggctgcagaagagcttctcgtc tgcctagaggaggcagtttgggacaagaccgagcagcagaaggtccagaagacgtctggt gaggcgcggcggcagtgggcgctggtggtgcagttctgccggctgcacggcatcaagcgg agcccctcctacctgcgggcgtgcgccagagcccacgagtggctgccgctcatcacggtg gcccagatgtatggctacccaccgacggaggtcgttcccatccttcaggagttctccccc ccgctgcagaaccacctgcggctggccttcgggagcgtgctgccccccggtgcccgggag ggagggcagggcagggagctcagccggccgaggcccgagcacaggccgcacgcaaccgac ctcttctgcctcctgctgcacggccaggagccgccccacccctggcaggacctgctggcg gccgccgtgaagcaccacgtcccggccctggccgtgctggccgcgtgcctggagggcgcc ggcaccgtccactgcctctgtgtctggatcgtggcctccttggatcgctccaccgcagcc gaggtgacaaaacacgtcgaaggccctgtcgaaacccatccgtgggaccttctggatttg gccgctctctggcggaggcttctgaggaggcggaagatcagaacgctccttcatggcttc cggtttttcctgaagggctccccgctgctgctgctgctggaggggtacgagtcgtgcatg gagcaccgcaattacacggaggcctctgccaggctcctcgcgttccacggcagcgtcgca aaactccaggccgtgtgcgaagggccgcctcccgtcccgcccgtgccctggctggagtcg caggccgccttccttctcggactgatgccgcagcagtgccgcaccccctacgagctgcgg aggctcctccagctgtttgcagacacgggcactgccctgcctcacggggcagatacgaag aagctaagtgccctcagctacatcttgagggattcccctctctcagttgatcgtgccatc ttaacgaattacactgctgagaacttccagaacgaatgcagcagaattctggagcagctg caggagagaagcgctttttccacggcacgggaggtagcggaacttgcggagttgcccatg gacaacatcgtcatccaggaggtgctccagaacatgcattttttgaaacagattggccac tggccccaaaaacggacaagaattgagttctggaagaagtgtaacgagtgttttgagaag aatggcatcctgaaccgtgccgcctctggcttcttctccgcacaggcagacgcggtgtcg tccgcatccccaaatgatgagggcgcctgctgcatcatcgagaggcagctgctgcttagc ttggccggccactggctggccaggggtgacccgatcccgctcgaggaactggagcaggtg gaacgggaggtctggctctgccgcatcgcccagcagacgctctgccagcggcccaggcag gcccggcagaggctctcgcaccagatttccgttagcggagagcggtccttcgagtccctg gccaaggagttctccttttccaagctggccgcgttaaacgtgcccgaggacctgcagctc gagcgcttgcctgcccaggaggccccgggggccgtgcttccagaggctgaccgggcgtcc ctggaggtcctgatcgggcagctgctggatgagggcagcgtgcacgaggcgagccgtgcc tgccgctacttcaatttccacagccgagacgtctccctggtgctgcactgcagagcactg gcatccggagaggctccccggagccacttccatgcagacgtccgggcgatccttgaagct cgagaggaggaggaaagtgagaggagcggagagggcggtgcgcagaagaggcagctgccg agcacctcagtcctggggagcgggccctgcgcggggggcgagtgtccgggccgggaggtc gcagccagcctgcaggcgctgggagccgagtgtgtgcacgggcggagctactgccggcag gtcctctgcctgtacgagctgtccagggagctgggctgctccttcgacgagatctctgcc cgggatcccgagaagctgctgcggacaatcctctcctctcgccgagcggacaggtgcagg cgggcccagaccttcattgcggcccaggggctggggcccgacacggtggcagagctcgtg gccggggaggtcacgcgggagctgctggcacctgcacaaggacaagggagacagccagcc ctgaatcccgcagaggggagccaggcgttgctgcagctggccaggctgtgcccggaccct gccctggtgggcaagcagctgctggagagaatcgctgctgtaccgccgggggagctggcc tgcaccactgagctcctgatcctggcccacagctgcttcagcttgacgtgccacatggaa gggattatccgggtcctccaggctgcccggatgctcacggaagagcacttggctcccagc gaagagtatggccttgtggtgcggctgctcacgggcatcggtcggtacaacgagatgacg tacatctttgacctgctgcacgagaagcatcactttgaggtgctgatgcggaagaagttg gactcgcagagtggggcgctcaagaccgccctgctggactacgccaagcgccgccgcccg ggagacagcgagaagcacaacatgatcgccctctgcttcagcatgtgccgggagatcggg gagaaccacgaggcagcggcccgcacccagctcaagctcatcgactcctgcccctgggag gattgcctccagaacgtgccccacctaaagacactgctgatgaaagccctgaccctcttc atcgacgctgctgaaagctattccaaggacttctgtgtgcaccagtccttgcactgcaac aggctgacaaaactcatcacgctgcagctccacttcctgaacaccaaccgcgccacacag ctgatcaacctgagccggaagaacctgctggggtgcgtcatggccctgcccaggttctac caggctgccattgtggccgaggcctacgacttcgttcccgactgggctgaagtcctgtat cagcgggtgattgtgaagggagacttcaactacctggaggaatacaagcagtgtggcctg ttgaaggcgagcacgtttgaggagatcgctcagaagtaa

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