Varanus komodoensis (Komodo dragon): 123030757
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Entry
123030757 CDS
T07701
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03440
Homologous recombination
vko03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123030757 (BLM)
03460 Fanconi anemia pathway
123030757 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vko03032
]
123030757 (BLM)
03400 DNA repair and recombination proteins [BR:
vko03400
]
123030757 (BLM)
Enzymes [BR:
vko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123030757 (BLM)
DNA replication proteins [BR:
vko03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
123030757 (BLM)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
123030757 (BLM)
Bloom's syndrome complex (BTR)
123030757 (BLM)
FA (Fanconi anemia) pathway
123030757 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
DEAD
BDHCT
RecQ_Zn_bind
Helicase_C
HRDC
RQC
BDHCT_assoc
ResIII
Motif
Other DBs
NCBI-GeneID:
123030757
NCBI-ProteinID:
XP_044300846
LinkDB
All DBs
Position
Unknown
AA seq
1369 aa
AA seq
DB search
MAAVPQNNLQKQLELHSAKGTLNKLTLLKHKAVGFTFKKKTIIDNSTPVQNSGGTKDVAL
KEKDINSSLIKPSVSFSGTKDKQAKIGSHFERTLKDQKGRKNHPNKQLLDVLDCFVSPVK
ERVPGNEQSGSHFPRADLDSSYKSDINTDDVWNDLDDFEIPGKQKPLSFSNSLSVKTSKA
SRKLSIFTSKSSKNEATGRANQEYNEDCKNNRTLMPGKEQSSELVIWIDSPTASPRDNVQ
EETSAEILSSGNKESAKAQNDTGFVLPVNEKQEDGCCDAVADLEETEDYVDFIQPSPEEE
VPSASFLKSISEPAAEKTPEVLENSFTDSEVSTSGSNKEQKGTDLTLEDSLHSVMASICK
LVDSIPERELRSLSCGKELIQQRDCRKKLLNDIYGRGKDTSTSLSTNSRLYSGQRRVAAG
SWCDHSTPSFVPDTQDLSEAWPSGFSEHFAVDGDISAVENSVLPFSKSGTKERKMEQKGR
FYSEMDGTTSGGQNKLCLPESTLGGEHSLATGEENFANDDFDIDDFDELDDMLTNSTTEQ
CSTTRHQLVEAVQPSKPFLEKNSPIARRNGRLPHPIYPQANCSASAKISFGPLFKNPPSG
DPALECFGGFTFPHSNEMMKIFHKRFGLHHFRTNQLEAINAALLGKDCFILMPTGGGKSL
CYQLPACVSVGVTIVISPLRSLIIDQVQKLTAMDIPATYLTCDKTDAEASRIYMQLSKKD
PIIKLLYVTPEKVCASGRLMSTLENLYERQLLARFVIDEAHCVSQWGHDFRKDYKRLNML
RKKFCSVPMMALTATANPRVRKDILNQLEMLQPQVFSMSFNRHNLKYDVLPKKPKNVALD
CLQWIRKYHPYDSGIIYCLSRYECDSVATNLQKAGLSALAYHAGLPDNIRDLVQQKWINQ
DGCQIICATIAFGMGIDKPDVRFVIHASLPKSIEGYYQESGRAGRDGEMSNCLLFYSYSD
VTRLRRLILMEKDGNRDTRQTHFNNLYSMVHYCENVVECRRLQLLSYFGETGFNSNFCKE
YPEVSCDNCSKRQEYKLRNVTEDVKDIVRFVQEHCGGKATVRRHAGRYTLNMMIDIFLGT
KSAKIQSGLFGRGAAYSRHNAERLFRKLVLDKILDEDLCITANDQAVAYVQLGERAYAVL
SGTLQVEFCETESASSIRKQRALVAKMSQREEMIKKCLSELMDVCKNLGKMLGIHYFNIF
STATLKRIAETLSSDPAALLQIDGVTEDKLEKYGADIIEVMQKYSEWSFSGEGKPLLTTD
TDVSRNCSVGEAVEDMCTTSGYFQNGTNKGRKRRKAQPFRESKKKKTGSGGRQSHSKRGY
KNDRKASSNSKGSTSDIPLVKTGIGRRPGIMAPPKPQNRHYLKPTYSHL
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgttccacaaaacaaccttcagaagcagctcgaacttcattcagccaaagga
accttaaataagctgactcttctcaaacataaggctgtgggttttactttcaaaaagaaa
accattattgataacagtacaccagtgcaaaattcaggagggacaaaagatgtggcctta
aaggaaaaggatattaactcatccttgataaaaccaagcgtgtctttctctggcactaag
gataagcaggccaaaattggtagccactttgaaagaactttgaaagatcaaaaaggaaga
aaaaaccatccaaataaacaacttttggacgttctggattgttttgtgtctcctgtgaaa
gaaagagtaccgggcaatgaacagagtggctcccacttccccagagccgatcttgacagc
tcatacaagtcagatattaatactgatgacgtttggaatgacttggatgactttgaaata
cctgggaagcaaaagccgttgtcattttccaacagtctgtctgttaaaactagcaaggct
tcaaggaagctgagtatatttaccagtaagtcatcaaagaatgaagccacaggtagagct
aaccaagaatataatgaagactgtaagaacaacagaactctgatgccaggcaaggaacag
agcagtgagttggtcatctggattgattctccaacagctagcccccgagataatgttcag
gaggagacttctgcagaaattctctccagtggcaacaaagagtctgcaaaagcacagaat
gatactggctttgtgttaccggtgaatgagaagcaagaggatgggtgctgtgatgcggtg
gcagacttggaggagacggaggactatgtagacttcatacaaccttctccagaggaagag
gtgccttctgcatcatttttaaaaagcattagtgaacctgctgcagagaaaactcctgaa
gttctggaaaacagctttacagattctgaagtgtccaccagtggaagcaacaaagagcag
aaagggacggacttaactttggaagactccctccacagtgtgatggcgagcatctgtaaa
ctggtggattccatcccagagagggagctgaggtcattgtcatgtgggaaggagctgatt
caacagcgagattgcagaaagaaactgctaaatgacatttatggaagaggaaaggatact
agtacatctctgagtacaaacagcaggctttattctggacaacggcgagttgctgctgga
tcctggtgcgaccattcaactccctcctttgtaccagacacgcaagacttaagtgaagct
tggccatctggtttttcagagcattttgctgtggacggtgatatctctgcagtggaaaat
tcagtgttgcctttttccaaaagtggcaccaaagaaagaaagatggaacagaaaggtcgg
ttttattcagagatggatggaacaacttcaggggggcaaaacaaactctgcctacctgaa
agcactctgggaggtgagcactccttggcgacgggagaggagaacttcgctaatgatgat
tttgacattgatgactttgatgaactggatgatatgcttactaactcaacaactgaacag
tgttccacaactcgccaccagcttgtggaggcagtgcaaccttccaaaccgttcctggaa
aagaactcccctattgccagaagaaacggccgccttcctcatcctatttatccccaggca
aactgctctgcatctgccaagatttcctttggcccactgttcaaaaatccaccttctgga
gatccagcattagaatgcttcggaggcttcacgtttcctcattcgaacgaaatgatgaag
atatttcacaaaagatttggtctgcatcactttcggaccaatcagcttgaggccatcaat
gccgctctgctagggaaagactgcttcatcctgatgcccacaggcggtggtaagagcttg
tgctaccagctgcccgcctgtgtttccgtgggagtcaccattgtcatctctcccttgagg
tcgctgatcatagatcaagttcagaagctcactgcaatggatataccagctacttacctg
acgtgtgataagactgatgctgaagcatccagaatctatatgcagttatcaaagaaagat
cccatcataaagctcctctatgtcactccagagaaggtctgtgcgagtggccggctgatg
tccacactggaaaacctgtatgagcggcagctgttggcacgctttgtgattgacgaggcg
cactgtgtcagccagtggggccatgactttcgtaaagactacaagcgtctgaatatgctt
cgtaagaaattctgctcggttcctatgatggctcttactgccactgcaaacccccgggtg
cgaaaggacatcctaaatcaactcgagatgcttcagccgcaggtgttcagtatgagcttt
aacaggcacaacctgaaatacgatgttttgccaaaaaagcccaaaaatgttgctttggac
tgcttgcagtggatcagaaaataccacccatatgactctggaataatttactgtctctca
cggtacgaatgtgactcggttgccacaaatttgcagaaagctggtctttctgcccttgca
tatcatgctggtctccctgataacatccgagatcttgtgcagcagaagtggattaatcag
gatggatgtcagattatatgtgcaaccattgcgtttggaatggggattgataagccggat
gtgcgctttgtgatccatgcctctctccccaaatccattgaaggttactatcaggagtca
ggcagggctgggcgtgatggagaaatgtccaactgcctcctcttctacagctacagtgat
gtcaccaggctgaggcggctcattctgatggaaaaagatggcaaccgcgacacgcggcag
acacatttcaacaacctctacagcatggtgcattactgtgaaaatgtagtggagtgccgg
agattgcagctgctgtcctattttggagaaactggctttaattctaacttttgtaaggaa
taccctgaagtgagttgtgataactgctccaaacggcaggaatataaattgaggaatgtg
acagaagatgtgaaagacattgtcaggtttgttcaggagcattgtggtggaaaggcaact
gtgagaagacatgctggaagatacacactgaatatgatgatcgacattttcttgggcacg
aaaagcgccaagattcagtctggcctgtttggcaggggggcagcatactcacgccacaat
gccgagcgactcttcaggaagctggtattggacaagattctggatgaagacctgtgcatc
acggctaatgaccaagcagtagcgtatgtgcagttaggagaaagagcttacgctgtgcta
agtggcactctccaggtagagttctgtgaaactgaaagtgccagcagcattcgcaagcaa
agggctttggtggccaagatgtcccagcgggaagaaatgatcaagaaatgtctctcggaa
ctcatggatgtctgcaaaaatcttgggaaaatgcttggcattcattacttcaatattttt
agcactgccactcttaaaagaattgcagagacattgtcttcggacccagcagctttgctt
cagattgatggtgttacagaggacaagttagagaaatatggagcagatataattgaagtg
atgcagaagtactctgaatggtcattctcaggggaaggcaaaccacttctaaccacagac
actgatgtcagcagaaactgcagtgttggcgaggcagtggaggacatgtgcacaacatct
ggctatttccaaaacggaacaaacaagggaaggaagaggagaaaggcacagccgttcaga
gaatcgaagaagaagaaaaccgggtctgggggtcggcagtcacattccaagcggggttac
aaaaatgacagaaaggcatcatctaattccaaaggttctacatctgacattcctctagtc
aagacaggaattggccgaaggcctggaattatggcaccaccaaaaccccaaaacaggcac
taccttaaacctacttactcacatttgtaa
DBGET
integrated database retrieval system
