Varanus komodoensis (Komodo dragon): 123031243
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Entry
123031243 CDS
T07701
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vko04131
]
123031243 (VPS13A)
Membrane trafficking [BR:
vko04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
123031243 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
T2SSM
Motif
Other DBs
NCBI-GeneID:
123031243
NCBI-ProteinID:
XP_044301885
Ensembl:
ENSVKKG00000010292
LinkDB
All DBs
Position
Unknown
AA seq
3190 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDSSQLKLGIWGGAVALKNLEIKENALYQFDVPFKVKAG
HIGQLNLQIPWKNLYTQPVEAVLDEVYLLIVPTASIKYDAEKEEKHQLEAKQRELQRIED
AKQKIADIDKQQEKQDTFLEKLITQVIRNLQLKISNIHIRYEDDITNKDIPLSFGVSLQN
LSLQTSDKDWNPSIQDATAKLFYKLVRLDNFFAYWNVNSEMFYHSGFKEALNNLKHGVAS
ANLIPEGYSFVFRPISAKAKLRMNPRSDVDFSAPKIDLNVNLQDITIELNKPQYFSIMEL
LESIDMMTRNLPYRKYRPDVPVHNNAKRWWKYVIYGILEVNVQPKLQMWSWEHIHYHRNQ
IKNYKDLYKKKITTKKPADECLNKLEELEKTLDIFSITLARQQAEFEATKAGLKIFRPGT
KQDDEDSGGWFSWMWGWVGSKTDQAVQEPKGIEQLMTPEEKDKLYAAIGYGETAIDPTLP
KTYEAIKLYIKLVSMTVQIRENKGKPELIKLALIDLCTTVTQRPGAEAIRFESSVSAFEV
KGMAQRKTIPCLLSSNTVHSQHNTSLFTIMFETNPLNESANQKLRIESQPLEIIYDAMTV
NSLVDFFRPPTDVHLEQLTSATLTKLEEFREKTATGLVYIIETQKILDLKINLMASYIII
PQNGFYEPMANKLLLDLGHLTMVSKSRSTLSDIVVGESSLEAIMSRAYDKFDIQLSSIQL
LYSSHDENWEEARNLQSSSQHILHPLDVKMELSRAMVVTDARMPKYKMFGELPLLSFNIS
DEKLKSILELIDSIPKPESPADTSVVPQPSKLQVSSLLTTPQMSTAVLPLLEYNSIAGSS
ESEEEFYDAPSSPVEDLPFFEAPLGSLDRAASIKRKPARRESLKNMIDFQLRFEISEVFV
QVCCLDEGVEKPMLRLEILKLGTELNLRTYDMSATAFLKEICLICPEYMDDKGKPVYIIS
TLDNLMDDLLAIEYRKADINAPDLKTTYKNVLQLIKVTFSSIDIHLHTEALLNTMNFLNN
LLPTQESTAVEITQEKEEKREVLKKFTSKKSKYEDVCDLHVCADMSCLRVFLRDQKRRIS
EIRVEGLDSQVMMKKETTEISAKLKNIIIVDCDEAALYKKALYITGKEVFSFKMVTYMYA
TDGISYTNMNAVDSKIYLTVGCIQIVFVNKFVSAILAFVNNFQTAKEAITEATVQAAEKA
ASGVKELAQQSSRMALDVNIKAPVVIIPQSAISTDVLVADFGLITIKNEFLLVKTKLRSN
IPPILDSIHVTLSELKLYRSSSVSGLLQNEIQLLQPLNLEVTVERNLAALWYHEIPDIKI
SGRLKPMNLILSQEDITTILRTLNENLGDSSDPPPPEPQKKDVLSIHSGAASVSQHSGAG
VTVVTAAVVEMHPSVKVKTTLKLDFQFDSLTLVLYSPNSNQPLVQDERDDHLKLAEFKLL
LISTAVKMLSDGSMNASVRLTNCTLDDKRQTVQNATPRMIEMKHGSEKKVMVDISYKRGR
DGSTVLDTVVQEIYLCASIEFLLTVADVFLKATAESAAAERNFKQSLSVKEQVPVQSEST
MEINVVVKNPEIVFVADLTRSDAPALVATAQFEVSMKNGPEMNKMTAAVKAIKVKACPFF
PDMRKGNITTVLQPCDLVFDMMQSGEDPQKADLSIKSITIKVSPIIINTVLTITSALFPT
QETTEKDISPVPPDLWDKKNIKELNMWFLEESNENKDSASVTELIPTGETLQMRIETVII
TLEAGVGHKTVPMLLAKSSFSGEVKNWSSLINLSSRLELEVHYYNEMFGVWEPLLEPLEV
ENTDEFRPWVLELKMKKKAKKALVETVTEEEHYKVPEYKTVITIYSQDQLNITLSKCGMQ
MLNNMGTAFAEAATETSEIFKKDQAPFVLKNSLGVSTIVLPSDSFSVLNVEPEENAFHLE
DGQSLSMEYVRTKSEQDQFTAMTTLSSKVFYIWLTPQNHSTTEKIPLTKVGRSLYRVRHN
DSGVVRSIVCQIDTIEGSRMITVHSPIQIKNHFSIPLSIFEDGKCLGKALPGDEFNIPLT
SYRSLLFFRPITDDISEEYASSEGVSFDEMVKNFGKLLQKKCQLKNSATHSLIINIVPMQ
DTLISSVCTDDQWDLPYIVHLWPSVLLRNLLPYQISYSLEGYDGTYSTLDDGCSVQIHNA
VLDQSKLELQLLNYLNKNWTSEYHIQTNQQEISFITFSYISDVDKTDLDIAVHVTYATGQ
MIIAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYKMPLLFSFQPKHFYHDNKVQLMVTDS
ELSDHFSLDTVGSHGSVKCKGHKKEYQVGVTIHNSSFNITRIVTFTPYFMITNRSTHTLE
VAEEGNEKWIPVIFQQCIPFWPQNNESKLQVRVENSDIPPKIIQLDKQENSLLLHLDNRL
GGIIVDVTLAEHSTSVTFSNYHDGAAPFLIINHTKAETIEYGQSSLCEMEDALAPNKAVL
YTWVDPVGSRKLKWTCGKSSGEVTQKDDLMTPVELGKKTIYLVSFFEGLQRIILFTEDEK
VFKVTYESEKAELAEQEIIVSVQDVGISLVNNYLKQEVAYIGITSSDVIWETKPKKKSRW
RPLSVKQTEKLEKEFNEYCDQSPTENKIVELEDNVPVCLTPTGNNMKIMQPNEIPVRRSF
LPALKVQYSTSEHQSSFRVQIYRIQVQNQIPGAIFPFVFYPIKPPKSISLDSEPKPFTDV
SIVMRTAGHSQISRIKYFKVLIQEMDLRLDLGFLYALVDFFVPANEVPRDQEIELFRKDV
EAVQEELKNVSSTDTSQISLYEYFHISPIKLHLSFSLSAGGEDSNKEERSKELIPVQSVN
LLLKSIGATLTDVQDVVLKLAFFELNYHFCTTQQLQWAVIMHYSKQAIKQMYVLILGLDV
LGNPFGFIRDLSEGVEAFFYEPYQGAIQGPEEFIEGMALGLKALVGGAVGGLAGAASRIT
GAMAKGVAAITMDEDYQQKRREAMNRQPAGLKEGITRGGKGLVSGFVSGITGIVTKPIRG
AQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRVTNTSEDVMSLRPPRFFSE
DGVIRPYRLRDGAGSQMLQNIENGRFAKLKYFTHAMVNNTDLLMVTKSGILFVTRGTFGQ
LTCEWQYTYDEFTKEPFIVDGRRLRIEAKERVKSVFHAKEFGKIINFKTPDDAKWILSKL
EEVRENQPKL
NT seq
9573 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggttgtggacgttctgaaccggttcctgggcgattatgtggtg
aatctggacagttcccagctcaagcttggcatctggggaggagctgtagcacttaagaat
cttgaaataaaagaaaatgcactgtatcagtttgacgtcccatttaaagttaaagcaggg
catattggtcaactgaatttgcaaattccatggaaaaatctttatactcaaccagttgaa
gctgtgttagatgaagtttacttgcttatagtgcctacagccagtattaaatatgatgct
gaaaaagaagaaaaacatcagttggaagcaaagcagagggagctgcaaagaatagaagat
gcaaaacagaagattgcagatatagataagcaacaggagaagcaagacactttcctagaa
aagctaattactcaggtcatcagaaatcttcagctgaaaatttctaacatccatattcga
tatgaggatgatatcacaaataaagatattccattgtcatttggtgtctcacttcagaat
ctaagtttacagacttcagataaagactggaatccatctatacaagatgcaactgctaaa
ttgttctataagctagttcgattggacaacttttttgcatactggaatgtgaattctgaa
atgttttatcacagtggttttaaagaggctttgaataacttaaaacatggagttgcaagt
gctaacttgattcctgaaggctacagttttgtattccgtccaatttcagctaaagccaag
cttcgtatgaatccacgttctgatgttgacttttctgcaccaaagatagatctaaatgta
aatcttcaagatataaccatagaactaaataaaccacagtatttcagtattatggaactt
cttgaatcaatagatatgatgacccgaaatttgccatataggaaatatagaccagatgtt
cctgttcacaacaatgccaagagatggtggaaatatgttatatatggcattcttgaagta
aatgttcaaccaaaacttcagatgtggtcttgggagcatatccattatcataggaatcaa
ataaagaactataaagatctatataaaaaaaagataacaacaaagaagccagcagacgaa
tgtttgaataagttggaggaactagaaaagaccctggatattttcagcatcactctggca
agacaacaggcagaatttgaggcaacaaaggctggtttaaagattttcagaccgggaact
aagcaagatgatgaagattctggtggctggtttagttggatgtggggatgggttggaagt
aaaacggaccaagctgtacaagagccaaaaggcattgaacagttgatgactccagaagaa
aaggataaactttatgcagcaataggttacggtgaaacagccattgatccaacattgcct
aaaacttatgaagccataaagctttacataaaactggtaagcatgactgtccagatcagg
gagaacaaagggaagcctgaactgataaaacttgcattaattgatctgtgcaccacagtg
acacaacggcctggtgctgaagcaataagatttgaatcaagtgtaagtgcatttgaagta
aagggcatggctcaaagaaaaaccattccctgtttgctgtcttctaacacagttcactca
cagcacaatacatcactcttcaccataatgtttgagacaaatcccttaaatgagagtgcc
aatcagaagctaagaatagaatcacagccattagaaataatatatgatgcaatgacagtg
aatagcttagtggacttcttccgacctccaactgatgttcatttggaacaattaacctca
gcaactttaacaaagttggaagaatttcgggaaaaaactgctacaggattagtgtatatt
atagaaacacagaagattttagatttaaaaataaatcttatggcttcctatatcattatt
ccacaaaatggattctatgaaccaatggcaaataaactacttctagatcttggtcactta
acgatggtgagtaaaagtcggtctactttatcagatattgtagttggtgaaagctctctt
gaagctattatgtcaagagcatacgataagtttgacattcaactcagcagcatacagcta
ctttatagcagtcatgatgaaaactgggaggaggctcgtaatttgcaatcatcatctcag
catatactgcaccccctggatgtgaaaatggaattgagcagagcaatggttgtaacagat
gcaagaatgcccaaatacaaaatgtttggtgaactgccattattgtctttcaacatctca
gatgagaaattgaaatctattctggagcttattgatagtattcctaaaccagaaagtcct
gctgatactagtgttgttcctcaaccttccaagcttcaagtatcttcactgttaacaaca
ccacaaatgtcaaccgctgtgcttccacttctggagtataattcaatagctggatcaagt
gaatctgaagaagaattttatgatgccccaagtagtcctgtggaagatttaccatttttt
gaggcacctttgggatccttggatagggcagccagcattaaaagaaagccagcaagacga
gaatctttgaagaatatgattgatttccagttaagattcgaaatatctgaggttttcgtt
caggtgtgttgtcttgatgaaggggttgaaaagccaatgcttcgcttagagattttaaaa
ttaggcactgaacttaatctaaggacatatgatatgtctgctactgctttcctaaaagag
atttgtttaatatgcccagaatatatggatgataaaggcaaaccagtttatatcatttca
acactggataatttaatggatgatcttctggcaattgaatacagaaaggcagatattaat
gccccagatctgaaaactacttataagaatgtccttcagctgataaaggtgactttttct
tctatagatatccacttacacacagaagcacttctgaatactatgaatttcctaaataac
cttctcccaacgcaagagtcaactgcagtagagatcacccaggaaaaagaggagaagagg
gaagttctcaagaaatttacatcaaagaagtcaaagtatgaagatgtttgtgatctccat
gtttgtgcagacatgtcctgtttacgcgtttttttgagagaccaaaaacgcaggatatct
gaaattcgtgttgaaggtcttgatagccaagtgatgatgaagaaagaaacaactgaaata
tcagctaagttaaagaatataattattgtggattgtgatgaggcggcactatataaaaag
gccctctatattactggaaaagaagtctttagtttcaaaatggtgacatacatgtacgct
acagatggtatttcttacacaaatatgaatgccgttgacagcaagatttatttaactgtt
ggatgcattcaaattgtttttgtcaacaaatttgtttctgctattttggcatttgtaaac
aattttcaaactgcaaaggaagcaattactgaagctacagttcaggctgctgagaaagca
gcttctggtgtgaaggaattggctcagcaaagttcccgaatggcactggatgttaatatt
aaagcacctgttgtcataatccctcagtcagcaatatctactgatgttctggttgctgat
tttggtttgatcaccataaagaatgaatttttgcttgttaaaactaagcttcgttctaac
atcccacctattcttgatagcattcatgtcacactgagtgaactaaagctgtacaggtca
agcagtgtcagtggcttactacaaaatgaaatacagctattgcagccattaaatcttgaa
gttactgttgaacgcaatttggctgctctctggtatcatgagattcctgacataaaaata
tctggacgtctcaagccaatgaatctgattctcagtcaggaagacataactactattttg
aggaccctgaatgaaaatttaggagatagttctgaccctccacctcctgaaccacaaaaa
aaagatgttctaagcatccatagtggagctgcaagtgtctcccagcattctggagctgga
gtaacagtggtgactgctgctgtggtggaaatgcatccctctgttaaggttaaaacaaca
ctaaaattggacttccagtttgattccctgactctagtgttgtacagtccaaattccaac
cagcctctagttcaggatgaacgagatgatcatctgaagcttgcagaatttaaattgttg
ttaatatcaactgctgtcaaaatgttgtcagatggatcaatgaatgcttcggtccggtta
acaaactgcactttagatgataaacgacagacagtccagaatgctacaccaagaatgata
gaaatgaagcatggatctgaaaagaaagtcatggtggatataagttataagcgagggaga
gatggctccactgttcttgacacagttgttcaggagatatatctctgtgctagcatagag
tttctgcttactgttgcagatgtatttctaaaagctactgcagaaagtgctgctgcagag
agaaacttcaagcagtctttatctgtaaaagaacaagttcctgtacagtcggaatccaca
atggaaataaacgtcgtcgttaaaaatcctgagattgtgtttgtggccgatttaacaaga
agtgatgctcctgcactagtggctacagcacagtttgaagtatccatgaagaatggccct
gaaatgaataaaatgacagctgctgtgaaagctataaaagtgaaagcctgcccatttttt
ccagatatgagaaaaggcaatattacaacggtactacagccctgtgaccttgtctttgat
atgatgcagtcaggtgaagatcctcagaaagcagatctgtcaatcaaatctataacaatt
aaggtgtcacctattatcatcaatacagtcttaaccattacatcagcacttttcccaact
caagagaccacagaaaaagacattagccctgtacctccagatctttgggataagaagaat
attaaagagctaaatatgtggtttcttgaagagtcaaatgaaaataaggattctgcttct
gtaactgagttgattcctacaggagaaacactgcaaatgagaattgaaacggttattata
actctcgaagctggggttggtcacaaaacagtgccaatgcttttagcaaagtcttcattt
tctggagaagttaaaaattggagcagtctgatcaatctctcttctcgtcttgaactagag
gtacattattacaatgagatgtttggtgtttgggagccattacttgaaccgctggaagtt
gaaaacactgatgaattcagaccatgggttctagaattgaagatgaagaagaaggccaaa
aaagctttagttgaaacagttactgaagaagaacattacaaggtgcccgagtacaaaaca
gtgataacgatttactctcaagatcagctgaacattacattgtccaagtgtgggatgcaa
atgttgaataacatgggcacggcatttgcagaagcagctacagaaacttcagaaatattc
aaaaaagatcaagctccctttgtactaaagaattcattaggagtttccaccattgtcttg
cctagtgattccttcagtgtccttaatgttgagccagaggaaaatgcatttcatctggaa
gatgggcaaagtctgagtatggagtatgtcagaactaaaagtgaacaagaccagttcaca
gcaatgactactctaagcagcaaagtattctacatttggctcactcctcagaatcactcc
actactgagaagatcccattgacaaaagtgggcagaagtctttacagagtaagacacaat
gattcgggtgttgtaagatctattgtttgtcaaattgataccattgaagggagcaggatg
ataacagtacactctcctattcagataaagaatcatttttcaattccattgagtatattt
gaagatggaaaatgtttaggaaaagctttgccaggggatgaatttaacataccattgaca
tcttacagatcactactttttttccgaccaataactgatgacatttctgaagaatatgca
tcaagtgaaggagttagctttgatgaaatggtgaagaactttggcaaattgttgcagaaa
aaatgtcaacttaaaaattcagctacccattctcttatcatcaatattgttccaatgcaa
gatactttgatatcttcagtgtgtacagatgatcaatgggatttaccatatatcgttcat
ttatggccttctgttcttctccgcaatcttcttccttatcagatcagctattccttagag
ggatatgatggaacatacagtactttagatgatggatgttcagttcagattcataatgca
gtactggaccagagcaagctggaattacagttacttaattacctcaacaaaaattggacc
tctgagtatcacattcaaacaaatcaacaagaaattagtttcatcacattttcctatatt
agtgatgtagataagacagatttggatattgctgtgcacgtaacctatgctacaggacaa
atgattatagcaattcacagtccgtactggatggtgaataagactggtcgaatgttgcaa
tacaaagctgatggcattcaccgcaaacatccacctgactacaagatgccacttctcttt
tctttccaacctaagcatttttaccatgataacaaggttcagcttatggtcacagacagt
gaactctctgatcatttttctctggatacagttggcagtcatggttccgttaaatgtaag
ggtcacaaaaaggaataccaagttggtgtcacgatacataacagcagttttaacattact
agaatagtgacattcacaccttattttatgatcacaaacagaagtacacatactttagaa
gtagctgaagaaggcaatgaaaagtggataccagtaattttccaacagtgtattcccttt
tggcctcaaaataatgaaagcaaattacaggttagagtagaaaattccgatattccaccc
aaaattatacagcttgacaagcaagaaaatagtctgctgctacacttagacaataggctt
ggaggcattatagtggatgttacacttgctgagcattctacatcagttacgttctctaat
taccatgatggagcagctcccttcctgataattaaccatactaaagctgaaacaattgaa
tatggacaaagttctctctgtgaaatggaagatgctttagcaccaaataaagcagtactt
tacacatgggtcgatccagtaggttctagaaaattgaaatggacttgtggaaaaagcagt
ggagaagtaactcagaaggatgatttgatgacacctgtcgagttgggaaagaagaccatt
tatttggtttcattttttgaaggcttgcagcgaataattctgttcactgaagatgaaaag
gtcttcaaagtgacatatgaaagtgaaaaagctgaattagcagaacaagaaatcattgta
tcagtacaagatgttggaatttctttagtaaataattatttaaagcaggaagtggcttac
attgggatcacaagttctgatgtgatttgggaaacaaagccgaagaaaaagtcaagatgg
aggccactgagtgtgaagcaaactgagaagctggaaaaagaatttaatgaatactgcgat
cagtcacccactgaaaataaaatagtggagctggaagataatgttccggtctgcctgact
cccactggtaataacatgaaaataatgcaaccaaatgaaatcccagtaagaagaagcttt
ttgccagctttaaaagtacagtacagtacatccgaacatcaatcatccttcagagtccaa
atttatagaatacaggtacaaaaccagatccctggagccatatttccctttgtgttctat
cctattaaacctccaaagtccatctccttggattcagaacccaaaccatttactgatgtc
agtattgtcatgagaactgcagggcattctcaaatatcacgtataaagtattttaaagtt
ctaattcaagagatggatctccgattagatcttggttttctttatgcattggttgatttc
tttgtacctgctaatgaagtgcctagagaccaagagatagaacttttcagaaaagatgtc
gaagctgtacaggaagagctgaagaatgtatcatcaacagatacttcacaaatcagttta
tatgagtatttccatatttctccaataaagttacacttaagtttttcactcagtgctggt
ggagaagatagcaacaaggaagagagatctaaggaactgattccagttcagtctgtcaac
ctcttattaaagagtattggggcaacgctcacagatgtgcaggatgttgtacttaagttg
gcattctttgagcttaactaccacttctgtaccacgcagcaactacagtgggcagttatt
atgcattattcaaagcaggctattaagcaaatgtatgttcttattcttggcctggatgtt
ttgggcaatccatttggattcataagggatttgtctgaaggagttgaagcattcttttat
gaaccatatcagggggctatccaaggcccagaagagttcatagagggaatggcactggga
cttaaagccctagtgggtggtgctgttggtggattggctggtgctgcatcaagaataact
ggtgctatggctaaaggggtagcagcaataactatggatgaagactatcagcagaagcga
cgggaagccatgaataggcaacctgcaggcctcaaagagggtatcactcgtggaggaaaa
ggcttagtatctggttttgtcagtggaataacaggaatagttacaaagccgataagaggt
gcccagaaggaaggagcagcaggttttttcaaaggtgttggaaagggattagtgggagca
gtggcaagacccactggaggaataatagacatggccagcagcacttttcagggaattaaa
agggtcacaaatacttctgaagatgtcatgagcctacgtcctccccgcttctttagtgag
gacggagttatacgaccatacagattaagagatggtgctggaagtcaaatgttacagaat
attgaaaatggaagatttgcaaaactgaaatactttacacatgcaatggtcaataataca
gatttgctaatggtaacaaaaagtggcatactgtttgtgacaagaggtacatttggacag
ttaacgtgtgaatggcaatacacatatgatgaattcaccaaggagccattcattgttgat
ggacggagattacggattgaagcaaaggagcgagtaaaatctgtatttcatgccaaagaa
tttggaaaaataattaattttaaaactccagatgatgccaagtggatcctctctaaactg
gaagaagtgagggagaaccagccaaaattatga
DBGET
integrated database retrieval system
