Varanus komodoensis (Komodo dragon): 123031339
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Entry
123031339 CDS
T07701
Symbol
VCAN
Name
(RefSeq) versican core protein
KO
K06793
versican core protein
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04514
Cell adhesion molecules
vko04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
123031339 (VCAN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123031339 (VCAN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
vko00535
]
123031339 (VCAN)
00536 Glycosaminoglycan binding proteins [BR:
vko00536
]
123031339 (VCAN)
04091 Lectins [BR:
vko04091
]
123031339 (VCAN)
Proteoglycans [BR:
vko00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
123031339 (VCAN)
Glycosaminoglycan binding proteins [BR:
vko00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
123031339 (VCAN)
Lectins [BR:
vko04091
]
C-Type lectins
Lecticans
123031339 (VCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
Sushi
hEGF
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
123031339
NCBI-ProteinID:
XP_044302128
Ensembl:
ENSVKKG00000010128
UniProt:
A0A8D2L2H6
LinkDB
All DBs
Position
Unknown
AA seq
2961 aa
AA seq
DB search
MFKKILWMCWTLAIAHALRKVKVEKSPPVKGLLAGRAVLPCFFSTLPTLPPSYYNTAEFL
RIKWSKIEQDKGGKDLRETTVLVAQNGNIKIGQGYRGRVSVPTHPEDIGDASLTMVKLRA
SDAGVYRCDVMYGIEDTQDIVSLAVDGVVFHYRAASSRYTLNFKQAQKVCLENGAVIANA
DQLKAAYEDGFEQCDAGWLADQTVRYPIRQPRVGCYGDMMGKEGVRSYGRRLPNETYDAY
CYVGSLKGDVFHITAPNKLTFEEAKSQCEAQDAVLASVGDLHAAWRNGFDQCDYGWLADG
SVRYPVSVARIQCGGGLLGVRTLYRYENQTGFPYPDSRFDAYCFQHKNVSDATSVELNIS
VENGSSNLLTELKIIPPKDAFHPHISSVAPGVTKAKQKEKVPEIITLPTILPQTVAEFSD
SSKLRESDTVLNDLVIVTPTESVFDHSEEISESQTEQIEVAPIRTSVDALLKSNFSQPVE
TGTSVTPTKEGTHLAIKPTKQSMEVKSDTKLTTVLIPKEELTDDNGAVMPDEWLETSSTD
PELKVVKEPKLFLDKNATSIIQTEPSSRDQDTEKPATVSDSAAGATKFSLTPEHDQTAEG
SAYEEKYAVTEALGPIMKIATYETSTKFPGMDVVTAQKLTTSMVLPTKPSPESEDGVPTI
KFKETFSTKAVTHVPEESTDMGKAKAVTTHSPEGSGTTEDILGTESVLFSAPATSKPTVI
SGIATTTFAAVDKILPTSASKSLITKTQPPLMEWEPDEDAGIDVLIIDESISPIKTTTDD
DFAGKKAEPEIDTEYFTSSSVTAVAQPTGSPTEVLESQEKPPTSDEVGFENKADIKVIVV
SIAGNDTDTLHGVWNILGYPVHSDEVDESPTDSEPTHDEPCTATPEEESSEFIIVDPFYP
FVEEEEEDCENTTDVTTPPALQFINGKHQVTTAPRDTKAEEARSDQIESLAHSKNVTFSH
INDTNLISENEVSTPKQPNESTEVIGETVVTQKLMSELTMTELISSGDSDVSVRDKIFEI
TSLHSESSDTTEKSTQSGTDFNEILSKHHHIFSLISSEHSGDFTTKTDLNTHAFSHTTET
TPKEDSKTFSSTSFASSWIHPYITVPPGREENTVSENDVSILQDGYKSTIKSDILPSAES
LLERTRTPISLYVPEGSGNTQENAESTSESESTIKTAGTEKIHVQEIFSDADKQIPTKTT
PSFSQPPNLLYKETSSTLKQSYIEATTTQSFTELILSSMKNTSEAEENIEEVESTISSAN
EYSTTVQTENLLFSNDSASFSNDIGVVNQESIITSGTDVPSLKTEEATEKRLPIDEESGD
GSTDAWMYPGRDILWGGPTSKVVSTDSSFIDPGSGEVDVTQATTFTSFSLQSGPQSTEKQ
VQEIDTLSRDVSLLKYSVTVEPTMPVLDTESHGEGMETRTESEVPKNVTDHQGALQELGT
VVLSVSEKSIGESAEEVIISSTAKEENMDLFETSGVTASVESSTHFAPDIIVTDGIKSIK
PVTELSESRSTVIISPSVPTVLKDSMVSQEEGSPFMINDTINSAQPESTTHLSPTTFAEK
LELADVGSGGESKDGKSGIALVPHGPSERVINTELPFIEDGSGDKGSFTDPLIQTTVPSQ
LLVEMPGTQTVKDENQHSSMTSRYQVYTDAPAKLDIGSTSTITLTNTGIRRKVPNMDQET
LAELETRGLPTILPLEHEVNSDNEGAAEISGDMVQTPDVVRQYFVKGTESITKQAEILSG
STFSPYVEEITFQVTSDTESYSKTLTTESETFQNKAVSTSSTIAEKEEWLVENVHPTEDS
HKPLSVSTPYEPTSMPIINAPFFSEQGSGDVLFTDQSAIVHASSTTVKESTSTFNYDILH
PKSSEATFAVEGIKEFDRHTSDSSDDSDNEIQYPHTVADAFSATSHKTVTTASTLDVWVT
DTEASTIKQLVSEHYSKQENSSQEEEKITSSTAAVTDRISQGQASHVMKHEDTTPVSELF
TGKPTPRTVKAPATTSEPNMLTVKYHEGSGEGSGWLDIAGKHSESPTQLPEREQSFASQS
SGEKNSEVMKPDLAVNGTQMVPVSSPIFREEKQTRPTSESDFSETFADESSTNSLKDYEE
LIPIIDEKRNYSGDKPSLIDVIGEGHGIISDETTIIDVDNLKSDIEDISGQMTVSPESYS
EYGIYTLTMEIQHTTPDNTLTDDKSDSFGDGSSGTSQVIYSEPTISEKSVTADDTGSGDA
ILPTADTTISQEVPKTATFLPTTPLFISPMISFPISSKADEKDKELEFETKHTESTKTIE
DNFELQTLSDNQTMIEERKLDSTTSTLVKEQVEMHEKEYVAPSPTTPQLPVKIDQASTTH
KYGESTVSQSSMMPEKTSHDTFEGMRTLATALIEPDPKALLLTTEPPKSPVTVYLLKKVS
EYPEEIMPSTSSSTDSDKSSFSEIQTFKEASADMAATYKPAMNQSSEISLSSSSELEVES
KITESTTVSSWQITEIKEGPTEMTVAEETIISRDPLSREAKPTITTIEVSSEEGTSHEKV
KELDHSDENSAEGALPWIHTTAPSIPHESKTGGVFGVDGKADAWPISSPPSMDTTVELQT
EQEPVTISSNAATKSPGPESIPDYNEQTRNTEDMSTNELVTLPFLLPDVTNGSDFLVATG
GGSVEGTAVQIPGQDPCKSNPCLHGGTCYPRDSFYICTCMPGFSGDQCEVDVDECQSSPC
RNGATCIDGVNTFTCLCLPSYVGALCEKDTETCDYGWHKFQGQCYKYFAHRRTWDAAERE
CRLQGAHLTSILSHEEQLFVNRIGHDYQWIGLNDKMYESDFRWTDGSVLQYENWRPNQPD
SFFSSGEDCVVIIWHENGQWNDVPCNYHLTYTCKKGTVACGQPPVVENAKTFGKMKPRYE
INSLIRYHCKDGFIQRHVPIIRCQGNGRWDLPKITCMTPSSFQRTYPKKYYYKHSSPGKG
NSLNSSKHFHRWIRTWQDSRR
NT seq
8886 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaaatattatggatgtgttggaccttggccatcgcacatgcgcttcgcaaa
gttaaagtagaaaaaagcccaccagtgaagggcttgcttgctggaagagctgtcctccca
tgcttcttttcgaccttgccaactctgcctcctagttactacaacaccgctgaatttctc
cggattaagtggtcgaagattgaacaggacaaaggtggaaaagatttaagagaaaccaca
gtattagtggcccagaatgggaatatcaagatagggcaaggctatagagggagagtgtcg
gttccaacccatccagaagacattggagatgcatcattgactatggtgaaattgcgggca
agtgatgctggggtttaccgctgtgatgttatgtatggaattgaagatactcaagacatt
gtctcactggctgttgatggtgttgtgtttcattatcgtgcagcgtctagtaggtacacc
ctgaatttcaagcaggctcagaaggtttgtttggagaatggtgctgtaatagcgaacgct
gatcagctcaaagctgcatatgaggatggatttgagcaatgtgatgctggctggctggct
gaccagactgttagatatcccatcagacaacctagagttggctgctacggagacatgatg
ggaaaggaaggagtcagatcctatgggcgtcgtcttcccaatgaaacttatgatgcctat
tgctatgtgggaagcttaaaaggtgatgtcttccacataactgctccgaataagctaacc
ttcgaagaagccaaaagtcaatgtgaggcacaagatgcggttcttgcgtctgttggtgac
ctgcatgccgcctggaggaatggctttgaccagtgtgactatggctggctggctgatggc
agtgtgcgttatccagtgtctgtggcaagaatccagtgtggcggaggtttacttggagtg
cgcacactatatcgctatgagaatcaaacaggctttccttatccagacagcagatttgat
gcctactgctttcaacataagaatgtgtctgatgctacatctgttgaactaaatatatct
gtggaaaatggatcgtctaacttattaactgaactgaagataataccccctaaagatgca
tttcatccccacatctcttcagtcgcaccaggagtgactaaagcaaaacagaaagagaag
gtacctgaaataattactttacccactattctacctcagactgttgcagaattttctgat
tcatcaaaattgagagaatcagatactgtactgaatgacctagtaatagtcacacctaca
gaaagtgtctttgaccacagtgaagaaatttctgaaagtcagactgaacaaatagaggtg
gcaccaataagaacttctgtagatgctctactgaaaagcaactttagtcaacctgtggaa
acaggaacttctgttacaccaacaaaagaaggaacacatcttgccatcaagcccacaaaa
caatcaatggaagtaaaaagtgacacaaaactcacaacagttctcattcccaaagaggag
ctcactgatgacaatggggctgtgatgcctgatgaatggctggaaacttccagcactgat
ccagaattaaaggtagtgaaagagcccaagctattcttagataagaatgctacatctatc
attcaaacagaacccagtagtcgagatcaagatacggagaaaccagctactgtctcagac
tctgcagcaggggcaacaaagttttctctgacacctgaacatgaccagactgctgaagga
tctgcatatgaagagaaatacgcagttacagaagctttgggtccaattatgaaaatagct
acatatgaaaccagcacaaagtttcctggaatggatgttgtcactgcacaaaagctaact
actagtatggtgttgcccacaaagccgagcccggagagtgaagatggagtccccacaatc
aaatttaaagaaaccttttctacaaaagctgttacgcatgtccctgaagaatctactgat
atgggaaaagcaaaggctgtcacgactcatagcccagaaggttccggaacaacagaagac
atcctaggaacagagtctgttttattttctgcccctgcaacaagtaaaccaacagtgata
agtggcatagccacaactacttttgctgcagtagacaaaatcctacctacttcagcatcc
aaatctttaattaccaaaacacagccacctttgatggaatgggaacctgatgaagatgca
ggcatagacgtactaataattgatgaatccatttctcccattaaaaccaccactgatgat
gattttgcaggcaagaaggcagagccagaaattgatacagaatattttacatcatccagt
gttactgcagttgcacagccaacaggatcacccacggaggtgttagagtcccaagaaaag
cctcctacttcagatgaagtagggtttgaaaacaaagctgacataaaagtaattgttgtt
agtatcgcaggcaatgatacagatacattacatggagtttggaacatcttgggctaccca
gttcattcagatgaagtagatgaatcccctacagattctgaaccaacacatgatgaaccc
tgcacagcaacccctgaggaagagtcttcagaattcataattgtagaccctttctaccca
tttgttgaggaggaggaggaagactgtgagaatactactgatgtcacaactcccccagct
ttgcagtttatcaatggaaagcaccaggtgactactgcaccaagggatacaaaagctgaa
gaagcaaggagtgaccagattgaaagcttagcacactccaaaaatgttaccttttcacac
atcaatgatactaacttgatttctgagaatgaggtctctactccaaagcagccaaatgaa
tccactgaagtgataggagaaactgtagttacacaaaagctaatgtcagagcttaccatg
acagaacttatttctagtggggattcagatgtttctgttagagataaaatctttgaaata
acatctctgcatagcgagtcctcagacacaacagaaaaatcaacacaatctggtacagat
tttaatgaaatcttaagtaaacaccatcacattttctctttaattagttcagaacactca
ggagatttcactaccaagactgatttaaacacacatgccttttcacatacaaccgagaca
actccaaaagaagattctaaaacattttcttctacaagttttgcttcaagttggatacat
ccttatatcactgtacccccaggcagggaagaaaacacagtgtcagaaaatgatgtttct
attctacaggatgggtataaatcaacaattaaatctgatatacttccttctgctgaaagt
ttattggaaagaactagaactcctatttcactctatgtaccagaaggctctggaaatact
caagagaatgctgaatctaccagtgaatctgaatctacaataaaaacagcagggacagaa
aaaattcatgtccaggaaattttctcagatgctgacaagcaaattcctaccaaaactacc
ccaagtttctcacagcctcctaatttattgtataaggagactagttctacacttaaacaa
agttacatagaagctactactacccagtcttttactgaattaattttaagctctatgaaa
aatacatcagaagcagaggagaatatagaagaggttgaaagtaccatttcctcagctaat
gaatattcaactactgttcagactgaaaatttgttgtttagtaatgactctgcaagcttt
agtaatgatatcggagtggtaaaccaagaatccataatcacatcagggacagatgttcca
tctcttaaaactgaggaggccacagaaaagagactgcccatagatgaagaatctggggat
gggtctacagatgcttggatgtatcctggcagagacatactttgggggggtcccacaagt
aaagtggtaagtactgactcctcatttatagatccaggctctggagaagttgatgtgact
caagctactacattcacttcattctcattgcagtccggacctcaaagcactgagaaacaa
gtacaggagatagacacccttagcagggatgtatcacttttgaaatactcagtaacggtt
gagcctacaatgccagtgctggatactgaatcacatggggaggggatggaaaccagaaca
gaaagtgaagtaccaaagaatgtaactgatcaccaaggagcactacaagaattaggcaca
gtcgtattgtcagttagtgaaaagtctattggagaatctgctgaagaagtgataatatct
tctacagcaaaagaagaaaacatggacttatttgagacttctggtgtgacagcatctgtt
gaatcttcaacacactttgcccctgacatcattgtgactgatggcatcaaaagcataaag
ccagtaactgaattaagtgaaagtagaagcactgtaataatttctcccagtgttcctaca
gtattgaaagatagcatggtctcacaagaagaaggctctccatttatgataaatgataca
ataaactctgctcaaccagaaagcacaactcatctttctccaaccacttttgcagagaaa
cttgagcttgcagatgtgggttctggaggggaatcaaaagatggcaaaagtggtatagca
ctagtgcctcatggtccatcagaaagagtaattaatactgaactcccatttattgaagat
ggttctggagacaagggctcttttacagatcctctgatacaaaccacagttccatcacaa
ttactggtagaaatgcctggaactcagacagtaaaagatgaaaaccaacacagcagcatg
acatctaggtatcaggtgtatacagatgcacctgcaaagttagacataggtagtacctct
acgatcaccttaacaaatacagggattagaagaaaggtaccaaatatggatcaggaaaca
cttgctgaattggaaacaagaggtttacctacaattcttcctttagaacatgaagtgaat
tctgataatgaaggtgcagctgaaatatcaggggatatggtacagacacctgacgtggta
agacaatattttgtaaaaggtacagaatctataactaaacaagctgagattttaagtgga
tctacattttctccatatgtagaagaaataacatttcaagttacatctgatactgaatca
tatagtaaaaccctcacaacagaatctgaaacatttcaaaacaaagctgtaagtacttca
tcaacgattgcagagaaagaagaatggttggtagaaaatgttcatcctactgaagatagc
cacaaacctctttctgtttctacaccgtatgagccaacaagcatgccaatcattaatgct
ccctttttttcagaacaaggttctggagatgtgttattcacagatcaatcagccattgta
catgcaagttctactacagtaaaagaaagcacaagcacattcaattatgatattcttcat
cctaagagttcagaagccacatttgcagtggaaggaattaaagaatttgacagacacaca
tctgactcaagtgacgattcagacaatgaaatccaatatccacatactgtagcagatgca
ttttctgcaacaagtcacaaaacagtaactactgcatctaccctggatgtgtgggtcact
gacactgaagcatccaccataaagcagcttgtttctgaacattattccaaacaagaaaat
agcagtcaagaggaagaaaagataacatcatcaacagcagctgtcactgatagaatttcc
caagggcaagcctcacatgtgatgaagcatgaagatacaactcctgtttctgaattattc
acaggaaagcctactcctagaacagttaaagcacctgcaaccacctcagaacccaatatg
ctgactgtaaaatatcatgaaggttctggggaaggttctggttggctggacattgcagga
aaacattcggaatcacctacccagttgccagaaagggaacaatcatttgcatctcagagc
tcaggtgaaaagaattcagaggtcatgaaaccagatctagcagtgaatggaacgcagatg
gtgccagtatcatcacccatctttagagaagaaaagcaaacgcgaccaacttcagagagt
gacttttcagagacatttgcagatgaaagttccacaaacagcttaaaagactatgaagaa
cttataccaattattgatgaaaaaaggaattattctggagataaaccaagccttattgat
gtaattggagaaggccatggaataatatctgatgaaacaaccattatagatgttgataac
ctgaagtcagatattgaagatataagtggccaaatgactgtgagtcccgaaagctactca
gagtatggtatttatactttaaccatggaaattcagcatacaacacctgacaatacttta
actgatgataaatctgacagttttggagacggaagttctggaacaagtcaagtcatatac
agtgaacccacaatatctgaaaagtcagtaacagcagatgacacaggctcaggagatgcc
atacttcccacagcagataccaccatctctcaagaggttcctaaaacagccactttcctt
ccaaccacaccacttttcatcagccctatgatatcttttcccatcagttccaaagctgat
gaaaaggacaaagaactagagtttgaaactaaacatacagaatctacaaagacaatagaa
gacaactttgaattacaaacattgtcagacaatcaaacaatgatcgaggaaagaaaattg
gattccaccaccagcactttggtcaaagagcaagtagaaatgcatgaaaaagagtatgtt
gctccttcccctacaacaccacagctacctgttaaaatagatcaagcttcgacaacacac
aagtatggagaaagcactgtctcccaaagttcaatgatgcctgaaaaaacaagtcatgac
acttttgaaggaatgcgaactttagccacagcattaatagaaccagatccaaaagcatta
cttcttacaactgagccccccaaatcacctgtgactgtctatttactcaagaaagtttct
gaataccctgaagaaatcatgccaagcacttcatcatccactgattcagataagagcagt
ttttcagaaatacaaacctttaaagaagctagtgccgacatggcagcaacttacaaacct
gccatgaatcagtcttcagagatttcgttatcatcctcatctgagttggaagtagagagc
aagatcactgaaagcacaactgtttccagttggcagataacagaaattaaagaagggcca
acagaaatgacagttgcagaagaaaccatcatttccagagacccattatcaagagaagct
aaaccaaccattacaactatagaagttagctcagaagaaggaacctctcacgagaaggta
aaggaactagatcactcagatgaaaatagtgcagagggagccttgccttggatacatacc
acagctccatctattccacatgagagtaaaacaggtggcgtatttggtgttgatgggaaa
gctgatgcttggcctatttcatccccaccatctatggatacaactgtggagctccagact
gagcaagagccagtaacaatttcctctaatgctgcaactaaaagcccagggcccgaaagc
attcctgattataacgaacagacaaggaacactgaggatatgagcacaaatgaacttgta
actctgccatttttacttccggatgttactaatggatcagatttcctagttgccacaggt
gggggttcggtggaaggcacagcggttcagataccaggccaagatccatgcaaaagcaat
ccatgtctgcatgggggcacttgctatccacgcgactctttctacatctgcacttgtatg
ccgggtttcagtggtgaccagtgtgaagtagatgtggatgaatgtcaatccagcccttgc
agaaatggagccacatgcatcgatggtgtcaacacatttacttgcctttgccttccaagt
tacgttggggctctttgtgaaaaggacactgaaacctgtgattatgggtggcacaagttc
cagggccagtgctacaaatactttgctcatcgccgcacatgggacgcagcagagagagag
tgccgcctccagggggcccatctgacgagcatcctgtctcatgaggagcagctctttgtg
aaccgtataggacatgactaccagtggattggtctaaatgataaaatgtatgaaagtgac
ttccgctggactgatggcagtgttctgcaatatgaaaactggagaccaaaccagccagac
agtttcttttcttctggagaagattgtgttgttataatttggcatgaaaatggccagtgg
aatgatgtaccatgcaattatcatctcacctatacctgcaagaaaggaacagttgcctgt
ggccagcctccagtagtagaaaatgccaagacatttgggaagatgaagcctcgttatgaa
atcaactcattgatcagataccactgtaaagatggtttcatccagcgtcatgttccaatc
atccggtgccaagggaatggccgatgggatctgcctaaaattacctgcatgactccatcc
tcattccaaaggacttatcctaagaaatattattataaacattcttccccaggaaaggga
aactcattaaattcatctaaacattttcatcgctggatcaggacatggcaggattcaagg
cgctga
DBGET
integrated database retrieval system
