Varanus komodoensis (Komodo dragon): 123031396
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Entry
123031396 CDS
T07701
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1 isoform X1
KO
K06225
patched 1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
123031396 (PTCH1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
123031396
NCBI-ProteinID:
XP_044302237
Ensembl:
ENSVKKG00000008618
UniProt:
A0A8D2JGJ2
LinkDB
All DBs
Position
Unknown
AA seq
1503 aa
AA seq
DB search
MKKWSVSSSSRESPPSQPVPGPPGSPQSGSSSVLGRTAEHPASGTPEQQQRQPRLCGGNM
ASAVNASEPENGGGGGCSREPDRPGRSGTRRRRRTGGGNRRAAPPDLEYLQRPSYCDAGF
ALEQIAKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLRAAN
LETNVEELWVEVGGRVSRELSYTRQKIGEEAMFNPQLMIQTPQEDHANVLTTEALRQHLD
SALQASRVHVYMYNRQWKLEHLCHKSGEPITETGYMDKIIEHLYPCLIITPLDCFWEGAK
LQSGTAYLPGKPHLQWTNFDPLEFLEELKKINSQVDTWEEMLNKAEVGHGYMDRPCLNPD
DPDCPITAPNKNSTKPLDVALVLSGGCYGLSKKYMHWQEELIVGGTVKNSTGKLVSAQAL
QTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRMYVEVVHQSVAQNATQKVL
SFTTTTLEDILKSFSDVSIIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVALS
VAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGEC
LKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDL
YRREDRRLDIFCCFTSPCVSRVIQIEPQAYAEAGDNTRYSPPPPYSSHNFAHETQITMQS
TVQLRTEYDPHTQVYYTTAEPRSEISVQPVTVTQDNLSCQSPESTSSTRDLLSQFSETTL
HCLEPPCTKWTLASFAEKQYAPFLLKPKAKIVVIFLFLGLLGLSLYGTTRVRDGLDLTDI
VPRETREYDFIAAQFKYFSFYHMYVVTQKADYPNIQHLLYELHKSFSNVTYVMLEENKQL
PKMWLHYFRDWLQGLQEAFDSDWKSGKITLNNYKNGSADAVLAYKLLVQSISGIRDKPVN
ISQLAKQRLVDADGIINPKAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPV
TIPEAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRAICDNYTSLGVPSYPNGYPFLFWEQY
IGLRHWLLLSISVVLACTFLVCALFLLNPWTAGIIVVVLALMTVELFGMMGLIGIKLSAV
PVVILIASVGIGVEFTVHIALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLA
GSEFDFIVRYFFAVLAILTILGALNGLVLLPVLLSLFGPYPEVSPADGRSRLPTPSSEPP
PSIVRFAIPPGHAQNGSDSSDSEYSSQTTVSGISEELHQYEATQRTSAPVHQVIVEATEN
PVFARSTVIQPEMRYAQPSPRSQPNQEPGSQQAWHQHKKPKREPREGLRPPPYRPRRDAF
EMSTEGHSCPNNRDFSSHRAQSQNIRNPTFTATGASVPPYCQPITTVTASASVTVAVHPA
VHGHNTCGGGFPPYEGYHEADHGQFEDPHVPFNVRCERRNSKVEVIELQDVECEERTCSN
SSE
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtggtctgtcagcagcagcagcagagaatctccaccaagccagccagtcccc
ggtccccctggatccccccaaagcggcagctccagcgtgctggggcgaaccgcagagcac
ccagcctctgggacgccagaacaacagcagcgacagccccggctctgcggcggcaacatg
gcctcagctgttaatgcctcggagccggagaacggcggcggcggcggctgcagcagagag
ccagatcggccggggagaagcggcaccaggaggcggagaaggaccggcggcgggaacaga
cgcgccgcgccgcccgatctggaatatctgcagcggccgagctattgcgatgcagggttc
gccttggagcagatagcgaagggaaaggctactggaagaaaagcaccgctgtggctaaga
gcaaagtttcagagactgttatttaaactgggctgttacattcaaaaaaactgcgggaaa
tttttggtggttggccttctgatattcggagcttttgctgtgggattaagggcagccaat
ctcgaaaccaatgtggaagagctctgggtagaagttggtggacgagtgagtcgggagtta
agttacacacggcagaagattggagaagaggccatgtttaatccccaactcatgattcag
acaccacaagaagaccacgctaatgtactaacaacagaagcactcagacagcaccttgat
tctgcacttcaagcgagcagggtacacgtatatatgtataacagacaatggaaattggaa
cacttatgtcacaaatcaggggaacccatcacagaaacaggttacatggacaagattatc
gaacatctttacccttgtttaattatcacacccttggactgcttctgggagggggcaaag
ttacaatcagggactgcatacctaccagggaaaccccatttgcagtggacaaactttgat
cccttagaattcttagaagagttaaagaaaataaactcccaagtagatacctgggaggaa
atgctgaataaagcagaagttggtcacgggtatatggatcgaccttgcttaaatcccgat
gatcccgactgccctatcacagcccccaacaaaaattcaaccaaacctcttgacgtggct
cttgttttaagtggtggatgctatgggctatcaaaaaaatacatgcattggcaggaagag
ctgattgttggcggcacagttaaaaacagtactgggaaacttgtcagtgcccaggcgtta
cagaccatgtttcagctaatgacccctaaacaaatgtatgagcacttcaagggctatgaa
tatgtctcgcacatcaactggaatgaggacaaggcagctgcaattctggaagcctggcag
aggatgtatgttgaggttgtacatcaaagtgttgcacaaaacgctactcagaaggtgctt
tcctttactacaactactttggaggacatcctaaaatcattttctgatgtcagcattatc
agagttgccagtggctacctactcatgctcgcctatgcctgtttaaccatgctgcggtgg
gactgtgctaagtcccagggtgccgtggggctggcaggagtcttgttggttgcactctcg
gtagctgcaggattggggctctgctcgttgattgggatttcctttaatgcagccacaact
caggttttaccctttcttgctctaggagtcggtgtagatgacgtcttccttttggcacac
gcatttagtgaaactgggcagaataagagaattccatttgaggatagaacaggggaatgt
ttgaaacgcactggagcaagtgtggcccttacatctatcagtaatgtaactgcattcttc
atggctgccttaattcccattcccgctctacgggcattttcactccaagctgctgtagtc
gtggtattcaactttgccatggtgttgttaatttttcctgctatcttgagtatggatttg
taccgtcgtgaagaccggaggctggatatattctgctgctttacaagtccatgtgtcagc
agagtcattcagatcgaacctcaggcatatgcagaagcaggtgacaacacacgctacagc
cctccgcctccctacagcagccacaattttgcacatgaaactcaaatcacgatgcagtcc
acagtccagctgcgcactgaatatgaccctcacacccaagtttactataccacagcagaa
cctcgttcggaaatatcagtgcagccagtcaccgtgacacaggataacctcagctgccag
agtccagaaagcacaagttcaaccagggatctcctttcccagttctcagaaacgacattg
cattgccttgagccaccctgtactaaatggacactagcctcatttgctgaaaaacagtat
gctccattcctattaaaaccaaaagcaaagattgtggtcatttttctttttctgggctta
cttggcctcagtctttatggaactactcgtgtgagagatggcctggatcttacagacatt
gtgccacgggaaacacgggaatatgacttcattgcagctcaattcaagtatttctcattt
taccacatgtacgtggttacacagaaagcagattatcccaacatccagcatttactttac
gaacttcacaaaagttttagcaatgtgacatacgttatgttggaagaaaacaaacagctt
cccaaaatgtggttgcactactttagagactggctacaagggcttcaagaggcttttgac
agtgactggaaatctgggaagatcacactcaacaattacaaaaatggatctgcagatgct
gttctagcatacaaacttttagttcaatctatttcaggcattcgggataaacctgttaat
attagccagttggctaaacaacggctggtggatgcggatggaatcattaaccccaaggct
ttctacatctacttgacagcctgggttagcaatgaccctgtggcttacgctgcctctcaa
gccaacatccggccccatcgtccagaatgggtccacgataaagcagactatatgccagta
accatcccagaagctgagcctattgaatatgctcagtttcctttctacctcaatggattg
cgtgatacttctgactttgtggaagctattgagaaagttagagcaatctgcgataactac
accagtcttggggttcccagttacccaaatggatacccattcctcttttgggaacaatat
attggccttcgtcattggctcctcttgtctattagcgtggttctagcctgcacatttctg
gtgtgtgccctcttccttctgaatccctggacggctgggatcattgtggtggtgctggct
ctgatgacggtggagctctttggcatgatgggcctgattggaataaagctgagcgcagtg
cctgtagtcatcctgattgcttctgttggaattggagtggagttcaccgttcatattgcc
ctggcatttttgactgcaataggagacaagaatcgcagggctgtcctggcgttagagcac
atgtttgcgcctgtattggatggagctgtgtctacgctgcttggtgtattaatgcttgca
ggatctgagtttgactttattgtcaggtatttctttgccgttttggccattttaaccatc
ttgggtgctttgaatggattggtgctacttcctgttcttctttccctgtttggaccatat
cctgaggtttctccagctgatggaaggagcaggttacctaccccctcttctgagccaccc
ccaagcattgtgaggtttgccataccaccaggacatgctcagaatgggtcagattcttct
gattctgagtacagttctcagaccacagtatcaggaataagtgaggagctccatcagtat
gaagctacgcaaaggactagtgccccagtccaccaagtcattgttgaagcaactgaaaat
ccagtatttgccagatccactgtgatccagccagagatgaggtatgcgcagccaagtcca
agatcacagcctaaccaagagcctggatcccagcaagcatggcatcaacataagaaaccc
aaaagagaaccaagggaaggactccggccacccccatatcggccacgcagggatgctttt
gaaatgtctactgaggggcattcttgccctaataatagggacttttctagtcatagagct
cagtctcagaacatcagaaaccccaccttcactgccacaggggcttcggtgccgccttac
tgccagccgatcactactgtgactgcctccgcttcagttactgtcgctgtgcatcctgcc
gtgcatggtcacaatacttgtgggggaggctttccaccctacgagggataccatgaagcc
gaccatggacaatttgaggaccctcatgtgcctttcaatgtccggtgtgagaggaggaac
tctaaagtagaagtaatagaactgcaagatgttgaatgtgaagaaaggacttgtagcaac
agctcagagtaa
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integrated database retrieval system
