Varanus komodoensis (Komodo dragon): 123031399
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Entry
123031399 CDS
T07701
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03420
Nucleotide excision repair
vko04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123031399 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
123031399 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vko04121
]
123031399 (ERCC8)
03400 DNA repair and recombination proteins [BR:
vko03400
]
123031399 (ERCC8)
Ubiquitin system [BR:
vko04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123031399 (ERCC8)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
123031399 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
123031399
NCBI-ProteinID:
XP_044302244
Ensembl:
ENSVKKG00000004031
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MLSFISARQSGLDEPLRLRRAESTRSFTFSRVLSLELNKDKDIEQIHGSGINTLDIEPVE
NRYMLSGGSDGVVVLYDLENLSRKPCYTCKAVCSVGRSHPDVHKFSVETVQWYPHDTGMF
TSSSFDKTLKIWDTNTLQPADVFNFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKS
GSCSHILQGHKQEILAVSWSPRYEYILATASADSRVKLWDVRRASACVLTLDQYSGEKSK
ASSETETRVVHIIFAVNTAHNGRVNGLCFTNDGLHLLTLGTDDRMRLWNSSTGENTLVNY
GKVCNESRKGLKFTVSRGCSPEFAFVPCGNTVAIYTIYSGELISVLRGHYNSVDCCVFQP
DFQELYSSGRDSNILTWVPSLRQPEPDDTSDEKKFLNPAFQDTWSGSEDDDDG
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgctgagttttatttccgcccgtcaatcaggattggacgaaccgctgaggcttcgccgg
gctgagtctaccaggagctttactttttcaagggtattgagcttggagttaaacaaagat
aaagatatagaacagatccatggaagtggcatcaacaccctggatattgaacctgtggaa
aatcgatacatgttatcaggaggttcagatggtgttgttgtattatatgatcttgaaaac
ttaagcagaaaaccatgctacacctgtaaagcagtttgttctgtgggaagaagccaccct
gatgttcataaattcagtgtggagacagttcaatggtatccccatgatactggcatgttt
acatcaagttcatttgataaaacactgaaaatatgggatacaaacacattacaaccagcg
gatgtgtttaattttgagggaactgtgtacagccatcacatgtctcctgttgctaccaag
cattgcttaattgcagttggtaccaaaagccccaaagtacagctttgtgacttgaagtct
ggatcttgttctcacattctgcagggtcacaaacaggaaatactagcagtatcttggtca
ccacgatatgaatacattttagcaactgcaagtgctgacagtagagtaaaattgtgggat
gtgaggagagcatctgcttgtgtacttactcttgatcagtacagtggtgagaagtcaaaa
gcatcttctgaaactgaaaccagagttgtccatattatctttgcagtaaatactgcacat
aatggaagagtgaatggcttgtgttttacaaatgatgggcttcatcttctgacacttggc
acagatgaccggatgagactctggaacagttccactggagagaacacactggtaaattat
gggaaggtgtgcaatgaaagtagaaaaggactaaaattcactgtgtctcgtggctgcagt
ccagagtttgcatttgtgccatgtggtaatactgttgctatttacacaatttattcagga
gaactcatatctgtgcttagggggcattataattccgttgactgctgtgtttttcaacct
gatttccaggaactttatagcagtggcagggacagcaatatccttacctgggtcccatct
ctgaggcagccagaacctgatgatacttctgatgaaaagaagttcttaaatcctgcattt
caagatacatggagcggcagtgaagatgacgatgatgggtga
DBGET
integrated database retrieval system
