Varanus komodoensis (Komodo dragon): 123031482
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Entry
123031482 CDS
T07701
Symbol
MSH3
Name
(RefSeq) DNA mismatch repair protein Msh3 isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123031482 (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vko03400
]
123031482 (MSH3)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123031482 (MSH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
123031482
NCBI-ProteinID:
XP_044302441
Ensembl:
ENSVKKG00000003076
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MPRGRRRPSRGSGSRGQPVLSRFFQPVGCLLSAASASAPLSAAVNSDEERSEGSLAVPAV
ALQTSHEPSGKKRKGVEIKEHTDNCSESLKNRKKEEGNTMSMLNTGEPKKYTSPRICAQT
LDRLRAFSNHSEHSSSTVRSEEIPSVDLKKCQHSVLETNEMSDTPYPQDNSKEEIRLSIS
PYSVLKTNTEDTQNKSDATLNKTTKTGYTPLELQFLEMKNQYKDAILFVECGYKYRFFGD
DAEIAAKELNIFCHKNHNFMTASIPTHRLFVHIRRLVAKGYKVGVIKQMETAALKSIGEK
RSSLFARKLTALYTKSTLLGEDVNPLLKHDNLLEAEEILTDVCDNYLLCISESKENVRNK
NQNIVIGIVAVQPTTGEVIFDSFKDSAVRLELESLIFRLRPVEIILPKNVSDQTEKLINS
VTSVSLQDDRIRIERMENKNFEYSNAFQLLTDFYSSRTLVGTGSQALSMILNLDKPVLCS
LAAVLMYLKEFNLEKILYSPGNFKQLSSEAENMTLNGITLKNLEILQNQTDMKAKGSLFW
VLDHTQTSFGRRRLKKWVMHPLLKSSEINSRLEAVSEVLLSESSVLGQIKTLLYKVPDVE
RGICSIYHKKCSTQEFYLVVNTLSQLETAITALVPAIRTQVQAALLRESLLEIPELLCST
KKYLSRLNEDAAKTGDKAELFKDLADFPVIRKRKDEIQAVVCQMRTHLQDIRRMLNSPSV
DYVTVSGQEFQIEVKNSRVSSVPSDWIKVSSTNAISRFHTPFIVENYRHLNQLREQLVLD
CSAEWLHFLDHFTDHYHSIAKAVGHLATVDCIFSLAEVARQGDYCRPVIKDEQSEIMIKN
GKHPVINVLLGEQEQYVPNDTHLSADGQRVMIITGPNMGGKSSYIKQVALITLMAQIGSY
VPAEEARVGIVDGIFTRMGATDNIFKGHSTFMEELTDTAEIIRKATSRSLVILDELGRGT
STHDGIAIAYATLEHFIRDVGSLTLFVTHYPPLCELERAYPRQVGNYHMAFMVSEDTKEQ
EKECEENPEFVTFLYRLTREVASRSYGLNVAKLAEVPEEIIKKASQKSKQLERLTDMKRK
RLMAFARLWNTNDAGELQRWKTECETDTDLSQL
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggggcgaagaaggcccagccgtggcagcgggtcccgcgggcagccggtgctg
agtagattcttccagccggtgggatgcctgctttcagccgcttctgcctcggctcctctt
tctgctgctgtcaactcggatgaggagagaagtgaaggctctttggcagtccccgcggtt
gccctgcagacgagtcatgaacccagtgggaagaagagaaaaggtgtggaaattaaagaa
catacagataattgttcagagtctctgaagaacagaaaaaaggaagagggaaatacaatg
agtatgctgaacactggagaaccaaagaaatataccagccctcgaatatgtgcacaaacc
cttgatagattgagagcgttctctaatcattcggaacattcaagtagtacggttcgttca
gaggaaatcccttctgtggacttgaaaaaatgccagcattctgtgcttgaaactaatgaa
atgagtgacactccatatcctcaagacaatagtaaggaagaaatcaggctaagtataagc
ccatattctgtcttgaaaacaaatactgaagacactcaaaataaatctgatgcaactctg
aacaaaacaaccaaaactggatatacaccacttgagctccagttcttagaaatgaaaaat
cagtataaggatgctattttgtttgttgagtgtggttataagtacagattttttggagat
gatgccgagattgctgctaaggagctgaacatcttctgtcataaaaatcacaactttatg
actgcaagcattccaactcacagactatttgttcatattcggcgtcttgtagcaaaagga
tataaggtaggagttataaagcaaatggaaactgctgctttgaagtctattggagagaag
agaagttccctttttgcgcgaaaattaactgcattgtatacaaaatctacccttctagga
gaagatgtgaatcctcttctgaagcatgataatcttttggaagctgaagaaatactaact
gatgtctgtgataattatcttctttgtatttctgaaagcaaagaaaatgtaaggaataag
aatcagaacattgtcataggcatagtggctgtccagcctactacaggagaagttatcttt
gacagttttaaggattctgcagttcgtttagagttggaaagtctaatttttcgcttgcgg
cctgttgagattattcttcctaaaaatgtatcagatcaaactgaaaagctcatcaactct
gtgacttctgtaagtttacaagatgacagaattcgaatagagagaatggaaaacaagaat
tttgagtacagcaatgctttccagcttcttacagatttctacagcagtcgcacacttgtt
ggcacaggttcccaagcactgtctatgattttaaacttggataaaccggtgttatgctct
ttggctgctgtactcatgtatcttaaagaattcaatttagaaaaaatactctacagccct
ggtaattttaaacagttatcaagtgaagctgaaaacatgacacttaatgggatcacactg
aagaatcttgaaatcttacagaatcaaactgatatgaaagcaaaggggagcctgttctgg
gtcttggatcatacacaaacttcatttggccggcgaagattaaagaaatgggtaatgcat
cctctcttgaaatcgagtgaaattaattctcgacttgaagctgtgtctgaggttctcctg
tcagaatcaagtgtccttggtcaaattaagactctcctgtataaggtgccagatgttgag
agaggaatctgtagtatttatcacaaaaagtgttccactcaagagttctatctggtggtt
aacacactctcccagttggaaacagcaatcacagcactggttccagctatacgtactcag
gtgcaagcagccttattacgtgagagcctcttggaaattcctgaattactttgttcaaca
aaaaagtatttaagcagacttaatgaagatgcagcaaaaactggagacaaagcggaattg
ttcaaggatcttgcagattttcctgtaataaggaagaggaaggatgagattcaggcagta
gtttgtcagatgcggacacaccttcaggatatacgaagaatgctaaattccccctctgta
gattatgtaacagtatcaggacaagagtttcagattgaagttaaaaattcccgtgtgtct
tctgtaccatcagactggattaaagttagcagcacaaatgccatcagccgtttccacact
ccttttattgtagaaaattacagacatctgaatcagctacgtgagcaactagtccttgac
tgcagtgctgaatggctacactttttggatcattttactgaccattatcactcaatcgct
aaagctgtgggtcacctagcaactgttgactgtatcttttccttggctgaggttgccaga
caaggagactattgcagacctgtcataaaagatgaacagtcagagataatgataaaaaat
gggaagcatccagtgataaatgtattattgggagagcaagagcagtatgttccaaatgac
acacacttatctgcagatggtcaaagggtaatgataattactgggcctaacatgggtgga
aagagttcttacataaagcaagttgcattgataactctaatggcacagattggttcctat
gtaccagctgaagaagcaagagttggtattgtggatggcatattcaccagaatgggtgcc
acggacaacatatttaaaggtcacagtacatttatggaagagctgacagatacagctgag
ataattagaaaagcaacttcacgttcactggtaatattggatgaactggggagaggcact
agcacacatgatgggattgcaattgcttatgctactctggagcattttattagagacgtg
ggttcattgacactatttgtcacccattatcctccattgtgtgaattagaaagagcctac
ccaaggcaagttggaaattaccatatggcttttatggtgagcgaagataccaaggaacaa
gaaaaggaatgtgaagaaaatcctgaatttgtcactttcctttatcgactaacaagagaa
gttgcttcaaggagttatggactaaatgttgcaaaattagcagaagttcctgaagaaatt
attaaaaaggcatctcaaaaatcgaaacagctagagagattaacagatatgaagagaaaa
agactaatggcatttgctagactttggaatactaatgatgctggagaattgcaaagatgg
aaaactgaatgtgaaacagatacagatttgagccaactgtaa
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