Varanus komodoensis (Komodo dragon): 123032800
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Entry
123032800 CDS
T07701
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123032800 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123032800 (THOC5)
03041 Spliceosome [BR:
vko03041
]
123032800 (THOC5)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123032800 (THOC5)
Spliceosome [BR:
vko03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123032800 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF4175
Motif
Other DBs
NCBI-GeneID:
123032800
NCBI-ProteinID:
XP_044304873
Ensembl:
ENSVKKG00000009259
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGGPQEGKRGKPDADQDAKYYSEEAEVDLRDPNKDYELYKQTCQ
DLQKLMAEIQELKSKGSKDSAGEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVTVEEFYKEAPPEISKPEITR
SDPHQQTLSRLDWELEQRKRLAEKYKESLANKEKILKEIEVKKEYLSNLQPRLNSIMQAS
LPVQEYLSMPFDQVHKQYEMARHLPPPLYVLFVQASAYGQACDKKLAVAIEGSVEEAKAL
CKLPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLRRHPLSVTVELTCKDGSLL
LLTFYYLMNLNVMTVKARVTTATEMTMPVSAGDLLSLDSLLSCLYHRDHGKKTPNPANQF
QFDKVGIVSLNDYVTELGHPYMWVQKLGGLNFPKDQPQSPVVADNSLSASHMERTMKLLK
MRLESRLALHKQFASLVFLTSRTPRMSLACAFLQALLFSSLDVTPGLLCRAVMKRFDVLH
KWCSEHGILPVSSECQHLFPAKIVSRLTKWTAITYEDYLELPYTKDVVEAGLAEDTHLYY
MALVERGTAKLQAAVVLNPGYSSIPPIFSLCLNWKGEKTGSNDSNIRAMESEVSVCYKEL
QGPKPGHQLLTNQLQRLCVVLDVYLETETHDNSVEGPKEFPQEKMCLRLVRGPSRMKPFK
YNYPQGFFSHR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgactcaagcaagaaaaggaagcccaaagtcatccgcacagatggaggccca
caggagggcaagaggggcaagccagatgctgaccaggatgcaaaatactacagtgaagag
gccgaggtggatctgcgggaccccaacaaagattatgaactgtacaaacagacctgccag
gacctccaaaagcttatggctgagatccaagagctgaagagcaaaggcagcaaagacagt
gccggtgagatagaggagcgccgcatccagagctgtgtccacttcatgaccctgaagaag
ctgaaccgtctagctcacattcggttgaagaagggaagggaccagacccacgaggccaag
cagaaggtggacgcttaccatctgcagctccagaatctcctctatgaagtcatgcatctg
cagaaggagatcactaaatgcctggagtttaagtccaagcatgaagaaattgagctggtc
accgtggaggagttttacaaggaagcccctccagaaatcagcaagccagagattacgcgc
agcgaccctcaccagcagacgctctcccggctcgactgggagctggagcaacgcaagcgc
ctggcagagaagtacaaagagagcttggccaacaaagagaagatccttaaagagatagaa
gtgaagaaggaatacctgagcaaccttcagcctcggctcaacagcattatgcaggcctct
ctgcccgtccaagagtacctctcgatgccctttgatcaggtccacaagcagtacgagatg
gccaggcacctccctccgcccctctatgtgctcttcgtccaagccagtgcctacggccag
gcctgtgataagaagctagctgtggccatagaaggaagtgtagaagaagccaaggctctc
tgcaagcttccggaggattctcaagatgatgagagcgactcggatgccgaggaggagcag
accacaaaacgccgccgcccaactttgggggtgcagctggatgacaagcgcaaggagatg
ctcaggaggcacccactctcggtcaccgtggagctgacatgcaaagatggcagcctgctg
ctcctgaccttctactatctgatgaacctcaacgtcatgaccgtgaaagcccgggtgacc
acggccacggagatgaccatgcccgtcagcgccggagacctcctgtcccttgactccctg
ttgagctgcctgtatcacagagatcatggaaagaaaacgcccaatccagccaaccagttc
cagttcgataaagttggcatcgtcagcctgaatgactatgtcacggaactgggccacccg
tatatgtgggtgcagaaactgggggggctgaatttccccaaagaccagccacagagtccc
gtggtagccgataactccctgagtgccagccacatggagaggacgatgaagctgctcaag
atgaggctggagtcccgcctcgctctgcataagcagtttgcttcgctggttttccttaca
agccgtacaccccgtatgtctcttgcttgtgctttcttgcaagctcttttgttctccagt
ttggatgtaacccctggtctgctttgcagagctgtaatgaagcgctttgatgtactacac
aaatggtgttctgagcatggaatcctgcctgtctccagtgaatgccagcacctctttcca
gctaagattgtgtcacgcttgacaaagtggacagccatcacctatgaggactacctggag
ttgccctacacgaaggatgttgtggaggctggtttggcagaggacacgcacctgtactac
atggccctggtcgaaagagggacagccaaactgcaggccgccgtggtgctgaatcccggc
tactccagcattccacccatcttcagcctgtgcctgaactggaaaggggagaagacgggc
agcaacgacagcaacatccgggccatggagagcgaggtcagtgtctgctataaggagctt
caaggccccaagcccggccaccagctcctgaccaaccagctgcagcgcttgtgtgtcgtg
ctggacgtctacctcgagacggagacccacgacaacagtgtggagggcccgaaggagttt
ccgcaggagaagatgtgtctgcgcctggtcaggggacccagtcggatgaagccattcaag
tacaactacccccagggcttcttcagccatcgctga
DBGET
integrated database retrieval system
