Varanus komodoensis (Komodo dragon): 123032921
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Entry
123032921 CDS
T07701
Symbol
SMG5
Name
(RefSeq) protein SMG5 isoform X1
KO
K11125
protein SMG5
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123032921 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123032921 (SMG5)
03032 DNA replication proteins [BR:
vko03032
]
123032921 (SMG5)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123032921 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
123032921 (SMG5)
DNA replication proteins [BR:
vko03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
123032921 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
123032921
NCBI-ProteinID:
XP_044305071
Ensembl:
ENSVKKG00000008054
UniProt:
A0A8D2KVP1
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MSQGSGGGGGEPEAKALHTKRLYRAVVEAVHRLDLILGNKPAYQEVFKPENISLRNKLRE
LCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSHSTLECAYRTHLVAGIGF
YQHLLLYVQSHYQLELQCCIDWTHVTDPLMGCKKPVSASEKEMEWAQMACHRCLVYLGDL
ARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYSVEATYCYLRCIQS
EVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVSFLYLQTLLQPK
SSSVDSELTSLCQSVLEDFNLCLFYLPSPPNTSSANEDEEEYENGYSFLPDLLIFRMVVV
CLMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENAVPAFQNDGTEDP
EGREPLNSVERDAEANLANHRPAEEQKKSESKKGKKYSRLSCLRRRRHAQKGDESDLSEG
FDSDSSPGSTKGSDGSESGSEKSGEEAEAAFDVETDSDMNSQESRSDLEDMEGEVDAEGG
GQSRSMKNGAREALDAAEGEGGQPADVQSPGVAKAEAALEPVANGPGSLGPSDASIASNL
QAMSTQLFQTKRCFRLAPTFSNVLLKPNCELPAPKEDAGDKPCVNGDVEKASAAAEQDDV
SESEESLSSSKSCRNERSLQERLEILASEGLLPTVKVFLDWLRTNTDLIIMCAQSSQSLW
NRLSVLLNLLPSAGDLQDSGLFLCTEVKSMLPGCDLPDPSPCLLLPEDVALRNLPPLKNA
HKKFNFEQDRPALTEVEESVVRICCIRSFGHFITHLQGSILQFNSEVGIFISIAPSEQDG
LLQQAQAQLRMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPRAQCVMSPYLVPDTQA
LCQHLCTIRQLAASGRFIVIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQ
KEVGKSFERHKLKRQDLDAWNLCKILDSCKQLTASQGGGEDDTTGMVTIITGFQLEDLSK
LSAPMQSAIQAVGNANVEIKNVLEFYKQWKEMG
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggcagcggcggcggcggcggggagccggaggccaaggccctccacaccaag
aggctctaccgagcagtggtagaagccgtgcatcgcctggacctcattcttggaaataag
ccggcttatcaagaagtgttcaaaccggagaacatcagcctgcgaaacaagttacgtgaa
ctgtgtgtaaagctgatgttcttgcacccagtggattatgggagaaaagcagaggaattg
ctgtggaggaaagtttactatgaagtcatccagctcattaaaacgaacaaaaagcacatt
cacagccatagcacgctggagtgtgcctaccgaactcacctcgtcgccggcattgggttt
taccagcaccttcttctctacgtccagtctcactaccagctggaacttcagtgctgtatt
gactggacacacgtgacagatcctctgatgggctgcaagaagcccgtctctgcgtcggag
aaggagatggagtgggcgcagatggcctgccaccggtgcctggtttacctgggggatttg
gcccggtaccagaacgaactcgctggagtggacacagaattgctggctgagcggttttac
taccaagccctttctgttgcaccgcagatcggtatgccttttaaccagcttgggacactg
gctgggagcaaatactacagtgtggaagccacctactgctacttgcgctgtatccagtcc
gaagtgtccttcgaaggtgcttacgggaacctcaaacgtttgtatgataaggctgccaaa
atgtatcaccagctgaagaaatgtgaaaccaggaaactctcgccgagtaaaaagaggtgc
aaagacattaaaaggctactggtgagcttcttgtacttgcagacgctccttcagcccaag
agcagttctgtggactccgagctgacgtctctctgccagtcggtcctggaggatttcaac
ctctgcctcttctacttgccctctccacctaacacgagctctgccaacgaggatgaagag
gaatacgagaatggctactccttcctgccagaccttctgatcttccggatggtcgttgtc
tgcctgatgagcgtccacagcctcaaaagggcaggctccaagcagtacagtgcagccatt
gcgtttacactggccctcttctctcatctcatcaaccacgtcaacattcgcctgcaggcg
gagttggaagaaggcgagaacgcagttccagccttccagaatgatggcacagaggatcct
gagggccgggaaccattgaactctgtggagagagacgctgaggccaacctggccaaccac
cgtcctgccgaggagcagaagaagagcgagagcaagaaaggcaagaagtactcgcgcctc
tcctgcctgcgccgccgccgccacgctcagaagggggacgaaagcgacctgagcgagggc
tttgactctgactccagcccgggctccaccaaggggagcgacgggtccgagagcggctcg
gagaagagtggtgaggaggccgaggcggcattcgatgtggagaccgactcggacatgaac
agccaggagtcccgctcggacctggaggacatggagggcgaggtggacgccgagggaggg
gggcagtcgcggagcatgaagaatggtgccagggaggccctggacgcggcagaaggcgag
ggcgggcagcccgcggacgtgcagagccccggcgtcgccaaagctgaggcagccctggag
cccgtcgccaacgggccgggctccttgggccccagcgacgccagcatagccagcaacctc
caggccatgtccacacagctcttccagaccaagcgctgcttccggctggctcccacgttc
agcaacgtcctcctcaagccgaactgcgagctgcctgccccgaaggaggatgcgggcgac
aagccctgtgtgaatggggacgtggagaaggccagcgcggctgccgagcaagatgacgtt
tctgagtcggaggagagcctctcgagcagcaaatcctgccggaatgagcgttccctccag
gagaggctggaaatccttgccagcgagggattgctgcccaccgtgaaggtgttcctggac
tggctgaggaccaacacggacctcatcatcatgtgtgcgcagagttctcagagtttatgg
aacagactttctgtccttctgaacctgcttccttccgctggagacctgcaggactccggg
ctgtttctctgcaccgaggtaaagagcatgctgccaggatgtgaccttccagacccgagc
ccctgcttgcttctccccgaagacgtggccctccgcaaccttcccccattaaagaacgca
cacaagaagtttaacttcgagcaggaccggcctgccctcacggaagtggaagagtccgtg
gtccgcatctgctgcatccggagcttcggccacttcatcacccacctgcaaggcagcatc
ctgcagttcaactccgaggtcgggatcttcatcagcatcgctccgtcggagcaggacggc
ctgctgcagcaggcgcaggcacagctccgcatggctgctgaggaagctcgccggaacagg
ctcatgagggacatggcccagctccggctgcagctggaggtgtcgcagctggagggcagc
ctccagcagcccagagcacagtgcgtgatgtccccctacctggtccccgatacccaggcc
ctctgccagcacctctgcaccatccggcagctggccgccagcgggaggttcatcgtcatc
atcccgcggacagtgattgatggcttagacttcctgaagaaggagaacgcaggtgcccga
gacagcatccgatacttggaggcagaatttaaaaagggaaacagatatattcgctgccag
aaagaggttgggaagagctttgaaaggcataagctgaagaggcaagacctagatgcttgg
aacctctgtaagatcctggacagctgcaaacagctgacggcctcccagggaggcggcgaa
gacgacaccaccgggatggtgaccataatcacgggcttccagctggaggacctcagtaaa
ctgtcggctcccatgcagtctgcaatccaggcagtaggcaatgccaacgttgaaataaaa
aacgtcctggaattctacaagcagtggaaggaaatgggctga
DBGET
integrated database retrieval system
