Varanus komodoensis (Komodo dragon): 123033109
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Entry
123033109 CDS
T07701
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123033109 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vko03041
]
123033109 (DDX5)
03009 Ribosome biogenesis [BR:
vko03009
]
123033109 (DDX5)
Enzymes [BR:
vko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123033109 (DDX5)
Spliceosome [BR:
vko03041
]
Complex A
U1 snRNP components
U1 related factors
123033109 (DDX5)
Complex B
123033109 (DDX5)
Ribosome biogenesis [BR:
vko03009
]
Eukaryotic type
Pre-60S particles
Helicases
123033109 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
123033109
NCBI-ProteinID:
XP_044305465
Ensembl:
ENSVKKG00000004007
UniProt:
A0A8D2KT81
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MPGYSSERDRGFGGPRFGGSRGGSLGGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VARRAMQEIEQYRASKEITVKGHNCPKPVMNFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYGRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSR
GDRRDRYSAGKRGGFGFRERENFERTYGAVGKRDFGAKTQNGGYGAQGFGNGNAFGNNFG
AAGMQGGFRAGTPAYQNGYDQQYGNNMANMHGAMNQQQYAYPATGGTAMIGYPMPANYTQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtattccagtgagagggaccgcgggtttggtggccctcgttttggaggaagt
agagggggatccttaggtgggaagaagtttggaaaccctggggaaaagcttacaaagaag
aaatggaatctagatgagctgcccaaatttgagaagaacttctaccaggaacatccagat
gttgccagacgtgctatgcaagagattgaacaatatagagcgagcaaagagatcacagtg
aaaggccataactgtccaaaaccagttatgaatttctatgaagctaactttcctgcaaat
gttatggaagtaatccagaggcagaattttactgaaccaactgcaattcaggctcaaggt
tggcctgttgccttgagtgggttggatatggttggcgttgcacaaactggatcaggaaaa
acattgtcttatttgttgcctgctatagtacatataaatcaccagccattcctagagcgt
ggagatgggcctatttgtctggtgctggcaccaactcgagaactggcgcaacaagtgcaa
caagtggctgcagaatatggcagggcctgccgcttgaagtctacatgtatttatggcggt
gctcccaagggaccacaaatacgtgatctggaaagaggtgtagaaatttgcattgcaaca
cctggtagactcatagattttttggaagctggaaaaaccaatctccggagatgcacatat
cttgttcttgatgaagctgacagaatgcttgatatgggatttgaacctcagatccgaaaa
attgtcgaacagattagaccggataggcagactctgatgtggagtgcaacatggcctaag
gaagttaggcagcttgcagaagacttcttaaaagaatacgtacacatcaacattggtgca
ctggaactaagtgcaaaccacaatattttgcagatagtggatgtatgccatgatgtagag
aaggatgataagcttattcggttgatggaagaaattatgagtgaaaaagaaaacaagact
attgtgtttgtggagaccaaaagaaggtgtgatgaccttactagaaaaatgaggagagat
gggtggccagcaatgggtattcatggtgataaaagtcagcaggagcgagactgggtttta
aatgaattcaaacacgggaaggctcctatcctgatcgctacagatgttgcctccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctctgaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttacacctaacaatataaagcaagtaagcgacctcatctctgtacttcgcgaagctaat
caggcaatcaaccccaaattgctccagttggttgaagacagaggttcaggtcgttcaaga
ggtgaccgacgtgacagatactctgcgggcaaaagaggtggatttggttttagagaaagg
gaaaactttgaaagaacctatggtgcagtgggcaagagagacttcggtgcaaaaactcag
aatggtggctatggtgctcaaggttttggtaacggaaatgcatttgggaacaactttgga
gcagctggcatgcagggtggatttagggctggcaccccagcttatcagaatggctatgac
cagcagtatggaaataacatggcaaacatgcacggtgcaatgaaccaacagcagtacgca
tatcctgcaactggtggtacggcaatgataggctatccaatgccagcaaattatacccaa
taa
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integrated database retrieval system
