Varanus komodoensis (Komodo dragon): 123033113
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Entry
123033113 CDS
T07701
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123033113 (HELZ)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
123033113 (HELZ)
3'-5' decay
Other 3'-5' decay factors
123033113 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
AAA_22
zf-CCCH_4
AAA_7
AAA_16
Bac_DnaA
AAA_5
MOV-10_Ig-like
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
123033113
NCBI-ProteinID:
XP_044305472
Ensembl:
ENSVKKG00000007788
LinkDB
All DBs
Position
Unknown
AA seq
1946 aa
AA seq
DB search
MADRRPEKSCEQACESLRQQDYEVAVKHCTEALFSLSQYPPTHFPDACQAEIDRIKIESL
LYRIASSLQLKNYGKADEDCRHVLGEGLDREGDTFRAVLCCMHLKGNLQVVSNVLSKSLM
GESLNGMVTKDLTRLKTLLIETEAAAGKVPSIYHAEELEEGSEDGWQFRPPPRGVTSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKESKQCLGSYMESLI
EKWMNSLSPEKVLSECLDGVRVEHNPELSLTVTTKKSQQMWTFALSCKPARMLYRVALLY
DAHRPHFSITAISAGDSATQVSQEVPENCQEWIGGKMAQNGLDHSVYKISIAFSTEIFGT
FRQTVVFDFGTEPVLMQRVMIDAASTEDLEYRMNARQQLLTTAKRWDSTSKTIVEFEPNE
TTELDKSLLIRYQIPLSADQLFTQSVLDKSLTKNNYQSRLHDLLYIEEIAQYKEVSKFNI
KVQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVT
KEKSVLTQGTKEKVYEAAIEEKTKEYIFLRISRECCEELNLRADCEMQVELQFQLNRLPL
CEMHYALDRIKDNSILFPDVSMIPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEHLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHDNESLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRQQHSSNASKSQQSPPKVKGHHHSQSD
HFQSDGIVQPNPSVLIGNPIRAYTPPPPPAPPPGPHPNLGKSPSPVQRIDPHTGTSILYV
PAVYGGNMVMSVPLPVPWTGYQSRFAVDPRVITHQAAMAYNVNLLQAHGRGSPIPYGLGH
HSPVSVGQQQQQQLQHSEKEQLEQNRNSKNDPGVGPEISKIRTPEKKPMEVKQVDLEANP
QNRSPESRSSTTFPSSKFHRKDNLNPRQLNLHLTPPHAQYAVPNRHFQHLSQIPRQPYPV
QQQQNLLSHQQNHLPEQQNQMHPQQSQIVQQHNHLNQQPQPSSQLSPAYQTGPNQSFFKN
PVPPRPHSPSVDGVISEQHPPSLLQEVSNPLRPIAQHNPMMPSHLNHFVEENPPGMPTGE
PLDRIHGNLALETLRQQQARLQQWNEHNAYLSQGNIPYSHHHHHHPHLTHLSQQPIGLHQ
QPVRANWKLASNVEEEPEATYSRFQDFLRELSHREQNESRDLVEMPPPQSRLLQYRQVQP
RSPPALPSPSCSSNHSGHFPNFENRNIEISNNPAFQQHLPQMYNPPFSMPSEHIAAPSLK
YLQSDGSWTYANIHQSHLMGQGFHYGIPPLPHRSQQNPFIQIQNHQHMVGQEPFHPLTSR
AVSASSLHSLEEYEPRGPGRPLYQRRISSSSAQACSEDVNAPQDSLGQCKELQDHSNPSS
FNYSPPELWVNTTSSAPYQNIPCNGSNRAGQPRELLVPAKTVKPQEEQMKAESIQMSNSF
NYNMLQHLGQFPPLMPNKQIVESHSNSQLSTGVNKPAMSYASALRAPPKPKPAPEQAKKN
SDPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatcactcagacagcag
gattatgaagtggctgtgaagcactgcacggaggcccttttttccctcagccagtaccct
cccactcacttcccagacgcatgccaggctgaaatcgaccgcatcaaaattgagagcctt
ctctatagaatcgcttcttctttgcaacttaaaaactatgggaaagcagatgaggactgt
aggcatgtactgggagaaggactggacagggaaggtgacactttccgtgcagtgctttgc
tgcatgcatcttaaagggaatctacaggttgtatctaacgtgctttctaagtcactgatg
ggcgaatcactgaatgggatggtaactaaagatctgacaagactgaaaacacttctcatt
gaaacggaggcagcagctggtaaagttccctcaatataccatgcagaagagttggaagaa
ggatctgaggatggctggcaatttcgccccccacccaggggagttacaagtagtgaggag
tacacattatgcaaaagatttttagaacaaggaatctgcaggtatggtgcacagtgtact
tcggcacattcccaggaagagttaacagaatggcagaaaagatatgcatcccgcttgata
aggttaaaacagcagaaggaaagtaaacaatgtctgggaagttacatggaatccttgatt
gaaaaatggatgaattctttatctcctgagaaagtgcttagtgaatgcctagatggtgtg
agagttgagcataaccctgaactgtcacttactgtcaccaccaaaaaatcacaacagatg
tggacatttgctctctcatgtaagcctgcaagaatgttgtatcgagtggcgctgctttac
gatgctcatcgtccccatttcagtatcacggcaatatctgctggagatagtgctacccag
gtatcacaagaagtcccagaaaactgccaggaatggataggaggaaagatggcgcagaat
ggattagaccactctgtgtacaaaatcagcatagcctttagcacagaaatctttgggacg
tttcgccaaactgtggtgtttgattttgggactgagccggttttgatgcaacgagtaatg
attgatgctgcttccacagaagatcttgaatatcgaatgaatgcacggcaacaactgtta
actacagccaagcgttgggattccacttctaagacgattgtagaatttgagccaaatgag
actactgaattggataagagccttctgatcagataccaaattccgctgtctgctgaccag
ctatttacacagtcagtcttggacaaatcattgaccaagaataactatcagtcacgattg
catgacctcctttatattgaagaaatagcacaatataaagaagtcagcaagttcaacata
aaagtgcaattgcagattgtagcaagcttcatgctcaccggtgtttctggaggtgcaaaa
tatgcccaaaatggacagctttttggacgatttaagctcacagaaacgctttctgaggac
actttggcagggcgactggtgatgaccaaagtcaatgctgtttatttattgccagtcact
aaagagaagtcagtacttacccaaggaaccaaagagaaggtctatgaagcagctattgag
gaaaaaacaaaggagtatatctttttgagaatatccagggaatgctgtgaagaacttaat
cttcgagcagattgtgaaatgcaggttgaacttcagtttcagttaaaccgcttacccctc
tgtgaaatgcattatgccttggacagaatcaaggacaacagtattctctttccagatgtc
agcatgattcccacaataccttggagtcccaacagacagtgggatgagcaattggatcct
aggctcaatgcaaagcagaaagaggctgttctggctatcacaactccactttcaatacag
ttgcctcctgtgcttatcatcggtccctatgggacaggcaaaaccttcactttggctcag
gcagtcaagcacatactccaacagcaggatactagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaatcgctgggtaaaaactgtccaccca
gttgtgcatcagtactgtttgatttcaagcacacattccacctttcagatgccacaaaaa
gaagacattcttaaacaacgagtagtagtagttactttgaatacatcacaatatctatgt
caactggatcttgaacctggtttttttacacatattctgttagatgaagctgcacaagca
atggagtgtgagacgatcatgcctctagcactagcaaataaaaatacaagaattgtcttg
gctggagaccatatgcaacttagtccttttgtctatagtgaatttgccagagaaagaaat
cttcatgtttcattactggatcgactctatgaacattaccctgcagaatttccatgcagg
atcttactgtgtgagaactatcgctcccatgaagctatcatcaactatacttctgaactt
ttctatgagggcaagttgatggcaagtggaaaacagccagcacacaaagatttctaccct
ctgactttcttcacagcacgaggagaagatgtgcaagaaaaaaacagtactgctttttac
aacaatgcagaggtgtttgaagtagtggaacgtgttgaagaactgaggagaaagtggcca
gtcgcctggggaaaattggatgatggcagcataggtgtggtaacaccatatgctgatcaa
gtgttccgaattcgagcagagcttcggaaaaaaagattgtctgatgtcagtgttgagaga
gtgctaaatgttcagggaaaacagtttcgagtgttgtttctcagcacagtacgaacacgg
catacatgcaaacacaagcaaacacctataaaacggaaggaacatttattggaagattca
acagaagacttggattatggttttctgtccaattacaagcttctcaacacagctattaca
agagcccagtccctagtagctgtcgtgggagaccctattgctttatgttccattggaaga
tgcaggaaattttgggaaaggtttattgccttatgtcatgataatgaaagtcttcatggt
atcacgtttgagcaaatcaaagctcagttagaagctttagaattaaagaaaacctatgtg
ttgaatccactggctcctgagtttattccacgggctctgcgacagcagcattcatcaaat
gccagtaaatcacagcagtctccaccaaaggtgaagggtcatcatcatagtcaaagtgac
cattttcagagtgatggaattgttcagcctaatccttccgtcttaattggaaatcctatc
agagcatatactcctccacctccacctgcaccacctcctgggcctcatcccaaccttggg
aaatctcctagtcctgttcaaagaattgatcctcacactgggacaagcattctttatgta
cctgctgtttacggaggaaatatggtcatgtctgtgcctttgccagtaccatggacaggg
tatcagagtaggttcgcagttgatcctcgagtcattactcatcaagcagccatggcatat
aatgtaaatctattacaagcacatgggcgtggatctcctatcccctatggtcttggacat
cattcaccagttagcgtaggacaacagcagcagcagcagcttcagcattcagagaaagag
caacttgaacaaaatcgaaacagcaaaaatgatcctggcgttggacctgaaatcagtaaa
attcggacacctgagaaaaagcctatggaagtcaaacaggttgacttagaagcaaatccc
caaaatagaagcccggaatcacgttccagcacaacttttcccagttctaaatttcaccgt
aaagataaccttaaccccaggcagctgaatcttcatctcacccctcctcatgctcagtat
gctgttcctaatcgccattttcagcacctgtctcaaattccaaggcagccatatcctgta
caacagcagcaaaacctcttaagtcatcaacaaaaccatttgcctgaacagcaaaaccaa
atgcatccacaacaaagccagatagtccagcagcataatcatttaaatcagcagccgcag
ccatcttcacagctttcccctgcctatcaaacaggccccaatcaatctttctttaaaaac
cctgtgccacccaggcctcattcccccagtgtagatggtgtgatttcagagcagcatcct
ccatctctcttacaagaggtcagtaaccccctgagacccattgcacagcacaacccaatg
atgccatcccacttgaaccacttcgtggaagagaatcctccagggatgcctacaggagaa
ccattagatcgtattcatggaaatttagctttggaaaccctaaggcaacagcaggcaaga
ttgcagcagtggaacgagcataacgcctatctcagtcagggcaatattccttactctcat
catcatcatcatcaccctcacttgacccacctttctcagcagccaattggtctgcatcaa
cagccagttagggcaaactggaaacttgccagcaatgtagaagaagaacctgaagcaaca
tattcgaggttccaggattttctccgagaactatcacatcgtgaacaaaatgaaagcagg
gacctagttgaaatgccaccacctcagtcaagacttttgcaatacagacaagttcagccc
agaagcccaccagcactcccctccccttcctgcagttcaaaccacagtggccattttcct
aactttgagaatagaaatattgaaatatccaacaacccagcatttcagcagcatttgcct
caaatgtacaatccccctttttcaatgccatcagaacacatagctgcaccttctttgaaa
tatctgcaatccgatggatcatggacctatgctaacatacaccagagtcatctaatgggg
caaggctttcattatggtatacctccattgcctcatagatcacagcagaacccttttata
caaatacaaaatcatcagcacatggttggtcaggaaccatttcaccccctcacatcacga
gcagtatctgcttcttcgctgcacagcttagaagagtatgaaccaagaggaccaggcagg
ccgttgtaccaaagaagaatttcatctagttcagcccaggcttgttctgaagatgtaaac
gctcctcaagatagccttggacagtgtaaagagcttcaggaccatagtaacccatcctct
ttcaattattcacccccagaattgtgggtaaataccacctcatcagccccatatcagaac
attccatgcaatggatccaatagagcaggccagccaagagagctgttggttccagcgaag
acggtcaaaccccaggaggaacagatgaaagctgaaagcatccagatgtccaattctttt
aattacaacatgctgcagcatcttggccagttcccgcccctcatgcccaacaagcagatt
gttgaatcccacagcaacagccagctgagcaccggggtgaacaagcctgccatgtcctac
gcaagtgctctgagggctccaccaaagcccaagcccgctcctgagcaggcaaaaaagaat
agtgaccctttgtctttgtttcaggaacttagtctaggtagttcatcaggtagcaatggc
ttttactcctattttaaataa
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integrated database retrieval system
