Varanus komodoensis (Komodo dragon): 123033605
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Entry
123033605 CDS
T07701
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
123033605 (COL17A1)
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Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
123033605
NCBI-ProteinID:
XP_044306234
LinkDB
All DBs
Position
Unknown
AA seq
1506 aa
AA seq
DB search
MDAVTKKNQRDGAEVTERFITETVTTRLTSLPPKGGGSSGLKSTAYSGGSGVEKRTYAHG
SSYVTASGNARMNSSSSYKQATSPCSTLPKSPGSTFERKTYATHHATYEGSSSANSSPEI
PRKDFGSSATRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLRGSRSASASPTRSSSN
TLPIPKKAVVETKMVTESTQSVSGTYDTTILNAALPPYMWSSTLPAGSSLGGYHNNMTQS
SSLINTAAHSTGSVFGVTNNLAPSNPSLNAGLSTSSTVFGVQNNLAPATLGVGNNVNTAS
TAYGVKKNTMQSSGVTSTGVSTSSTTAAATTGSQHDDFLRKDCKFLLLEKENVTPKKEME
LLIMTKDNGKVFSASSAGLSGGCYTEDTLKKDKQANAAYTGDSYLKSESNGGLKSVSTKD
KATYAEVRGDDGCGGAGAAPAWCPCASCCSWWKWLLGLLLAWLFLLGLLFGLIALAEEVR
RLRSRVENLESQGSFQYFNNEKDVQGGTYSRLEAGPNDLNEEKLWALMKYRLDKEINKGY
LQGQKGSPPCSGDMGPQGPKGEQGFPGIPGPPGPKGHPGPDGQKGSKGETGMEGPMGQRG
REGPQGPRGEPGIPGNAQKGERGPVGEPGPPGPPGIPGLKGVMGSPGPHGPPGPSGMQGF
RGEPGSPGVKGERGAAGAPGPKGDPGEKGSRGLTGEPGPRGLPGPPGEPGAKGPAGPPGP
DGSPGHRGEQGLKGIPGLRGPSGPPGDAGQPGLTGPQGPPGLPGNPGQPGPKGEPGAPGQ
VTSTDSGSTVTFRGPPGPPGAAGPPGPPGVPGPVGPAGLPGSQGPRGERGPPGETTIVET
VRPNSAAVEAMPNMQGRPGPPGPPGPPGASVQGPPGPRGPPGLPGPPGPPGRPGSFVPTS
ETFFAGPPGPPGPPGPKGDQGLPGPRGFTGEPGQPGLPGSSIQGSGVAVQGPPGLPGPPG
PKGDKGVPGAPGIPGGGKTGSRSSPGPPGPPGPPGPPGLGIGSMQEMQQYIAEYLQSDSI
GRYLIGPQGPPGPPGPPGISIGGESLDYTELARHVMAYISSSSMSSSFSTFSYEDLLTML
KREDVRSYLIGPQGPPGPPGPPGLGGADLSLLLDYDELTRRVISYMTSSGIGTGLPGPPG
PPGLPGPSYGDIETWLRASEFSGIVGPPGPPGPPGIPGISLSSLSAEDFSRYLQSIGYSS
LSGLPGPRGPPGPPGPPGFSGTGLIFDDSNDVLSDQFKSALIQYLISDDVRGIIRGPPGP
PGPPGPADANFMGTSYGESLNSDGSRGSSVSSALSYDSSLASRRSYSSSLGSNGEYGGSH
GADGSFGGSLGADGSFGGSLGADGSFGGSLGADGSFGGSLGADGSQIRSVGTGGSYSGSY
AGSLNYNELAARVSENIQSRGLLQDMLAYAVQGPPGPPGPPGIPGISRVFAAYGNVTADL
MDFFRTYGTIPGPPGQKGEMGFPGPKGDTGPMGPPGRQGPRGPRGEKGEKGEPAYVSRRK
RRSLGV
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgtaacgaagaaaaatcagcgggatggagcagaagtcactgagagatttatt
acagaaactgttaccaccaggctgacgtctcttcctccaaaaggaggaggtagcagtggg
ctgaaatcaacagcttatagcggagggagcggagtggaaaagaggacatacgcacatggc
agcagttatgtcacagcgagtggaaatgctagaatgaattcctcttcctcctacaagcaa
gccacctctccttgttctactcttcccaaatcacctggctcaacctttgaacgaaaaacc
tatgccacccaccatgcaacatatgaagggagctccagtgcaaattcatctccggagatt
ccaagaaaagattttggttcctctgctaccagggggagaagccaaacccgagagagtgaa
atccgagtgaggctgcagagtgcttctccatcaaccaggtggacagaactagatgatgtt
aagcgactgcttcgaggaagtcggtctgctagtgccagcccaacacggtcttcatccaac
actctccctatacctaagaaagctgttgtggaaaccaagatggtgacagagagcactcag
tcagtgtcagggacgtacgacacaaccatcttgaatgctgccctcccaccgtacatgtgg
tcctccaccctgcctgcagggtcatctctcggcggctaccacaacaacatgacccaaagt
tcatctttgatcaacacagcagcccactctactggatcagtgttcggagttacaaacaac
ttggcacccagcaaccccagtctcaatgctggtctcagtacttcttctacagtatttggg
gttcaaaacaacctggccccagctactcttggtgttggcaacaatgtaaacacagcctct
acagcatatggagtaaagaaaaatactatgcagagctctggtgtgaccagcactggagtg
tctacctcatctacaactgcagccgccaccacaggatctcagcatgatgacttcctgcgc
aaagactgcaagttcctgctcctagagaaagagaatgtcactcccaaaaaagagatggag
ctgttgatcatgaccaaggacaatgggaaagttttcagtgcatccagcgctgggctcagc
ggaggctgttatactgaagacaccctaaagaaagacaagcaggccaatgctgcttatact
ggagattcctacctgaaatcagaatcaaacggaggactaaaatctgtttctacaaaggac
aaagccacctatgcagaagttcgaggtgatgatggatgtggtggggcaggtgcggcccca
gcctggtgtccttgtgcttcctgttgtagctggtggaagtggcttctaggtttgctcctg
gcctggctgttcctccttggcctactgtttgggcttattgcactggcggaggaagtgagg
aggctaagatcccgtgtggagaaccttgaatcccaaggcagcttccagtactttaacaat
gagaaagatgtccaaggggggacatatagcagacttgaagcaggaccaaatgatctgaat
gaagagaagctgtgggcgttaatgaagtacaggctagataaggagataaataaaggttat
ttgcaaggacaaaaaggtagtcccccctgctcaggtgatatgggcccacaaggaccaaag
ggagagcaagggttccctggcataccaggtcctccaggtccgaaaggtcaccctggacct
gatggacagaagggcagcaagggtgaaactggcatggagggtcccatggggcaaagaggg
cgtgagggaccgcaaggacctcgtggggagcctgggatacctggaaatgcacagaaaggt
gaaagaggtcctgttggagaaccaggacctccaggcccaccaggtatcccgggtcttaaa
ggtgtgatgggttctccaggtccccatggtcctcctggtccttctggaatgcaaggattc
agaggtgaaccaggtagcccaggtgttaaaggtgaaaggggagccgcaggagcacctgga
cccaaaggtgatccaggagagaaaggatctaggggtcttacaggtgagccaggtcccaga
ggactgcctgggcctccaggtgaaccaggagctaaaggacctgcaggtcctcctggccca
gatggaagcccaggccacagaggtgagcagggtcttaagggaataccaggcctacgagga
ccatctggacctcctggagatgcagggcagccaggtctcacaggaccacaaggcccacca
gggctcccaggcaatccaggccaaccaggacctaaaggtgaacctggagcaccaggccaa
gttacttccacagatagtggatcaacagttactttccgtggacctccaggcccaccagga
gctgctggacctccaggcccacctggtgtcccaggtcctgttggcccagctggtcttcct
ggatctcaaggtcctcggggtgagagaggtcccccaggtgaaactaccattgtggaaact
gtcagaccaaacagtgctgctgttgaagctatgccaaatatgcaaggaaggccaggacct
ccaggacccccaggtccaccaggtgcttctgttcagggcccaccaggaccccgtggccca
ccaggcctacctggtcccccaggcccaccaggaagacccggatcctttgtacccacatca
gagactttctttgctggtccaccaggtccacctggtcctccaggtccaaagggagatcaa
ggcttgccgggcccacgaggattcacaggtgaaccaggccagccaggtctcccaggatct
tctatacaaggttccggagttgccgtccaagggccacctgggcttcctgggccacctgga
cccaaaggagacaaaggtgttccaggcgcccctggcatcccaggaggaggtaagactgga
tcaagaagttctccgggtcctccaggtcccccaggccctcctggacctccaggcctagga
attggctcaatgcaagagatgcagcagtacatagctgagtacctgcagagtgactccatt
gggcgttatctgattggaccacaaggcccacctggccctccagggcctccaggaatctcc
attggtggtgaatctttggactacactgaactggctcgccatgtcatggcctacatatcc
agttcctccatgtctagctctttctccacattttcttatgaagatcttcttaccatgctg
aagagagaagacgttcgttcatatctcattggacctcagggtcccccaggtccccctggg
ccacctggactgggaggagctgacttatctctgttgttggactatgatgagttgacaaga
cgagttatcagctatatgacaagttcaggtattggcactgggcttccgggtcctccaggt
cctccaggtttgcctggaccatcttatggagatatcgaaacttggctccgagcctcagaa
ttcagtggcattgttggaccacctggacccccaggtccaccaggaattcccggcatctct
ctttcctccctcagtgcagaagacttctcccgatatctgcaaagtattggatactcatca
ctttcaggactaccaggaccacgaggaccaccaggccctccaggaccacctggcttttca
ggaacaggccttattttcgatgatagcaatgatgttttgagtgaccagttcaagagtgcc
ttgatccagtaccttatcagtgatgatgtgcgtggcatcatcagaggacctcctgggcct
ccaggaccacctggcccagcagatgccaacttcatgggtacatcttatggagaatcccta
aattcagatggatcacgtggcagttccgtgagttctgccctatcctatgattcatcacta
gcctcaagaagatcatacagcagttcattgggaagcaatggagaatatggtgggtcacat
ggagcagatggatcttttggcggatcgcttggagcagatggatcttttggcggatcactt
ggagcagatggatcttttgggggatcgcttggagcagatggatcttttggcggatcgctt
ggagcagatggatcacagataagatcagtgggtacaggaggatcctacagtggttcatat
gctggctcactgaattacaatgagctagcagccagagtatcagagaatatacagagtcga
gggctccttcaggacatgttagcatatgctgtgcaaggacctccagggcccccagggcct
cctggcatcccaggcatcagcagggtgtttgcagcctatggcaatgtcactgcagacctc
atggatttcttcagaacttatggaactattccaggaccacctggacagaaaggagagatg
ggattcccaggacccaaaggtgatactggaccaatgggccccccaggccgccaaggccca
agaggaccaaggggtgaaaagggtgagaaaggtgagccagcatatgtcagtcgaagaaaa
aggagaagcctgggcgtctag
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integrated database retrieval system