Varanus komodoensis (Komodo dragon): 123034845
Help
Entry
123034845 CDS
T07701
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03440
Homologous recombination
vko03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123034845 (PALB2)
03460 Fanconi anemia pathway
123034845 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vko03400
]
123034845 (PALB2)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
123034845 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
123034845 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
DUF7059
Motif
Other DBs
NCBI-GeneID:
123034845
NCBI-ProteinID:
XP_044308480
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MDSDVPKTVAEQNLPRRQEITEEGSISQTSPESLKYAPASICAENTLETAPVILEPEVTG
QECSLPKNSGFKSNSGHVSQKGLCSLAGPVLEQNQLLSKTKTKTCTKPTETEREFVCEAL
QRTPGFQLEHSMESVKTPGSPVFKRRSFILETERSIPKVAVASFEGRGSNASFAMPSEEP
DEETVFPEVSHPCAYVRVFSEEGIIAAFEDVTAENALSPTDTWNEGKESAQKVDEQTEMG
REEPGRSEDLAGTREASQGGRAAPCMRRDEMQEERSQHKEAWNSDLIKRGSSTNKPGDKD
SGEHLNPAAPAKTTLGSCTVVEGLLFPVEYYVRTTRQLSNCQREVNLEAVIQSQLGKRRK
RRRTVPKEKNAKLAFPSREHVVSDELLGAVSFSTPGADGTSDTWHSLSQESTASVTGFSP
SEGLLQWRKGQLRAGSNHRASSCTSHKTTVSKAQGKKKNCQGKGRAVALPARTGGHVGAQ
QSGSKRLGESVAECPGAASEAAQNAPADLVTASACSSPRGPQESCEACPESEPLGPAGDW
DHTNARLGPAVQAALPRGELLAASLGGADGGPPHGGRVSSLHGEPEDPSQGLLKTSSAAL
HLRSRKTSDPKWLPPSMNPQGFHLPKDEFGCLKAEKLKLCAVKPLETFHADGPANCLHGV
GELFAEGGNRGLLPGVKEPVMPPPPPLPQCLQMKGLPSSKLLLPPALEDVSSLLESQPPT
PVFPTVGPTPASQASLHSEALLDAYPLQVNADTAGGLGSPADASLPRNSITKSWPQDQSG
SWKPEEKRVSLAEAPVPAGESIEPSSKQSEMVSEDVEQALEHSWERQSLQLTSRLKSPCG
TVDVSTVWWAGADGTELRVVTACETSVSLWRLLHAGRWEAACTWHFAQVPVTQIVPLPDV
HNRVCVALGGLEVAEIRFLFHFAQDDSVGQWLVQAGNIKAVLGLKNRRLVSSCGWLQDQT
VAVMSFSETGRSNERWALMSPEETILSFAEVEGMEEALVGMTTLNHVVIWNLRTGQLLRK
MSIGYSGPACVCHKAYSSLGLLFVILSHPRAKENETCGNPAFQIIALNPKTAKNTGVLFL
SLPPGIRGRYLEGGVRNTLAAAVLTSGTIAVWDLFLGQCTALLPPNPEGSWSLAKWSIAD
TCLLAGRKDGSVYIYSYTVCLSST
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgatgtcccgaaaaccgttgcagagcaaaacctgccgcgtaggcaagagata
accgaagaaggatccattagccagacgtccccagagtccttgaagtatgccccagctagt
atttgtgcggagaacactctagaaacggcacctgtcatcttggagcctgaagttaccggc
caggaatgtagtttgccaaaaaactctggcttcaaatcaaactccggccatgtttctcaa
aagggtctctgtagtcttgcagggcctgttcttgagcaaaatcagcttttgtcaaaaaca
aaaaccaaaacatgcacgaaaccaacagagacagagagagaatttgtgtgtgaggcactt
cagagaactcctggattccagttggagcatagtatggaaagtgtgaagacccccggctca
ccagtctttaagcgaaggagcttcattttggaaactgagcgtagcatcccaaaagtcgca
gtggcctcttttgaaggaagaggtagtaatgcttcttttgccatgccttcagaggaacca
gatgaggaaaccgtctttcctgaagtatcccatccgtgcgcttatgttcgggtgttttct
gaggaaggcatcattgctgcttttgaagatgtgactgctgagaatgctttgtcacccaca
gacacatggaatgaggggaaagaatctgcccagaaggtagatgaacaaacagagatgggt
agagaagagccaggtaggagtgaagatttagcagggaccagggaagcttcccaggggggc
agagctgccccttgtatgcgcagggatgaaatgcaggaagagagaagtcagcacaaggaa
gcttggaactcagacctcattaaaagaggctcttccaccaacaaaccaggtgacaaggat
tcaggggaacatcttaatcctgctgcacctgctaagaccacactaggctcttgcacagta
gttgaaggactccttttccctgttgagtattacgtaaggacaacgcggcaactatctaac
tgccagagggaggtgaacttggaggcagtcattcagagccagctgggaaagagaaggaaa
agacggagaactgtgcctaaggagaagaatgcgaagcttgccttcccctcccgagaacac
gtggtaagcgatgagctgctgggggctgtttctttctcaacccctggggctgacgggacc
tctgatacttggcattctctgtctcaggagagcactgcttcagtcacgggcttctctccg
agtgaggggctcctgcagtggagaaaaggacagctgagagcggggtctaatcacagggcc
tcatcctgcacgtcacacaagacaacagtttccaaggcacaaggaaagaaaaagaactgc
caaggcaaaggcagagcagtggcgctccctgccaggaccggtggccacgtgggagctcag
cagagtggcagcaagaggctaggggagtctgtggctgaatgccccggggctgcctcagaa
gctgcccagaatgcccctgcagacctggtgactgcatcagcttgcagctctccgagaggc
ccgcaagagagctgcgaggcgtgtcctgagagcgagcctcttgggccggctggggactgg
gaccacaccaacgccaggctgggaccagcggtgcaggcagcgttgcctcggggcgagctg
ctggcggcttccctgggaggtgcagatggcgggccgcctcacggtggaagagtgagcagc
ctgcatggagaacctgaagatccttcccagggtctccttaagacctcctcggctgccttg
catctccggagtcgtaagacatctgaccccaagtggctgcctcccagcatgaatccccag
ggattccatttacccaaagatgaatttggctgccttaaggcagaaaaactcaagctgtgt
gctgtgaaaccgctggagacttttcatgctgatggaccagccaactgcctccacggcgtg
ggtgagctgtttgcagagggaggaaatcggggtctccttccaggcgtgaaagaaccagtg
atgccgccgccgccgccgcttccgcagtgcttgcagatgaaggggcttccatcgagcaag
ctgctcctgccacccgctctagaggatgtgagcagcctgctggaatcccagccgcccacc
cccgttttccccactgtggggccaacccctgcctcccaggcttcgctgcacagtgaggcc
ctgctagatgcatatcctttgcaagtgaacgcggacaccgcgggtggactgggcagccct
gcggatgcttctttgccaagaaacagcatcacaaagtcgtggccacaagatcagagtgga
tcctggaagcctgaagagaaacgtgtgagccttgcggaagcacctgtcccagctggcgag
tccattgagccatctagtaaacagagtgaaatggtgtcagaagatgtggaacaggccctg
gagcacagctgggaaagacagagcttgcagttgacctccagactcaagagcccctgtggc
accgtggacgtgagcaccgtgtggtgggcgggcgccgatggcacggagctgcgtgtcgtg
actgcgtgcgagacgtccgtttccctctggaggctcctgcatgccggtcgctgggaggcg
gcgtgcacgtggcactttgcgcaggttccggtcactcagattgttcccctcccagacgtc
cacaaccgtgtgtgcgtggcattgggaggcctggaggtcgcagagattcggttcttgttt
cattttgctcaagatgactctgttggacaatggttggtccaagctgggaatataaaagct
gttcttggactgaaaaacaggcggctggtcagcagctgtggctggcttcaggaccaaacc
gtggcggtcatgtctttctccgagacaggaagaagcaatgagcgatgggctttgatgtcg
cccgaagagaccattttgtcttttgctgaagtggaagggatggaggaagctttggtgggc
atgacaactctgaaccatgtggtcatctggaacttgaggactgggcagctgttgaggaag
atgtctattggttattctggccctgcatgcgtctgccacaaggcctactccagcctgggt
ctcttgtttgtgattttaagtcacccacgcgccaaggagaatgagacatgtggaaatcct
gctttccagatcattgcactcaatcctaaaacagccaagaacactggagttctgttcttg
tccctcccgccagggatcagaggaaggtacttggaaggcggagtgaggaacacccttgca
gcggctgtgctgacatcgggaaccattgccgtgtgggatttatttctgggccagtgcaca
gccctgctgcctcctaaccctgagggaagctggtcccttgccaagtggtcaattgcagac
acttgcctgctggctgggcgaaaagatggcagcgtttacatctacagttacacagtgtgc
ctgtcttctacttga
DBGET
integrated database retrieval system
