Varanus komodoensis (Komodo dragon): 123035460
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Entry
123035460 CDS
T07701
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123035460 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vko03019
]
123035460 (XAB2)
03041 Spliceosome [BR:
vko03041
]
123035460 (XAB2)
Messenger RNA biogenesis [BR:
vko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123035460 (XAB2)
Spliceosome [BR:
vko03041
]
Complex B
Other components
Prp19-related factors
123035460 (XAB2)
Complex C
123035460 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_2
Suf
TPR_12
TPR_19
TPR_8
ARM_TT21
ARM_TT21_C
TPR_15
TPR_16
RPN7
NRDE-2
TPR_1
CKAP2_C
LTN1_E3_ligase_6th
ATG1-like_MIT2
Motif
Other DBs
NCBI-GeneID:
123035460
NCBI-ProteinID:
XP_044309614
Ensembl:
ENSVKKG00000002410
UniProt:
A0A8D2IWG8
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MPELETVLGKRELFFEEEDLQYEEEILRNPFSVKCWIRYIEFKQNAPKHILNLIYERALK
ELPGSYKLWYNYLKQRRKQVKSKCVTDPSYEEVNNCHERALVFMHKMPRIWLDYCQFLMD
QCRITRTRRTFDRALRALPITQHHRIWPLYLRFVRLYPLPETAVRVYRRYLKLSPENAEE
YIEYLRSIDRLDEAAVRLAAVVNDERFVSKEGKSNYQLWHELCDLISQNPDKVKSLDVGA
IIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVMTVRDFTQVFDSYAQF
EESMIAAKMETTSEMGREEDDDVDLELRLARFEQLITRRPLLLNSVLLRQNPHNVHEWHK
RVKLYEGKPREIINTYTEAVQTVDPFKATGKTHTLWVSFAKFYEVNGQIEDARTIFEKAT
KVNFKQVDELASVWCEYGEMELRHENYDQALRILRKATAIPAKKAEYFDSSEPVQNRVYK
SLKVWSMLADLEESLGTFSSTKAVYDRILDLRIATPQIIINYGLFLEEHNYFEESFKAYE
RGISLFKWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPQKYAKTIYLLYAKL
EEEYGLARHAMAVYERATQAVQPSEQYDMYNIYIKRAAEIYGVTHTRSIYEKAIEVLSDE
HAREMCLRFADMECKLGEIDRARAIYSYCSQISDPRTTANFWQTWKEFEIRHGNEDTIRE
MLRIKRSVQATYNTQVNFMASQMLKVYSNATGTVSDLAPGQSGMDDMKLLEQRAEQLAAE
AERDQPRPKEKILFVRSDASRSELAELSKQANPDEIDIDLDDGDESEDNEPDEVQLEQKI
IPSAVFGGLKDD
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctggagacggtgttggggaagcgggagctcttcttcgaggaagaagacctg
cagtatgaggaagagatcttgcgcaatcccttctctgtcaaatgctggatccgttacatt
gagttcaagcagaatgctcccaaacatatcctgaacctgatctatgagagagctcttaag
gaattgccaggcagctacaagctgtggtataattatctgaagcagcggcggaaacaggtg
aaaagcaaatgtgtgacagatccaagctatgaagaggtgaacaactgccacgagcgtgcc
cttgtcttcatgcataagatgcctcggatatggctcgattactgccagtttctcatggac
cagtgtcggatcacccgtacacgcaggacatttgaccgggcacttcgggccctgccgatc
acacagcaccatcgtatatggccactgtacctcaggtttgtgcgcttgtatcccttacct
gagacagctgtacgggtctaccgtagatacctaaagctgagcccagagaatgcagaggaa
tacattgagtacctgcgctccattgaccgcctggatgaggctgctgtccggcttgccgct
gtagtgaatgatgaacgtttcgtctccaaagaaggcaaatccaactatcagctgtggcat
gagctttgtgacctcatctcgcagaatccagataaagtgaagtctcttgacgtgggtgcc
atcatccggggtggcctgacccgcttcactgaccagctgggcaagctgtggtgttccttg
gcagattactacatccgcagtggtcattttgagaaggctcgcgatgtgtatgaagaagcg
atacaaacggtgatgaccgtgcgggatttcactcaggtgtttgacagctatgcccagttt
gaggagagcatgattgctgcaaagatggagaccacctctgagatgggacgtgaggaggac
gatgacgtggacctggaactgcgcctggcgcgctttgagcaactgatcacacgccggccc
ctgcttctcaacagcgtcctccttcgccagaatccccacaacgtccatgagtggcataag
cgggtgaagctgtacgaagggaaaccgcgggagatcatcaacacatacacggaagcagtg
cagactgtcgacccgtttaaagccaccggaaagacccatacgctgtgggtttcttttgcc
aagttctacgaggtcaacggacagatagaagatgcaagaaccatttttgaaaaagccacc
aaggtgaacttcaaacaagtggatgagctggccagcgtgtggtgcgagtatggcgagatg
gagttgcgacatgagaactacgaccaagcactgcgcatcctgcggaaagccacagccatc
ccagctaagaaggccgagtattttgattcctcagagcctgtgcagaaccgtgtatacaag
tccctcaaggtttggtccatgttggctgacctggaagaaagtctgggcactttcagctct
actaaggctgtatatgaccgcattctggacctgcgcattgccacccctcagatcatcatt
aattatggtctcttcctggaagaacacaactacttcgaggagagcttcaaggcatatgag
agggggatctcgctgttcaagtggcccaatgtgtatgacatctggaatacctacctgacc
aaattcatagatcgttatggtgggaagaagttggagcgtgctcgggacctctttgaacag
gctctggatggctgtccccagaaatatgccaagaccatctatctgctgtatgccaaactg
gaggaggagtatgggctggcccgccatgccatggccgtgtatgagcgagccacccaggct
gtgcagccgtcagagcagtacgacatgtacaacatctacatcaagagagcagctgaaatc
tatggggtgacccacacccgtagcatctatgagaaagctattgaggtgctgtccgatgaa
catgctcgggagatgtgcctgcgctttgctgacatggagtgcaaactgggtgaaatagat
cgagctcgggctatctattcctactgttcacagataagtgacccccgtactaccgctaac
ttctggcagacatggaaggaatttgagatccggcatgggaatgaggacacaattcgggag
atgctgcgcattaagcgaagcgtgcaggctacctacaatacccaggtcaatttcatggct
tcccagatgttgaaggtttacagtaatgccacaggcacagtgtctgacttggcgcctggc
cagagtggcatggatgacatgaagctgttagagcagcgggcagagcagctggcggctgaa
gcagagagagatcagcccagacctaaggagaagatcctgtttgtcaggagcgatgcttcc
cgcagcgagctggctgaactttccaaacaggccaaccctgatgaaatcgacattgatttg
gatgatggggatgagagtgaggacaatgagcctgacgaggtacagctggagcagaaaatc
atcccttctgctgtgtttgggggccttaaggatgactga
DBGET
integrated database retrieval system
