Varanus komodoensis (Komodo dragon): 123035754
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Entry
123035754 CDS
T07701
Name
(RefSeq) DNA repair protein RAD50-like isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03440
Homologous recombination
vko03450
Non-homologous end-joining
vko04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123035754
03450 Non-homologous end-joining
123035754
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
123035754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vko03032
]
123035754
03400 DNA repair and recombination proteins [BR:
vko03400
]
123035754
DNA replication proteins [BR:
vko03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123035754
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123035754
BRCA1-C complex
123035754
NHEJ (non-homologous end-joining)
MRX complex
123035754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SMC_N
AAA_15
AAA_29
AAA_24
MdcE
HTH_12
zf-met
AAA_16
AAA_13
Motif
Other DBs
NCBI-GeneID:
123035754
NCBI-ProteinID:
XP_044310201
Ensembl:
ENSVKKG00000011937
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQVITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISALGVSRSVINNVIFCHQEESNWPLSEGKALKQRFDEIF
SATRYIKALETLRQVRLKQGQRIKECQVELKYLKQNKEKAHEIQNQLANRETQLAASREN
VKSIEDQLEPLRNHLTEIEQNLVKVMRLDNEIKALESRKKQMEKDNQDLQQKMEKVFQGT
DEQLREMYQNHQRTVREKEKKLTEFQRELERTNKDCLRFNREKSELLVEQGRLQLQADRH
QQHIRTRDSLIQSLAAQLELEGLERPPFNERQINNFHRLVKERQDKDMEAANQLMREFSE
KELMKQKQLDEIRDKKTGLERTIDLKSDIQNKKQLEVKNLKYELHQLEGSSDRLLELDQE
LTKAKHELDEAEKNCNVEGLEMEIQELQREKATLDSFLRKLDKEMEQLNLNTTIITQMDM
LKKDKADKEEQIRKIKSRHNEELITLMGYFPNKKQLEDWLHSKVKEINETRDKIAKLNKE
LVSAEQNKNHISTELRKKEEQMSSYEEKLFDVCGSQDFESDLYKLQDEIEKTSKKRAMLA
GATAVYSQFITQLTDEKESCCPVCQRVFQSEAELQEVIDDLQAKLRRAPDTLKTTEAELK
RREKKRDEMMSLKPVRQMVTELQEKDIPDLRNKLQNLNRDIQRLKSDIEEQETLLGTIMP
EEESAKACLQDITFMERYQTDLRDVERKIAQQATKLQGVDLGRTLLQVSQEKQERKHQWD
TVAGKIELKQTLKQDQQNQIQHLKSTINELNTEKLQISCRMQRRQQLEEQTVELTTEVQC
LNREIKEAKEQIFPLETTLERLQQEKEELMDKKNTSNKVTQEKISDIKEKVKNIHNYVKE
IENYIQEGKEEYKQQKECELDEVKAQLAESEKKKEKINKEMGTIRQDIDTQKIQERWLED
NLTLRKRNEDLKEVEESIRQHLREMGEMQVPQLKRHSCFSGGQCT
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagattgagaaaatgagcattcttggtgtgaggagttttggggtagaagacaaa
gacaagcaagtgatcactttctttagtcctttaacaatcttggttggtccaaatggtgct
ggaaaaacgacaatcatagaatgtctgaagtacatttgcactggggatttcccacctggc
accaaaggaaattcatttgtccatgatccaaaagttgccaatgaaacagatgtcagagct
caaattcgacttcagtttcgtgatgttaatggagagcttgtagctgtccagcgatctatg
gtgtgtactcagaaaggaaagaaaacagaatttaaaactcttgaaggagtcattaccaga
acaaaacatggagagaaggtcagcctaagttccaaatgtgcagaaattgaccgtgagatg
attagtgcccttggcgtttccaggtctgtgattaataatgtcattttctgtcatcaagaa
gaatccaactggcctctaagtgaaggaaaggctctgaaacaaagatttgatgagatcttt
tcagcaacaaggtacattaaggctttagaaacacttcgtcaggtacgtctgaagcaagga
caacgaattaaagagtgccaggtcgagctgaagtacttgaaacagaataaagaaaaagcg
catgagattcagaatcaacttgccaatagggaaactcagttggctgcctccagggaaaat
gttaaatctattgaggaccagcttgaacctctaaggaatcatctaacagaaatagaacag
aatcttgtaaaagtaatgagacttgacaatgaaattaaagctctggaaagtcgaaaaaaa
cagatggagaaggataaccaagatttgcaacaaaaaatggagaaggtttttcaaggaact
gatgagcagcttagagaaatgtatcaaaaccatcagagaactgtgagagaaaaggagaag
aagttaacagaatttcaaagagagctggagagaacaaacaaagattgcctaagattcaac
agagaaaaatctgaactattggttgaacaaggtcgcctccagttgcaagcagatcgtcat
cagcaacatataagaaccagggattcattaattcagtcactggcagcacagttggaactg
gagggattagaaagaccacctttcaatgaacggcaaattaacaattttcaccgccttgtg
aaagagagacaggacaaggacatggaagctgctaatcagctgatgagagaatttagcgag
aaggaactaatgaagcagaaacaactagatgaaataagagataaaaaaactggacttgaa
agaaccattgacctaaaatcagacattcaaaataagaaacagcttgaagtaaaaaacctg
aaatatgagttacatcagcttgaagggtcttcagataggctcttggaactggatcaggaa
cttaccaaagcaaaacatgaactagatgaagctgaaaagaattgcaacgttgaaggccta
gaaatggaaatacaagagctgcaaagagagaaagcaactttggacagttttcttcgtaaa
ttggataaagaaatggaacagctgaacttgaatactaccataattacccaaatggacatg
ctgaaaaaagataaagcagacaaagaagaacaaataagaaaaataaaatccagacacaac
gaagagttaattaccttgatgggatattttccaaacaaaaaacagcttgaagattggctt
cactctaaagttaaagaaattaatgagacacgagacaaaattgctaagctaaacaaagaa
cttgtttcagcagagcaaaacaaaaatcatattagcactgaattacgaaaaaaagaggaa
caaatgtccagttatgaggaaaaactttttgatgtttgtggaagccaggattttgaaagt
gatctctacaaacttcaagatgaaatagaaaaaacatccaagaagcgagccatgcttgct
ggtgccactgcagtttattcgcagttcatcacacaattaacagatgagaaagaatcatgt
tgtccagtttgtcagagagtcttccagtcagaggctgagctgcaggaagtaatagatgat
cttcaggctaagctgcgtcgtgctccagacacactgaagacaacagaggctgagctaaag
aggagagagaaaaaacgtgatgaaatgatgtcacttaaacctgtcaggcaaatggtaact
gaactccaggaaaaggacatacctgacttaaggaacaagctacagaatctcaacagagat
atccaacgccttaaaagtgatatagaagaacaggaaactcttttgggtactatcatgcct
gaggaagaaagtgccaaagcatgtttgcaagatattacatttatggaaagatatcagact
gatctaagggatgttgagcgaaaaattgcacagcaggctactaagctgcagggagtagat
ttaggtcgaactcttctacaagtgagccaggaaaagcaagagcgaaaacatcagtgggac
acggttgcaggcaaaattgaattgaagcagactcttaagcaagatcagcaaaatcaaatc
cagcatctgaagagtacaattaatgagctgaatacagagaaacttcagatttcttgtcgt
atgcaacgtcgacagcagctagaagagcaaactgtggagctgaccacagaggtgcagtgc
ttgaacagagagattaaggaagcaaaggagcagatatttcctttggaaacaactttggaa
agacttcaacaagagaaagaagagctaatggacaaaaagaacacgagtaacaaagtgaca
caagagaagataagcgacattaaagaaaaagttaaaaacatccataactatgtaaaagag
attgagaattacattcaagaagggaaagaggaatacaaacagcaaaaggaatgtgaactt
gatgaagtcaaggctcagctagcagaatctgagaaaaagaaagagaagataaataaagaa
atgggaacaatcaggcaagatattgatacccaaaagattcaggagcgatggttagaagat
aatcttactttgaggaaaagaaacgaagatctaaaagaggttgaagaaagcataaggcag
catttgagggagatgggcgaaatgcaagtcccgcaactgaaaagacattcctgtttctct
ggagggcagtgtacctag
DBGET
integrated database retrieval system
