KEGG   Varanus komodoensis (Komodo dragon): 123036038
Entry
123036038         CDS       T07701                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
vko  Varanus komodoensis (Komodo dragon)
Pathway
vko03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vko00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123036038 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vko03019]
    123036038 (RAE1)
   03036 Chromosome and associated proteins [BR:vko03036]
    123036038 (RAE1)
Messenger RNA biogenesis [BR:vko03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123036038 (RAE1)
Chromosome and associated proteins [BR:vko03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    123036038 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C ANAPC4_WD40 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st eIF2A Beta-prop_WDR41 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_ACSF4 WDR90_beta-prop_4th ExoI_SH3 WD40_MABP1-WDR62_2nd Beta-prop_Nup120_160 B-prop_COPA_B_2nd PepSY
Other DBs
NCBI-GeneID: 123036038
NCBI-ProteinID: XP_044310810
Ensembl: ENSVKKG00000013388
UniProt: A0A8D2Q4W4
LinkDB
Position
Unknown
AA seq 369 aa
MSLFGSTSSFGTGGTSMFGSTATDNHNPMKDIEVTSPPDDSIGCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHEAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRLPTPMMTLQLPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPAHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACSFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKKY
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttatttggatcaacatcatcatttggaactggtggaaccagcatgtttggcagc
acagctacagataaccacaacccgatgaaggatattgaagttacttcgccacctgatgat
agcattggttgtttggctttcagcccaccaacattgccgggtaatttccttattgcagga
tcatgggcaaatgatgttcgttgttgggaagtccaggataatggacagactattccaaaa
gcacagcagatgcacacaggacctgtactagatgtttgttggagtgatgatgggagtaaa
gtgttcacagcatcatgtgataaaactgccaaaatgtgggatcttaacagtaaccaggca
atacaaattgcacagcatgaagctcctgtcaagactatccattggatcaaagctccgaat
tatagctgtgtgatgactggaagttgggataaaactttaaagttttgggatacccgattg
cctactccaatgatgactctgcagttacctgagcgatgttactgtgccgatgtagtatat
cccatggctgttgtggctactgcagagagaggcttgatagtttatcagttagagaaccag
ccttctgaatttagaagaatagattctccacttaaacatcagcaccgctgcgtggctatt
tttaaagacaaagtgaacaaaccaacagggtttgcccttggaagcattgaaggaagagta
gccattcattacattaacccaccaaatcctgccaaagacaacttcaccttcaaatgtcat
cggtctaatggcacaaacacatctgctcctcaggatatctatgctgtaaatggaattgcc
tttcatcctgcccacggcactcttgcaactgtaggatctgatggtagattcagcttttgg
gataaagatgcacggacaaagctaaaaacatcagagcagctggaccagccaatatctgct
tgttctttcaaccataatggcaacatatttgcatatgcttccagttatgattggtcaaag
gggcatgagttctataatcctcaaaagaaaaactatatttttctgcgcaatgctgctgaa
gagttaaaacccagaaataagaagtattaa

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