Candidatus Vallotia laricis: GKR41_00159
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Entry
GKR41_00159 CDS
T07905
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
vla
Candidatus Vallotia laricis
Pathway
vla02024
Quorum sensing
vla03060
Protein export
vla03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GKR41_00159 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GKR41_00159 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GKR41_00159 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vla02044
]
GKR41_00159 (ffh)
Enzymes [BR:
vla01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
GKR41_00159 (ffh)
Secretion system [BR:
vla02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GKR41_00159 (ffh)
Eukaryotic Sec-SRP protein
GKR41_00159 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_16
AAA_31
AAA_14
AAA_30
cobW
Zeta_toxin
nSTAND3
NACHT
T2SSE
AAA_33
YqeC
AAA_24
AAA_18
ResIII
APS_kinase
AAA_5
Fer4_NifH
ATP_bind_1
ABC_tran
Mg_chelatase
AAA_19
AAA
MMR_HSR1
KTI12
MobB
Rad17
NTPase_1
Thymidylate_kin
DO-GTPase2
GTP_EFTU
G-alpha
DO-GTPase1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UDG82814
LinkDB
All DBs
Position
complement(192138..193505)
Genome browser
AA seq
455 aa
AA seq
DB search
MLDNLTQRMTRVIKTLRGEARLTESNTQEMLRMVRLALLEADVALPVVCEFVTKIREKAL
GEEVISSFTPGQMLVNIVQRELTALIGGHYDSKAAELHLAVIPPAVILIVGLQGSGKTTT
VGKLAKLLHEKQNKKVLTVSCDVYRPAAIAQLKIVTEQIGADFFPSQQDQNPLDIAQDAL
DWAKRHYYDVLLIDTAGRLGIDDRMMQEIAQLNAKLKPAEVLFVIDAMLGQDAINTAKSF
NDTLQLTGIVLTKLDGDSRGGAALSTRYITGQPIKFIGVGEKLEDLEIFYPERIANRILG
MGDILGLVEQAEQNVDIQSTHSLAEKVKKGGAFDLNDFRDQLAQMKKIGGLSMLIKKLPA
QFYRAASNTDMSQAEKHIRRMESIITSMTPAERIKPELIKASRKRRIANGSGVQIQEVNR
MLNQFEQMRGMMKKLHSGSCPKIMREMMGISPTRR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaacctaacacaacgtatgacgcgcgtcataaagacgctacgcggcgaagct
cgacttaccgagtcaaacacgcaagaaatgctacgtatggtgcgcctagcgctgcttgaa
gcagacgttgccctgccagtagtctgcgaatttgttacaaagatccgtgaaaaagcactc
ggtgaggaggtaattagcagttttacgccaggacagatgctagtaaatattgttcaacgc
gaactgaccgcattgattggtggacactatgatagcaaggctgctgaactgcatctagcg
gttataccgccagccgtaatcttaatcgtgggccttcagggctccggtaaaactacgacg
gtcggaaagttggctaaacttctgcatgagaagcagaacaagaaggtcctcacggtatcg
tgcgatgtatacaggcctgcagcaattgcacagctaaaaattgttaccgagcaaatcggc
gcggatttttttccatctcaacaagatcaaaacccactagatattgcacaagatgcatta
gactgggctaagcggcactattatgacgtattgcttatagacacagcaggccggcttggt
atcgatgatagaatgatgcaagaaatcgctcagttaaacgcgaagcttaagccagcagaa
gtactattcgttattgatgcaatgctcggtcaagacgcaattaatactgcaaagtctttc
aatgacacactacagcttactggtattgtactaacaaagcttgacggtgactcgcgcggg
ggggcggcgttgtcaacaagatatataactggacaaccaattaagtttattggtgtgggt
gaaaagcttgaagacctagaaatattctatcctgaacggatagccaacagaatcctaggt
atgggagatatcttaggactagtagagcaggcagagcaaaatgtggatatacagtccaca
cacagtctagccgagaaggtcaagaaaggaggtgctttcgacttgaatgatttccgcgat
caactagcacaaatgaagaaaatagggggcttatcaatgctaataaaaaaattgccggcc
caattttatcgggctgccagcaatactgatatgtctcaagctgaaaaacacatacgccga
atggaaagcattattacgtcgatgacgccggctgagcgcataaaaccagaattaatcaaa
gcaagccggaagcgccgcatcgcgaatggttccggggtgcaaatacaggaggtaaaccgg
atgttaaaccagtttgaacaaatgcggggcatgatgaaaaaactgcacagcggcagttgt
cctaaaataatgcgcgaaatgatgggcatatcacctacgcgtcgctaa
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