Candidatus Vallotia laricis: GKR41_00224
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Entry
GKR41_00224 CDS
T07905
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
vla
Candidatus Vallotia laricis
Pathway
vla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GKR41_00224 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vla03400
]
GKR41_00224 (xseA)
Enzymes [BR:
vla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GKR41_00224 (xseA)
DNA repair and recombination proteins [BR:
vla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GKR41_00224 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UDG82872
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All DBs
Position
285673..287190
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AA seq
505 aa
AA seq
DB search
MFNASVSTQMSGVTRRPSIGIARVIYSRPTASVWRGHLIILMTVKPSSAIPVVNPDVVMP
VSDLNQAIGTLLGRTFSLVWISGEVSNFTRAVSGHWYFSIKDDYAQIRCVMFRGRAQYVQ
PIPREGDRIEVRATVAIYEPRGELQLNVESVRHTGQGRLYEAFLKLKTQLETEGLFTASR
KRALPAHPRAIGIITSPQAASLRDVLITLARRAPHVSIIVYPTQVQGTEAASRVASVINI
ANRRAEVDVLILCRGGGSIEDLWAFNDELLARAIASSTLPIVSGVGHETDFTIADFTADI
RAPTPTAAAELVSAHRTVLLHELINCREALGSGFWRMMERRAQYLDSISCRLVSPSEQIA
IQFRHLRQVSLRLCLAGAQPARDARARLTMVLLRWQFRRPDIDRAAERIHRLRHSLFIAF
YRQNEHRNLQVYELSTRIELLSPRRTLDRGYAALIDLHSGKAVYTPDALKAGQRITVHLA
QGSVDLSIMHIQLRLNDEFYIRSEK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgcgtcggtgtcgacacaaatgtcgggtgtaacacgaagaccgagtattggc
atagcgcgcgtgatatatagccgccccaccgcatcagtgtggcggggacacctcattatt
ctcatgacggtaaaaccttcctctgcaattcctgttgttaatcctgacgtggtgatgcct
gtgtctgatttgaatcaggctattggcaccttacttggacgtacattttcgctcgtctgg
atttccggtgaagtctcgaattttacgcgggcagttagtggtcattggtatttctccatc
aaagacgattatgcacagattcgttgtgtaatgttccgcggtcgcgctcagtatgtacag
cctataccgcgtgaaggcgaccgaatcgaggttcgtgctacagtcgcgatctacgagcca
cgcggagagttgcaactcaacgtggagtcggttaggcacactgggcaaggccgtctgtat
gaagcgtttctaaaactgaagactcagcttgagacggagggtctattcaccgctagccga
aaacgcgcattgccggcgcacccgcgcgctattggtattattacatcgccacaagcagca
tcgctgcgggatgtattaatcacgctcgcacgacgtgcgccgcatgtttcgattatcgtc
tacccgacgcaagtacaaggcaccgaagcggcttcccgtgttgcgtcagtaattaacata
gctaaccgccgcgctgaagttgatgtgctgatcttgtgccgcggtggtggttctattgaa
gacttatgggctttcaatgacgaattactcgcaagggcaattgcctcgagcacactaccg
atcgtatctggtgtcgggcatgaaactgatttcacgattgcagacttcacagctgatatc
cgcgcaccaacaccaacagctgcagcagaactagttagcgctcatcgtaccgtgctatta
cacgagttaatcaattgccgcgaggctttaggcagcgggttctggcgaatgatggagcgt
cgtgctcaatacttagactcaatttcgtgccgccttgtcagcccttccgagcagattgct
atacagtttcgacacttacggcaggtttcactgcggctatgtttggccggcgcgcagccg
gcgcgagatgcgcgagcgcgtctgaccatggttctattacgctggcaattcaggcggcca
gatatagatcgggcagctgaacgcatacatcggctccgacatagcttattcattgcattc
tacaggcagaatgagcaccgaaatttgcaagtatatgaattatcaacccgtatcgagtta
cttagcccgagacgtacgctggaccgtggctatgctgcgttaatcgacctacacagcggc
aaagcggtgtatacaccggatgcgctcaaagcaggtcaacgaatcacagtacatcttgcg
cagggcagtgtagatcttagtattatgcacatacagcttcgtctaaatgatgaattttat
atcagatcggagaagtag
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