Candidatus Vallotia lariciata: GKR41_00317
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Entry
GKR41_00317 CDS
T07905
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vla
Candidatus Vallotia lariciata
Pathway
vla00020
Citrate cycle (TCA cycle)
vla00190
Oxidative phosphorylation
vla00650
Butanoate metabolism
vla00720
Other carbon fixation pathways
vla01100
Metabolic pathways
vla01110
Biosynthesis of secondary metabolites
vla01120
Microbial metabolism in diverse environments
vla01200
Carbon metabolism
Module
vla_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vla_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vla_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GKR41_00317 (sdhA)
00650 Butanoate metabolism
GKR41_00317 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
GKR41_00317 (sdhA)
00720 Other carbon fixation pathways
GKR41_00317 (sdhA)
Enzymes [BR:
vla01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GKR41_00317 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
FAD_binding_3
Thi4
HI0933_like
Pyr_redox_2
GIDA
FAD_oxidored
NAD_binding_7
Pyr_redox_3
NAD_binding_8
Lycopene_cycl
DUF5745
ThiF
Motif
Other DBs
NCBI-ProteinID:
UDG82955
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Position
418865..420673
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AA seq
602 aa
AA seq
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MLHRFFGEFKGMVVIKSSLLCRKFDVVIVGAGGSGMRASLQLAKAGLSVAVLSKVFPTRS
HTVAAQGGIGASLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCREATGAVYELEHLGM
PFDRNPDGTIYQRPFGGHTVNYGEKPVQRACAAADRTGHALLHTLYQQNVRAKTHFFIEW
MALDLIRDVEGDVLGVTALEIETGDLYILEGKCTLFATGGAGRIFNASTNAFINTGDGLG
MAARAKIALQDMEFWQFHPTGVAGAGVLITEGVRGEGGILRNVNGERFMERYAPILKDLA
PRDFVSRSMDQEIKEGRGCGANKDYVLLDLSHIGPETIMKRLPTIREIALKFANVDAIKE
PIPVVPTIHYQMGGIPTNIHGQVIGTSKGHEDPVNGFYAVGECSCVSVHGANRLGTNSLL
DLVVFGRAAGNHIIKCAKEVKEHKPLPIDAGDLAISRLDKLKVSSSGEYTHAVAADIRKT
MQQYAGVFRTSKLLTEGIDKIRAVCARANDVHLKDKSKVFNTACVEALELSNLIEVARAT
LVSAEARKESRGAHAHSDYERRDDENWLCHTLWFSEGDRLEYKPVHMKPLTVDPVPPRPR
TF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacagattctttggagagtttaagggcatggttgtaatcaagagttcgctgtta
tgtcgcaaattcgatgtggtaattgtcggggcgggaggctctgggatgcgcgcatcgtta
caactcgcgaaggctggtttgtcggtcgccgtactctctaaagtattcccgactcgctcg
cacacagtagccgcacaaggtggcatcggtgcatcacttggaaacatgagtgaagataac
tggcattaccatttttacgacacgattaagggctcagactggcttggagatcaagatgct
atcgagtttatgtgccgtgaggcaacgggcgcggtatacgagcttgagcacttaggcatg
ccgttcgaccgcaatccggatggaacgatttatcaacgcccattcggaggccataccgtg
aactatggtgaaaaaccggtgcaacgtgcttgcgcggctgcagatcgtactggccacgca
ctactgcatacgctgtaccagcagaatgtacgagctaaaacgcatttcttcatcgaatgg
atggcgctagaccttattcgcgacgtagagggcgatgtgcttggcgtgactgcgctcgag
atagaaactggtgacctttacattttagagggtaagtgtacgttgtttgcaaccggagga
gccggacgcatctttaatgcctcaactaacgcctttattaatactggcgacggcttaggg
atggctgcacgggcaaaaatcgcgctgcaggatatggaattctggcagttccatccgact
ggcgttgctggtgctggagtactaattacggaaggggtacgcggcgagggcggtattctt
cgaaatgtaaacggcgagcgcttcatggaacgctatgcgccgatactaaaagatctagcg
ccgcgtgactttgtatcccgatcaatggatcaggaaatcaaagaagggcggggctgtggc
gcgaataaagactatgtactgttagatttatcgcatattggcccagagacgattatgaag
cgtcttccgacgattcgtgagattgctctgaagtttgcaaacgttgatgcgattaaagaa
ccgatcccggttgtgccgactatccattaccagatgggtggcattcccacaaacattcat
ggccaagttattggcacatcaaaaggacatgaagatccggtcaacggtttctatgcggtc
ggagaatgctcatgcgtatcagtccatggcgcaaaccgacttggtactaactcgttgtta
gatctcgttgtatttggccgagcagctggaaatcacattatcaagtgcgcgaaagaagta
aaggagcataaaccgctcccgatcgacgccggagatcttgctatatcgcgtctggataag
cttaaggtctcctcgtctggcgagtacacccacgcagtggctgcagacatacgaaagacc
atgcagcagtatgcgggcgtgttccgaacctctaaactgctgactgaaggtatcgacaaa
attcgcgctgtatgcgcgcgtgctaacgatgtgcatctaaaagataagtccaaagtgttc
aacactgcgtgtgttgaagcgcttgagctatctaacttaatcgaagtcgctcgtgcgaca
ttagtatcagccgaagcgcgtaaggaaagccgaggcgcgcatgctcatagtgactatgag
cgacgtgatgatgaaaactggctgtgtcatacgctgtggtttagcgaaggcgatcgtcta
gaatacaaaccagttcacatgaaaccattaacagttgacccagtcccccctagaccacgg
actttctaa
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