Candidatus Vallotia lariciata: GKR41_00318
Help
Entry
GKR41_00318 CDS
T07905
Symbol
sdhB
Name
(GenBank) Succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
vla
Candidatus Vallotia lariciata
Pathway
vla00020
Citrate cycle (TCA cycle)
vla00190
Oxidative phosphorylation
vla00650
Butanoate metabolism
vla00720
Other carbon fixation pathways
vla01100
Metabolic pathways
vla01110
Biosynthesis of secondary metabolites
vla01120
Microbial metabolism in diverse environments
vla01200
Carbon metabolism
Module
vla_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vla_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vla_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GKR41_00318 (sdhB)
00650 Butanoate metabolism
GKR41_00318 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
GKR41_00318 (sdhB)
00720 Other carbon fixation pathways
GKR41_00318 (sdhB)
Enzymes [BR:
vla01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GKR41_00318 (sdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer4_17
Fer4_7
Fer4_9
Fer4_16
Fer4_4
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
UDG82956
LinkDB
All DBs
Position
420704..421408
Genome browser
AA seq
234 aa
AA seq
DB search
MAKRIFEIYRYDPDKNAAPCMQTYELDLDSHYPMLLDALIKLKTIDETISFRRSCREGVC
GSDAMNINGKNGLACLTNLNELPNKIILRPLPGLPVVRDLICDFTEFFNQYYSIKPYLIN
DMPPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIAD
SRDQATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMLRRTV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtatttttgagatttaccgctacgatccagacaaaaatgccgcaccatgc
atgcagacatacgagcttgatctcgactcacactacccaatgcttcttgatgcgctaatt
aagcttaagacaatcgatgagaccatctccttccgccgatcatgccgcgaaggtgtttgc
ggttcggatgcgatgaatatcaatggcaaaaatgggctggcgtgcctaacgaatctaaac
gagttaccaaataagattattcttcggccattgcctggactaccggttgtgcgcgaccta
atttgtgattttacagagttctttaatcagtattattctatcaagccgtacttaattaat
gatatgccacccccggaaaaagagcgcttgcagtcgcctgaggagcgtgatgagctcgac
ggattgtacgagtgcatattatgtgcaagttgctcaacgtcatgccccagcttttggtgg
aacccagacaagtttgttggaccggcgggtttattgcaagcatatcgatttattgctgat
agccgagaccaggcaaccggagaacggctagataatctagaggatccatatcgtctattt
cgttgccacacgattatgaactgcgtcgacgtatgcccgaaggggctaaatccgacgaaa
gcgattggcaagattaaagagctaatgcttcgccggacagtctga
DBGET
integrated database retrieval system