Candidatus Vallotia lariciata: GKR41_00336
Help
Entry
GKR41_00336 CDS
T07905
Symbol
glyA1
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vla
Candidatus Vallotia lariciata
Pathway
vla00260
Glycine, serine and threonine metabolism
vla00460
Cyanoamino acid metabolism
vla00630
Glyoxylate and dicarboxylate metabolism
vla00670
One carbon pool by folate
vla00680
Methane metabolism
vla01100
Metabolic pathways
vla01110
Biosynthesis of secondary metabolites
vla01120
Microbial metabolism in diverse environments
vla01200
Carbon metabolism
vla01230
Biosynthesis of amino acids
vla01240
Biosynthesis of cofactors
vla04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GKR41_00336 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
GKR41_00336 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GKR41_00336 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GKR41_00336 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GKR41_00336 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GKR41_00336 (glyA1)
Enzymes [BR:
vla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GKR41_00336 (glyA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UDG82973
LinkDB
All DBs
Position
440535..441782
Genome browser
AA seq
415 aa
AA seq
DB search
MLDKTEQTIANGDPQIWQAIQNEHCRQEHHIELIASENYASPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEHLAIERIKHLFGAEVANVQPHSGSQANQGVFFALLKPGDTIMGM
SLAHGGHLTHGSPVNLSGQWFNAISYGLNKNEDIDYDAAEHLAHQHKPKLLIAGASAFSL
RIDFERLARIARSVGAYFMVDMSHYAGLIAAHVYPNPVPYADFVTTTTHKSLRGPRGGAI
LMKMEYEKAINASIFPGIQGGPLMHIIAAKAIAFKEALAPEFKIYQKQVINNARILAETL
IKRGLRIVSGRTESHMMLVDLRAKQITGKSAEVVLGSAHITVNKNSIPNDPEKPFITSGI
RIGSSAMTTRGFGLAQAEHIGNLIADVLDNPNNTETIECVREQVTKLTNQFPVYK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttagacaagactgagcaaactattgcaaatggcgatccgcagatctggcaggcgatt
cagaatgagcactgtagacaagaacaccatattgaactcatcgcgtcggaaaactatgcg
agcccagcagtaatggcagctcagggttctcaactgaccaataagtatgctgaaggatat
ccgggtaagcgctactatggcggctgcgaatatgtcgatgtagtcgagcacttggcgatc
gaacggatcaagcatctatttggcgcagaggtagcgaatgtacagccgcattcaggttca
caggccaatcagggggtattcttcgcgctccttaagccaggtgatacgattatgggaatg
agccttgcccacggtggccatcttacgcacggttcgccagttaatctatccggccaatgg
tttaatgctatcagctacggactaaataaaaacgaagatattgactatgacgcagccgag
catctcgcgcaccaacataagccaaagctgctaattgcgggtgcatcggcgttctctctg
cgcatcgacttcgaacgcttagcgcggattgcgaggtcagtcggagcttattttatggta
gatatgtcgcattatgcgggactaattgcggctcatgtatacccaaatcctgtgccatat
gctgactttgtaacaacaaccacacacaagagcttacgcggacctcgggggggtgcaatc
ttaatgaagatggaatacgaaaaagctattaatgcatcaatatttccaggcatccaaggt
ggtccattaatgcatataattgcagcaaaagctattgcatttaaagaagcgcttgcacca
gagttcaagatatatcagaaacaagtcataaataacgcgcgtatacttgctgaaactctc
attaagcgtggcttacgaattgtgtctggtcgaaccgagagccatatgatgctagtagat
ttgcgcgcaaaacagattacaggtaaaagtgcggaagttgtgttaggtagtgcacatatc
accgtgaataaaaattcaattccaaatgatcctgagaagccatttataactagtggtata
cgtattggctcttcggcaatgaccactcgtggtttcggattggcccaagccgagcatatc
ggcaatctgattgctgatgtactcgacaatccaaataataccgaaactattgaatgtgtg
cgtgagcaggttactaaactcacaaatcagtttccggtgtataagtag
DBGET
integrated database retrieval system
