Candidatus Vallotia laricis: GKR41_00357
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Entry
GKR41_00357 CDS
T07905
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vla
Candidatus Vallotia laricis
Pathway
vla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GKR41_00357 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vla01007
]
GKR41_00357 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vla03016
]
GKR41_00357 (lysS)
Enzymes [BR:
vla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GKR41_00357 (lysS)
Amino acid related enzymes [BR:
vla01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GKR41_00357 (lysS)
Transfer RNA biogenesis [BR:
vla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GKR41_00357 (lysS)
Prokaryotic type
Other AARSs
GKR41_00357 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UDG82991
LinkDB
All DBs
Position
complement(468802..470334)
Genome browser
AA seq
510 aa
AA seq
DB search
MADINPNTALISIDSDNNAIIAERRDKLRVLREQGIAYPNDFFPKNRAADLRSHFSNIDQ
SVLEKRSVNVSIAGRMMLKRIMGKASFATIQDGTGQIQFFITIANVGSDTYDAFKKWDLG
DIISTCGILFRTNKGELSVRCIELRLLSKNIRPLPDKFHGLSDQEIKYRQRCVDLIVTPE
TRKTFQVRTRIITSVRQFMTNASFMEVETPMLHPIPGGATAKPFITHHNALNMQMFLRIA
PELYLKRLIIGGFDRVFELGRNFRNEGVSPKHNPEFTMMEFYAAYTDYCWLMDFTEQLIR
KAALDAQGTLEISYQGHILNFSQPFHRLTITDAIKKYTPQYTDACLSNKDWLRAELCKLG
ADIHDVAPYNTDVSTLLLALFEETAEAQLWEPTYIVNYPVEVSPLARASDGAPGIAERFE
LFIAGREVANGFSELNDPDDQAMRFRKQAEQKNAGDEKAMYYDEDYIRALEYGMPPTGGC
GIGIDRLVMLLTDSRSIRDVILFPHLRRGD
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggccgatataaatcccaatactgcgctaattagtatcgacagtgataataacgcaatc
attgcggagcgcagagataagctgcgagtcttgcgcgagcaaggtatcgcatatccgaat
gatttttttcctaaaaatagagcggcagatctacgctctcacttttccaacattgatcaa
agcgtcctggagaagagatcggtaaatgtatcaattgctggccggatgatgcttaagcga
attatgggtaaagcaagctttgcaaccatacaggatgggaccggtcaaatccagtttttt
attaccatagctaacgtcggctcagatacctacgatgcatttaagaaatgggatctaggt
gatatcatctcgacgtgtggaatattattccggacgaataagggcgagctctcggtacgt
tgtatcgaactacggcttctgtctaaaaatattcgcccacttccggataagtttcatgga
ttgtctgaccaagaaataaaatatcgtcagcgttgtgtagatcttattgttacgccagag
acacgcaagacttttcaggttcgtacgcgtattatcacatcggtgcgtcaatttatgaca
aacgcaagttttatggaagtcgagacaccaatgctgcatccgatcccgggcggcgcgaca
gccaagccgtttatcacgcatcacaatgccctaaacatgcaaatgtttctccgtattgca
ccggagttatacctaaaacgactaattattggcgggtttgaccgtgtctttgaacttggc
cgtaactttcgtaacgaaggagtctcacctaagcacaatccagaattcacgatgatggaa
ttctacgccgcctatactgactattgctggctgatggacttcactgagcagttaatacgg
aaagcagcactagacgcgcagggtacactggagatttcttatcaagggcacatactaaat
tttagtcagccatttcatcgtttaacgattactgatgcaatcaagaagtatacaccacaa
tacactgatgcatgcctttccaataaagattggctacgtgccgaattgtgcaagcttggc
gccgatatacatgatgtagcgccgtataataccgacgtaagcactcttctacttgctctt
tttgaggaaaccgctgaagcccagctatgggagccaacttatatagttaactatccggtt
gaagtatcaccgcttgcccgagcttcagacggagcccccggtattgctgagcgctttgag
ctattcattgcgggccgcgaggtagcaaatggattctcggaattaaatgatccggatgat
caagcaatgcgctttcgcaagcaagcggagcagaaaaatgctggtgatgagaaagcaatg
tattatgatgaagactacatccgcgcactggagtatggcatgcctccaacgggagggtgc
ggaattggtattgatcgacttgtaatgttactaactgatagtcggagtattcgcgacgtt
atcctgtttccgcaccttcggcgcggagattaa
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