Candidatus Vallotia laricis: GKR41_00531
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Entry
GKR41_00531 CDS
T07905
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
vla
Candidatus Vallotia laricis
Pathway
vla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GKR41_00531 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vla03400
]
GKR41_00531 (xseB)
Enzymes [BR:
vla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GKR41_00531 (xseB)
DNA repair and recombination proteins [BR:
vla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GKR41_00531 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
UDG83145
LinkDB
All DBs
Position
complement(710069..710341)
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AA seq
90 aa
AA seq
DB search
MPNTPAKAHNEADIPLPDNYETALSELESLVEQMEGGALSLELSLAAYRRGVALVAYCQQ
QLKRVEQQVCILDGESLKPIHSAADDGECA
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatactcccgctaaagcccataatgaggcagatatcccattaccggataattac
gaaacagcacttagtgaacttgagtcattggttgagcagatggaggggggtgcattaagc
cttgagctatcgctagcggcatatcgtcgaggtgtagcgctagtcgcatattgtcagcag
cagctgaaacgagttgagcagcaggtttgcatacttgatggtgaatcacttaagcctatc
cattcagcggccgatgatggagaatgtgcgtga
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