Candidatus Vallotia laricis: GKR41_00536
Help
Entry
GKR41_00536 CDS
T07905
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vla
Candidatus Vallotia laricis
Pathway
vla03420
Nucleotide excision repair
vla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GKR41_00536 (uvrD)
03430 Mismatch repair
GKR41_00536 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vla03400
]
GKR41_00536 (uvrD)
Enzymes [BR:
vla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GKR41_00536 (uvrD)
DNA repair and recombination proteins [BR:
vla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKR41_00536 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GKR41_00536 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UDG83150
LinkDB
All DBs
Position
complement(719090..721456)
Genome browser
AA seq
788 aa
AA seq
DB search
MSDLLANLNLEQYAAVTLPNEPALILAGAGSGKTRVLITRIAWLISCGEANAADILAVTF
TNKAAREMLMRLDVILPINTHNMWIGTFHGLCNRMLRTHYQDAGLPQAFQILDSADQLVA
IRRLIKSLNVDDEKYPAKNLQYFINNAKEQSLRPKDVDASDNYNRKWVDLYSAYDQQCQR
EGVVDFSELLLRSYELLQHNSTLRSYYQSRFRHILVDEFQDTSKLQYAWIKLLAGERNGI
FAVGDDDQSIYAFRGANAGNMFDFEREFNVRHLIKLEQNYRSHGNILDAANTLIAHNSKR
LGKNLRTNACHGKPVHAYKATTDSQEAGWIAKEVRALIDTGLSPDEIAILYRSNAQSRVV
EHVLVNSGITYRVYGGLRFFERQEVKHALAYLRLIINSSDDTAFDRVVNFPARGIGTRSL
EQLSKTARIHNCSMLQAVPYVTGRAGQLLGKFLALIEQINNETRSMSLPEMVNTVIKLSG
LEKFYSNDPENLGRIENLRELVNAAGAFVIEEGYGPVSAYSMSFSFTAKLHKSMQGVDND
NEQVRADALSVDGSQQNYNYITPISGFLSHASLEAGDNQANSTKNVVQLMTVHAAKGLEF
VAVFVTGLEEGLFPHESSVTKQNGLEEERRLMYVAITRAKEFLYLSFSQSRMLHGKTRYS
VRSRFFNELPARVLRWIQPRPDSLRQRHCTGLGNSSGLRGGDWLACDRRQKNHFTDTRLD
NSTMPMLCDQKDDIQSAFQIGAAVFHKKFGEGRITELEGDGENAKACVSFKRYGTKWLVL
TIAKLQSV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgatttacttgctaatctcaatctagaacaatatgcagcagtaacgctgccgaac
gaaccggctttgattctagccggcgctggcagcggaaagacgcgtgtacttattactagg
attgcatggttgatttcatgtggcgaagcgaatgctgctgatattttagctgttaccttc
acgaacaaagcggctcgtgaaatgttaatgcgattggatgtaatactgccaattaataca
cacaacatgtggattggaaccttccatggactatgtaaccggatgctgcgcacgcattat
caggatgccggtttgccacaagcctttcagatcttagactcggcagaccaattagtggca
atcaggcggttgataaaaagcctaaacgttgacgacgagaaatatcccgcaaaaaatctt
cagtactttattaataatgcgaaagagcaaagtttaaggcccaaagatgtcgatgctagc
gataactacaatcgcaagtgggttgatctgtattctgcctacgatcaacaatgtcaacgc
gaaggagtcgtcgatttttcagaattgttattgcgctcgtacgagctgctacaacataat
tcaactctacggtcatattaccagtcccgtttccggcatattctagttgatgagttccag
gatactagcaagcttcaatatgcgtggataaaacttctagctggagagcgtaatggaata
ttcgcagttggagatgacgatcagtcaatttatgccttccgtggcgccaatgcgggtaat
atgtttgacttcgaacgtgagtttaatgttcggcacttgattaagcttgagcagaattat
cgttcacacggcaatattctcgacgcagctaatacgctgatcgcacataactcgaaacgg
ctcggcaagaacttgcgtacgaatgcttgtcacggaaaaccagtgcatgcttataaggca
acgactgattcacaggaggccggttggattgcaaaagaagtgcgagctcttatcgatacg
ggattatcaccagacgagattgcaattctatatcgcagcaacgcgcagtcacgcgtggtc
gaacatgttctggtcaattctggaattacatatcgtgtatacggtggcctacgttttttc
gagcgtcaagaggttaaacatgctcttgcctaccttcggctgattattaattcgagtgat
gatactgcgtttgatcgggtggttaattttccagcccgtggcattggtacgcgctcgctc
gagcaactatccaaaactgcgcgtatacacaattgctctatgctacaagcagtcccgtat
gtgacaggcagggccggccaattattaggcaagtttcttgcgttgattgaacagataaat
aatgagacccgctctatgagcttgccagagatggttaatacagtaattaaactgagcggg
ttagaaaaattctactctaatgatccagaaaatctgggtcgcatcgaaaacttgcgggaa
ctggttaatgcagctggcgcattcgtgattgaggaaggttatggtcccgtgtccgcatac
tcgatgtcattttcgttcacagctaagctccataagtctatgcaaggagtagacaatgat
aacgagcaagtcagggcggatgcgctaagtgtcgacggatcccagcagaattacaactat
ataacgccaatttctgggttcttgtcacatgcatcacttgaggctggtgataatcaggcc
aattctacgaagaatgtagttcaattgatgacggtacatgctgctaagggacttgagttt
gtagccgtttttgtcactggacttgaggagggtttgtttccacatgaaagtagcgtaaca
aaacagaatgggctagaagaagagcgtcgtctcatgtatgttgcaatcacgcgcgccaaa
gaatttctttatctatcattctcccaaagtcggatgttacatggaaaaacacgttacagt
gtacgttctcgattttttaatgaattacctgctagagttttgaggtggattcagcctaga
ccggacagtctacgtcagaggcattgcaccggtttaggtaacagctctggattaaggggg
ggtgattggcttgcctgtgataggcggcagaaaaaccattttactgatacccgtcttgat
aattcaacgatgccaatgttgtgtgatcagaaagatgatatacaaagtgcttttcagatc
ggtgcagctgtattccataagaaatttggagaaggcaggatcaccgaactagaaggagat
ggcgaaaacgcaaaagcttgtgtttcatttaagcgatacggtacaaagtggcttgttctc
acaatcgcgaaattacaatcagtgtaa
DBGET
integrated database retrieval system
