Candidatus Vallotia laricis: GKR41_00567
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Entry
GKR41_00567 CDS
T07905
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
vla
Candidatus Vallotia laricis
Pathway
vla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GKR41_00567 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vla03400
]
GKR41_00567 (recO)
DNA repair and recombination proteins [BR:
vla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GKR41_00567 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GKR41_00567 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
UDG83178
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All DBs
Position
complement(764819..765688)
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AA seq
289 aa
AA seq
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MSHPDKVQPHASEADDIVPMSISNDLTQQSPVSCTVLPPICRTASSHSDYRMADQLGFVL
HTHPYRETSLIIDAFTRSHGRLALLAKGAKRPYSALRGVLQTFQPLGLSWAGKSEMRTLT
KAEWIGGMRPLAGDALLYGFYVNELLVRFCAQEDPYTVLFDHYLLTLTRLADQEPAVQVL
RSFELLLLRETGFASSLDRTVTRQSVVTGRSYVFDPERGLYDVDMLESQKDTFRSPVIAG
QTLLDMERDDYSRAQTIAQSKVLMRFLLNTYLGNTPLATRHVLIDLQNL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatccagataaagtccaacctcatgctagcgaagcggatgatatcgttccaatg
tcgatatcaaatgatcttacacaacagtccccagtaagctgtactgttctgccccccatt
tgccgcactgcttcatcgcattcagattatcgtatggctgatcagttaggcttcgtgtta
cacacccacccttatcgagaaacgagtcttattatcgatgcgtttacccgctcacacggt
cgtcttgcacttcttgcgaaaggagctaaaagaccatattcagcgttgcgcggcgtgctg
caaacattccagccacttgggttgtcatgggccggaaagtcggaaatgcgtactctcact
aaagccgaatggattggcggtatgcgaccgcttgctggcgacgcattactatatggcttt
tatgtcaatgagttgcttgttagattttgtgcacaggaagatccgtatactgtgttattt
gatcattacttgttaacgttgacacggcttgccgatcaagaaccagctgtgcaagtattg
cgctcgtttgagcttctcttgctgcgtgagaccggctttgcctcgtcacttgatcggacc
gtgacaaggcaaagtgttgtaactggtcgatcatatgtgtttgatccggagcgcggttta
tacgatgtagacatgctagagtcccagaaggatacatttcgaagtccagtcattgccgga
caaacgctgctcgacatggagcgcgatgattattctcgtgcgcaaactattgcgcaaagt
aaagtcttaatgcgttttttgttaaatacgtatcttgggaatacgccgcttgctacgcgc
catgtcttaatcgaccttcaaaatttatga
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