KEGG   Candidatus Vallotia laricis: GKR41_00569
Entry
GKR41_00569       CDS       T07905                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
vla  Candidatus Vallotia laricis
Pathway
vla03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vla00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    GKR41_00569 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vla03019]
    GKR41_00569 (rnc)
   03009 Ribosome biogenesis [BR:vla03009]
    GKR41_00569 (rnc)
   03036 Chromosome and associated proteins [BR:vla03036]
    GKR41_00569 (rnc)
Enzymes [BR:vla01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     GKR41_00569 (rnc)
Messenger RNA biogenesis [BR:vla03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GKR41_00569 (rnc)
Ribosome biogenesis [BR:vla03009]
 Eukaryotic type
  90S particles
   RNase
    GKR41_00569 (rnc)
 Prokaryotic type
  rRNA processing factors
   GKR41_00569 (rnc)
Chromosome and associated proteins [BR:vla03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     GKR41_00569 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 RM44_endonuclase dsrm DND1_DSRM AGK_C DSRM_2 WH_DRP
Other DBs
NCBI-ProteinID: UDG83180
LinkDB
Position
complement(766711..767799)
AA seq 362 aa
MSLSPLESRLHYEFRNAELLRQAITHRSYSATHNERLEFLGDSILNCVVAALLFQRFNKL
DEGDLSRVRAHLVKEHSLYEIAQTLNISEVLRLGEGEFRSGGFRRPSILADTFEALLGAI
FLDGGFYQVQAVIKRLYAPILDKINPCILGKDAKTLLQEYLQSHKIALPRYAIIAIAGAA
HKQQFEVECAVPKLDIRVFGTGVSRRTAEQTAASKALEKMITIAPHLLSKLKRLQETEPL
AYLEPKSAQLRSSGMKRTLNVTSVLGRKAKRLEKLSGQVMQAMRPSSYDHKFESSVVNQD
AVSIMTNNKGLTVVRASDVLLTKVAPAITTTTALDISTELPQVLHEIPDIEPHLPHLADF
SI
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgtctttgtcaccgctggaaagccgactgcactatgaattccgtaatgcggaattgttg
cggcaggctataacccaccgaagctatagtgctacgcataatgaacgacttgaattcctc
ggagattcgattctcaactgcgtagtagccgcccttttatttcaacgttttaacaagctt
gacgagggcgatttgtctcgagttcgggcacacttagttaaggaacactccctatacgag
attgctcagacgctcaatatttcggaggtattacggcttggtgagggagagtttcgtagc
ggcggattccgacggccatcaattttagccgacacgtttgaggcactactaggcgcgatt
tttttagatggaggattttaccaagttcaagccgtaattaagcgattatatgcccccatt
ttagacaaaattaatccatgtatcttaggtaaagatgctaaaacactattgcaggagtat
cttcagagccataagattgctttaccgcgctatgcaataatcgcgattgcgggtgctgct
cataaacaacaatttgaggttgagtgtgcggttcctaagctcgacattagggttttcggt
actggtgttagtcgacgcactgctgagcagactgctgcaagtaaggcactcgaaaaaatg
ataacgatagcgccacacctgctcagcaagctaaaacgtcttcaggaaacagaacccctt
gcttatctagagcctaaaagcgcacagctgcgcagctctgggatgaagagaacactaaat
gttactagcgtgttgggccgtaaagctaagcgtctagaaaagctatcaggacaagtaatg
caagcaatgcggccatcaagttatgaccataagttcgagagtagcgtagtgaaccaggac
gctgtctcgattatgactaataataaaggtctcactgtggtcagagcatctgatgtctta
ttgacgaaggtagctccagccattactacgactactgcgcttgatatatctaccgagctg
cctcaggtgcttcatgagatacctgatatagaacctcatttgccgcacctggcagatttt
agtatttga

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