Candidatus Vallotia laricis: GKR41_00604
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Entry
GKR41_00604 CDS
T07905
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
vla
Candidatus Vallotia laricis
Pathway
vla03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
GKR41_00604 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vla03011
]
GKR41_00604 (rpsA)
Ribosome [BR:
vla03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
GKR41_00604 (rpsA)
Bacteria
GKR41_00604 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
UDG83214
LinkDB
All DBs
Position
complement(813316..815082)
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AA seq
588 aa
AA seq
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MAAGDYKAEPNYAPFDFMSDLQTSNPNIESFAALFEESLTRQDMRAGEVISAEVVRVDHN
FVVVNAGLKSEAYIPIEEFLNDQGEIEVQEGDFVSVAIDALENGYGDTVLSRDKAKRLAS
WLSLEKALDNNELVTGTVTSKVKGGMTVMVNGIRAFLPGSLVDTRPVKDTTPYEGKTLEF
RVIKLDRKRNNVVLSRRAVIEATQGEERAKLLETLMEGAILNGIVKNITDYGAFVDLGGI
DGLLHITDIAWRRVRHPSEVLSVGQEVTAKILKFDQDKNRVSLGIKQLGDDPWEGISRRY
PSGTRLFGKVTNITDYGAFVEVESGIEGLVHVSEMDWTNKNVAPSKVVQLSDEVEVMVLE
IDEARRRISLGMKQCKPNPWDDFSRNFKKGDKISGAIRSITDFGVFIGLPGGIDGLVHLS
DLSWSESGEEAVRKYKKGDEIEAVVLGIDVEKERISLGIKQLEGDPFNNFVALNDKGSIV
NGTVKIIDPKGVVIQLSAEVEGYLRLSEIAQDRVENARNMLQKGDKVNAMIINIDRKSRG
IHLSMKVKDSPEQQQAMRGLQVDSSVAASGTTNFGALLKAKLDGQQNQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtggccgccggcgattataaagccgagcctaactatgcgccattcgattttatgtctgac
ctgcaaacttctaatccgaatatcgaatcttttgcggctctctttgaggagtcgttaacc
cgtcaggacatgcgtgcaggcgaagtaatctctgctgaggttgtgcgtgttgaccataat
ttcgtagtcgttaacgctggtttaaagtctgaagcttacattccgatcgaagagttttta
aacgatcagggtgaaattgaggttcaagaaggtgattttgtatcagtcgcgattgatgct
cttgagaatggttatggcgatacggttctatcacgtgataaagctaagcgtcttgcttcg
tggctttcgcttgaaaaagcactagataacaatgagctagtgaccggtacggtcactagt
aaagttaaaggcggaatgactgtaatggtcaatggcattcgtgcgttcttacctggatct
ctagttgacacccgcccggtaaaagacacgactccgtatgaaggtaaaacactcgagttt
cgcgtgataaagctggatcgtaaacgcaataacgtcgtgctgtcacgacgtgcggttatt
gaagccacgcaaggcgaagagcgtgcgaagctcctcgagacattaatggaaggcgcaatc
ctcaatggcatcgtgaaaaatatcactgattacggcgcatttgttgatctcggtggtatc
gacggcttgctacatattaccgatatcgcgtggcgtcgtgtacgtcacccgagtgaagtg
ctctctgtgggccaagaagtaactgcaaagattttaaagtttgatcaagataaaaatcgt
gtttcgcttggcattaaacaactcggcgatgatccctgggaaggtatttctcgtcgctat
ccgtcaggtacaagactatttggtaaggtcacaaatattaccgactacggtgcattcgtc
gaggttgagtcgggtatagaaggtctagtacatgtatctgagatggactggactaataag
aatgtggcaccaagcaaagtagtacagcttagcgacgaagttgaggttatggtgctggag
attgatgaagctcgacgacgtattagtctcggcatgaagcaatgtaaaccaaacccctgg
gatgattttagtcgaaactttaagaaaggcgataagatttctggcgcaattagatcaatt
actgattttggtgtgtttattggactgccgggggggattgatggcctcgtacacttatca
gatttatcgtggagcgaatctggtgaagaggcagttagaaaatataagaagggggatgaa
attgaggctgtagtgcttggtatcgatgtcgagaaggagcgcatctcgctaggcattaag
caattagagggcgatccatttaataacttcgttgccttaaatgataagggctctatagtc
aatggtactgttaaaattattgatccaaaaggagttgtgattcagttgagcgctgaagtc
gagggttatttacggttgtcagaaatagcgcaagaccgtgtagagaatgcgcgtaatatg
ctccagaaaggtgacaaagttaacgcaatgattattaatattgatcgtaagtcacgtgga
atccatctatcaatgaaagtaaaagattctccagagcaacagcaggcaatgcgtggcttg
caagttgatagtagcgtggccgctagtggtacaaccaattttggtgcgttgctcaaggcc
aagttagacggtcaacaaaaccagtaa
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